RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 ELP3Q9H9T3 547 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 AS3MTQ9HBK9 375 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 ZNF287Q9HBT7 754 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 HIP1O00291 1037 aa9.37□□□□□ -0.91
SKP2-203ENST00000504386 CXCL11O14625 94 aa9.37□□□□□ -0.91
SKP2-203ENST00000504386 POLR3DP05423 398 aaPredicted RBP9.37□□□□□ -0.91
SKP2-203ENST00000504386 ASNSP08243 561 aa9.37□□□□□ -0.91
SKP2-203ENST00000504386 PDE1AP54750 535 aa9.37□□□□□ -0.91
SKP2-203ENST00000504386 MFAP1P55081 439 aaKnown RBP9.37□□□□□ -0.91
SKP2-203ENST00000504386 ARHGEF6Q15052 776 aa9.37□□□□□ -0.91
SKP2-203ENST00000504386 GIMAP6Q6P9H5 292 aa9.37□□□□□ -0.91
SKP2-203ENST00000504386 MIGA2Q7L4E1 593 aa9.37□□□□□ -0.91
SKP2-203ENST00000504386 MAPKAPK5Q8IW41 473 aa9.37□□□□□ -0.91
SKP2-203ENST00000504386 OTUD5Q96G74 571 aa9.37□□□□□ -0.91
SKP2-203ENST00000504386 RIOK1Q9BRS2 568 aaKnown RBP9.37□□□□□ -0.91
SKP2-203ENST00000504386 LNPKQ9C0E8 428 aa9.37□□□□□ -0.91
SKP2-203ENST00000504386 DDX4Q9NQI0 724 aaKnown RBP9.37□□□□□ -0.91
SKP2-203ENST00000504386 SERPINB13Q9UIV8 391 aa9.37□□□□□ -0.91
SKP2-203ENST00000504386 TCRBV5S4A2TA0A5A2 114 aa9.36□□□□□ -0.91
SKP2-203ENST00000504386 DDTLA6NHG4 134 aaPredicted RBP9.36□□□□□ -0.91
SKP2-203ENST00000504386 MBD4O95243 580 aa9.36□□□□□ -0.91
SKP2-203ENST00000504386 FASTKD5Q7L8L6 764 aaKnown RBP9.36□□□□□ -0.91
SKP2-203ENST00000504386 ADGRA1Q86SQ6 560 aa9.36□□□□□ -0.91
SKP2-203ENST00000504386 PI4K2BQ8TCG2 481 aa9.36□□□□□ -0.91
SKP2-203ENST00000504386 CLMNQ96JQ2 1002 aa9.36□□□□□ -0.91
SKP2-203ENST00000504386 CFHR5Q9BXR6 569 aa9.36□□□□□ -0.91
SKP2-203ENST00000504386 OSBPL3Q9H4L5 887 aa9.36□□□□□ -0.91
SKP2-203ENST00000504386 CABP5Q9NP86 173 aa9.36□□□□□ -0.91
SKP2-203ENST00000504386 MCM9Q9NXL9 1143 aa9.36□□□□□ -0.91
SKP2-203ENST00000504386 ARPP21Q9UBL0 812 aaPredicted RBP9.36□□□□□ -0.91
SKP2-203ENST00000504386 SWAP70Q9UH65 585 aa9.36□□□□□ -0.91
SKP2-203ENST00000504386 SNCAIPQ9Y6H5 919 aa9.36□□□□□ -0.91
SKP2-203ENST00000504386 NDUFB9Q9Y6M9 179 aa9.36□□□□□ -0.91
SKP2-203ENST00000504386 DOCK2Q92608 1830 aa9.35□□□□□ -0.91
SKP2-203ENST00000504386 AK9Q5TCS8 1911 aa9.35□□□□□ -0.91
SKP2-203ENST00000504386 TESPA1A2RU30 521 aaPredicted RBP9.35□□□□□ -0.91
SKP2-203ENST00000504386 FOXN1O15353 648 aa9.35□□□□□ -0.91
SKP2-203ENST00000504386 SLC3A2P08195 630 aaKnown RBP9.35□□□□□ -0.91
SKP2-203ENST00000504386 CAP2P40123 477 aa9.35□□□□□ -0.91
SKP2-203ENST00000504386 DYNLL1P63167 89 aaKnown RBP9.35□□□□□ -0.91
SKP2-203ENST00000504386 PABPC4Q13310 644 aaKnown RBP eCLIP9.35□□□□□ -0.91
SKP2-203ENST00000504386 ERICH6BQ5W0A0 696 aa9.35□□□□□ -0.91
SKP2-203ENST00000504386 B4GALNT3Q6L9W6 998 aa9.35□□□□□ -0.91
SKP2-203ENST00000504386 CHRDL2Q6WN34 429 aa9.35□□□□□ -0.91
SKP2-203ENST00000504386 SH3BP5LQ7L8J4 393 aa9.35□□□□□ -0.91
SKP2-203ENST00000504386 METTL16Q86W50 562 aaKnown RBP9.35□□□□□ -0.91
SKP2-203ENST00000504386 IFNL1Q8IU54 200 aa9.35□□□□□ -0.91
SKP2-203ENST00000504386 CDAN1Q8IWY9 1227 aa9.35□□□□□ -0.91
SKP2-203ENST00000504386 ZFPM1Q8IX07 1006 aa9.35□□□□□ -0.91
SKP2-203ENST00000504386 ZKSCAN4Q969J2 545 aaPredicted RBP9.35□□□□□ -0.91
SKP2-203ENST00000504386 PALD1Q9ULE6 856 aa9.35□□□□□ -0.91
SKP2-203ENST00000504386 KCNH4Q9UQ05 1017 aa9.35□□□□□ -0.91
SKP2-203ENST00000504386 SLC4A4Q9Y6R1 1079 aa9.35□□□□□ -0.91
SKP2-203ENST00000504386 SALL3Q9BXA9 1300 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 CCL15-CCL14A0A0B4J2E2 113 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 USP17L5A8MUK1 530 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 PHF20L1A8MW92 1017 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 TRIM6-TRIM34B2RNG4 842 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 TRPA1O75762 1119 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 IGHDP01880 384 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 HSPA8P11142 646 aaKnown RBP9.34□□□□□ -0.91
SKP2-203ENST00000504386 PTPRAP18433 802 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 INPP5BP32019 993 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 MKRN3Q13064 507 aaKnown RBP9.34□□□□□ -0.91
SKP2-203ENST00000504386 CCL15Q16663 113 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 PPP4R3BQ5MIZ7 849 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 CENPQQ7L2Z9 268 aaPredicted RBP9.34□□□□□ -0.91
SKP2-203ENST00000504386 LCORLQ8N3X6 602 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 EDC3Q96F86 508 aaKnown RBP9.34□□□□□ -0.91
SKP2-203ENST00000504386 CCDC17Q96LX7 622 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 ZFYVE28Q9HCC9 887 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 DCP1AQ9NPI6 582 aaPredicted RBP9.34□□□□□ -0.91
SKP2-203ENST00000504386 HELLSQ9NRZ9 838 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 RNF186Q9NXI6 227 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.34□□□□□ -0.91
SKP2-203ENST00000504386 PNMA3Q9UL41 463 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 SLC45A1Q9Y2W3 748 aa9.34□□□□□ -0.91
SKP2-203ENST00000504386 C19orf81C9J6K1 198 aa9.33□□□□□ -0.92
SKP2-203ENST00000504386 IRF6O14896 467 aa9.33□□□□□ -0.92
SKP2-203ENST00000504386 GPAA1O43292 621 aa9.33□□□□□ -0.92
SKP2-203ENST00000504386 NT5C2P49902 561 aa9.33□□□□□ -0.92
SKP2-203ENST00000504386 LBX1P52954 281 aa9.33□□□□□ -0.92
SKP2-203ENST00000504386 USP14P54578 494 aa9.33□□□□□ -0.92
SKP2-203ENST00000504386 TSHZ3Q63HK5 1081 aa9.33□□□□□ -0.92
SKP2-203ENST00000504386 ANKRD23Q86SG2 305 aa9.33□□□□□ -0.92
SKP2-203ENST00000504386 PROCA1Q8NCQ7 364 aaPredicted RBP9.33□□□□□ -0.92
SKP2-203ENST00000504386 STRBPQ96SI9 672 aaKnown RBP9.33□□□□□ -0.92
SKP2-203ENST00000504386 PARK7Q99497 189 aaKnown RBP9.33□□□□□ -0.92
SKP2-203ENST00000504386 SH2D4AQ9H788 454 aa9.33□□□□□ -0.92
SKP2-203ENST00000504386 ARMT1Q9H993 441 aa9.33□□□□□ -0.92
SKP2-203ENST00000504386 DIAPH3Q9NSV4 1193 aa9.33□□□□□ -0.92
SKP2-203ENST00000504386 SAP30BPQ9UHR5 308 aaKnown RBP9.33□□□□□ -0.92
SKP2-203ENST00000504386 FZD1Q9UP38 647 aa9.33□□□□□ -0.92
SKP2-203ENST00000504386 ZHX2Q9Y6X8 837 aa9.33□□□□□ -0.92
SKP2-203ENST00000504386 APPP05067 770 aa9.32□□□□□ -0.92
SKP2-203ENST00000504386 TDO2P48775 406 aa9.32□□□□□ -0.92
SKP2-203ENST00000504386 IRX6P78412 446 aaPredicted RBP9.32□□□□□ -0.92
SKP2-203ENST00000504386 KIF22Q14807 665 aa9.32□□□□□ -0.92
SKP2-203ENST00000504386 TAF1CQ15572 869 aaPredicted RBP9.32□□□□□ -0.92
SKP2-203ENST00000504386 PKN2Q16513 984 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms