RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 ANO1Q5XXA6 986 aa13.13□□□□□ -0.31
NFKB1-205ENST00000505458 MAP3K14Q99558 947 aa13.13□□□□□ -0.31
NFKB1-205ENST00000505458 SPTLC2O15270 562 aa13.13□□□□□ -0.31
NFKB1-205ENST00000505458 TYRO3Q06418 890 aa13.13□□□□□ -0.31
NFKB1-205ENST00000505458 CHAF1AQ13111 956 aaPredicted RBP13.13□□□□□ -0.31
NFKB1-205ENST00000505458 SEC23AQ15436 765 aa13.13□□□□□ -0.31
NFKB1-205ENST00000505458 ADGRA1Q86SQ6 560 aa13.13□□□□□ -0.31
NFKB1-205ENST00000505458 FOXP1Q9H334 677 aaPredicted RBP13.13□□□□□ -0.31
NFKB1-205ENST00000505458 TNKSO95271 1327 aa13.13□□□□□ -0.31
NFKB1-205ENST00000505458 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
NFKB1-205ENST00000505458 USP25Q9UHP3 1055 aa13.12□□□□□ -0.31
NFKB1-205ENST00000505458 CEP131Q9UPN4 1083 aa13.12□□□□□ -0.31
NFKB1-205ENST00000505458 NAV1Q8NEY1 1877 aa13.12□□□□□ -0.31
NFKB1-205ENST00000505458 MYH6P13533 1939 aa13.12□□□□□ -0.31
NFKB1-205ENST00000505458 BMP15O95972 392 aa13.12□□□□□ -0.31
NFKB1-205ENST00000505458 IL1R1P14778 569 aa13.12□□□□□ -0.31
NFKB1-205ENST00000505458 FAM182BQ5T319 152 aa13.12□□□□□ -0.31
NFKB1-205ENST00000505458 IFIT1BQ5T764 474 aaKnown RBP13.12□□□□□ -0.31
NFKB1-205ENST00000505458 SDR42E1Q8WUS8 393 aa13.12□□□□□ -0.31
NFKB1-205ENST00000505458 TMX4Q9H1E5 349 aaPredicted RBP13.12□□□□□ -0.31
NFKB1-205ENST00000505458 DCP1AQ9NPI6 582 aaPredicted RBP13.12□□□□□ -0.31
NFKB1-205ENST00000505458 BAZ2AQ9UIF9 1905 aaKnown RBP13.12□□□□□ -0.31
NFKB1-205ENST00000505458 GOLGA6L6A8MZA4 724 aa13.12□□□□□ -0.31
NFKB1-205ENST00000505458 CTR9Q6PD62 1173 aa13.12□□□□□ -0.31
NFKB1-205ENST00000505458 TFCP2L1Q9NZI6 479 aa13.12□□□□□ -0.31
NFKB1-205ENST00000505458 CDC27P30260 824 aa13.11□□□□□ -0.31
NFKB1-205ENST00000505458 STX1AQ16623 288 aa13.11□□□□□ -0.31
NFKB1-205ENST00000505458 TXNRD1Q16881 649 aa13.11□□□□□ -0.31
NFKB1-205ENST00000505458 RILPL1Q5EBL4 403 aa13.11□□□□□ -0.31
NFKB1-205ENST00000505458 RNF214Q8ND24 703 aa13.11□□□□□ -0.31
NFKB1-205ENST00000505458 TIGD1Q96MW7 591 aa13.11□□□□□ -0.31
NFKB1-205ENST00000505458 SLC26A6Q9BXS9 759 aa13.11□□□□□ -0.31
NFKB1-205ENST00000505458 BRMS1Q9HCU9 246 aa13.11□□□□□ -0.31
NFKB1-205ENST00000505458 KIF5BP33176 963 aa13.11□□□□□ -0.31
NFKB1-205ENST00000505458 SLC39A14Q15043 492 aa13.11□□□□□ -0.31
NFKB1-205ENST00000505458 ILDR1Q86SU0 546 aaPredicted RBP13.11□□□□□ -0.31
NFKB1-205ENST00000505458 FSIP1Q8NA03 581 aa13.11□□□□□ -0.31
NFKB1-205ENST00000505458 NAT10Q9H0A0 1025 aaKnown RBP13.11□□□□□ -0.31
NFKB1-205ENST00000505458 FAM217BQ9NTX9 383 aaPredicted RBP13.11□□□□□ -0.31
NFKB1-205ENST00000505458 GUCY1B3Q02153 619 aa13.11□□□□□ -0.31
NFKB1-205ENST00000505458 SP8Q8IXZ3 490 aa13.11□□□□□ -0.31
NFKB1-205ENST00000505458 CRACR2BQ8N4Y2 399 aaPredicted RBP13.11□□□□□ -0.31
NFKB1-205ENST00000505458 TAOK2Q9UL54 1235 aa13.11□□□□□ -0.31
NFKB1-205ENST00000505458 LTBP1Q14766 1721 aa13.1□□□□□ -0.31
NFKB1-205ENST00000505458 MYH2Q9UKX2 1941 aa13.1□□□□□ -0.31
NFKB1-205ENST00000505458 POLRMTO00411 1230 aaKnown RBP13.1□□□□□ -0.31
NFKB1-205ENST00000505458 UFL1O94874 794 aa13.1□□□□□ -0.31
NFKB1-205ENST00000505458 CMA1P23946 247 aa13.1□□□□□ -0.31
NFKB1-205ENST00000505458 FAM163AQ96GL9 167 aaPredicted RBP13.1□□□□□ -0.31
NFKB1-205ENST00000505458 ANO10Q9NW15 660 aa13.1□□□□□ -0.31
NFKB1-205ENST00000505458 NOL7Q9UMY1 257 aaKnown RBP13.1□□□□□ -0.31
NFKB1-205ENST00000505458 MROH7-TTC4A0A0A0MT08 1334 aa13.1□□□□□ -0.31
NFKB1-205ENST00000505458 MMP1P03956 469 aa13.1□□□□□ -0.31
NFKB1-205ENST00000505458 GNAQP50148 359 aa13.1□□□□□ -0.31
NFKB1-205ENST00000505458 DYNLL1P63167 89 aaKnown RBP13.1□□□□□ -0.31
NFKB1-205ENST00000505458 ZRSR1Q15695 479 aaKnown RBP13.1□□□□□ -0.31
NFKB1-205ENST00000505458 AMIGO3Q86WK7 504 aa13.1□□□□□ -0.31
NFKB1-205ENST00000505458 CTCFLQ8NI51 663 aaPredicted RBP13.1□□□□□ -0.31
NFKB1-205ENST00000505458 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.1□□□□□ -0.31
NFKB1-205ENST00000505458 FAM205AQ6ZU69 1335 aa13.1□□□□□ -0.31
NFKB1-205ENST00000505458 USP17L12C9JPN9 530 aa13.1□□□□□ -0.31
NFKB1-205ENST00000505458 USP17L21D6R901 530 aa13.1□□□□□ -0.31
NFKB1-205ENST00000505458 PRPF3O43395 683 aaKnown RBP13.1□□□□□ -0.31
NFKB1-205ENST00000505458 NR1I2O75469 434 aa13.1□□□□□ -0.31
NFKB1-205ENST00000505458 PTMAP06454 111 aaKnown RBP13.1□□□□□ -0.31
NFKB1-205ENST00000505458 ELOA2Q8IYF1 753 aaPredicted RBP13.1□□□□□ -0.31
NFKB1-205ENST00000505458 CCDC34Q96HJ3 373 aa13.1□□□□□ -0.31
NFKB1-205ENST00000505458 AATFQ9NY61 560 aaKnown RBP eCLIP13.1□□□□□ -0.31
NFKB1-205ENST00000505458 RANBP6O60518 1105 aaKnown RBP13.09□□□□□ -0.31
NFKB1-205ENST00000505458 KLRK1P26718 216 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 PRDX5P30044 214 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 ALDH1B1P30837 517 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 USP5P45974 858 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 FOSBP53539 338 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 ENGASEQ8NFI3 743 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 ZNF384Q8TF68 577 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 ANKS1AQ92625 1134 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 HOOK1Q9UJC3 728 aaKnown RBP13.09□□□□□ -0.31
NFKB1-205ENST00000505458 PCDHA7Q9UN72 937 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 CUTAO60888 179 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 NPR1P16066 1061 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 PDE6BP35913 854 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 DGKHQ86XP1 1220 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 NOSTRINQ8IVI9 506 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 ENAHQ8N8S7 591 aaPredicted RBP13.09□□□□□ -0.31
NFKB1-205ENST00000505458 CD209Q9NNX6 404 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 TCP11L1Q9NUJ3 509 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 FAM237AA0A1B0GTK4 181 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 TRIM37O94972 964 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 GPSM2P81274 684 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.09□□□□□ -0.31
NFKB1-205ENST00000505458 MRVI1Q9Y6F6 885 aa13.09□□□□□ -0.31
NFKB1-205ENST00000505458 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.08□□□□□ -0.32
NFKB1-205ENST00000505458 COA1Q9GZY4 146 aa13.08□□□□□ -0.32
NFKB1-205ENST00000505458 CEBPZQ03701 1054 aaKnown RBP13.08□□□□□ -0.32
NFKB1-205ENST00000505458 NBPF11Q86T75 865 aa13.08□□□□□ -0.32
NFKB1-205ENST00000505458 FMR1NBQ8N0W7 255 aaPredicted RBP13.08□□□□□ -0.32
NFKB1-205ENST00000505458 ZKSCAN5Q9Y2L8 839 aa13.08□□□□□ -0.32
NFKB1-205ENST00000505458 DHX8Q14562 1220 aaKnown RBP13.08□□□□□ -0.32
NFKB1-205ENST00000505458 NUP133Q8WUM0 1156 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms