RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 CARD14Q9BXL6 1004 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 CSRNP2Q9H175 543 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 USP21Q9UK80 565 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 M0QZ92 97 aa8.02□□□□□ -1.12
SYNPO2-205ENST00000504178 FAM160A1Q05DH4 1040 aa8.02□□□□□ -1.12
SYNPO2-205ENST00000504178 CCDC26Q8TAB7 109 aa8.02□□□□□ -1.12
SYNPO2-205ENST00000504178 RSPH14Q9UHP6 348 aa8.02□□□□□ -1.12
SYNPO2-205ENST00000504178 USP19O94966 1318 aa8.02□□□□□ -1.12
SYNPO2-205ENST00000504178 IVLP07476 585 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 ALDH1B1P30837 517 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 TCIRG1Q13488 830 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 CCDC121Q6ZUS5 278 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 MAPKAPK5Q8IW41 473 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 CCT6BQ92526 530 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 APBA3O96018 575 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 ERCC5P28715 1186 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 PDE6BP35913 854 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 TPD52P55327 224 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 CALCRLQ16602 461 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 KRT25Q7Z3Z0 450 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 SMC5Q8IY18 1101 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 LZTS2Q9BRK4 669 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 TRIM7Q9C029 511 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 LGR6Q9HBX8 967 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 SNX14Q9Y5W7 946 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 STK10O94804 968 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 A1BGP04217 495 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 GCKRQ14397 625 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 EAPPQ56P03 285 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 CYP26C1Q6V0L0 522 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 LLPHQ9BRT6 129 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 VPS16Q9H269 839 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 SLC1A4P43007 532 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 MYCT1Q8N699 235 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 ANGEL1Q9UNK9 670 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 TBX22Q9Y458 520 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 V9GYY5 206 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 KDM5AP29375 1690 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 ZBTB7BO15156 539 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 PRDM1O75626 825 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 VAV2P52735 878 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 PAK1Q13153 545 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 NONOQ15233 471 aaKnown RBP eCLIP8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 CEP128Q6ZU80 1094 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 NAP1L3Q99457 506 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 TBC1D7Q9P0N9 293 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 VPS18Q9P253 973 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 ZNF532Q9HCE3 1301 aa8.02□□□□□ -1.13
SYNPO2-205ENST00000504178 ZMYM4Q5VZL5 1548 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 DNM2P50570 870 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 TUBB4BP68371 445 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 INF2Q27J81 1249 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 GPR161Q8N6U8 529 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 SNX29Q8TEQ0 813 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 TIGD1Q96MW7 591 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 UIMC1Q96RL1 719 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 KCNH3Q9ULD8 1083 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 ABCC2Q92887 1545 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 LPXNO60711 386 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 CUTAO60888 179 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 ATP5DP30049 168 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 GABPAQ06546 454 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 UBL4BQ8N7F7 174 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 IGSF22Q8N9C0 903 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 SMC1BQ8NDV3 1235 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 DDX17Q92841 729 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 FAM227BQ96M60 508 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 HAUS7Q99871 368 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 NCOA5Q9HCD5 579 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 TLDC2A0PJX2 215 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 HOXB7P09629 217 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 ORAI2Q96SN7 254 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 GINS2Q9Y248 185 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 PRPF6O94906 941 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 TBC1D8BQ0IIM8 1120 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 SPOUT1Q5T280 376 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 CFAP57Q96MR6 1250 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 MYL10Q9BUA6 226 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 AS3MTQ9HBK9 375 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 DNM3Q9UQ16 869 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 CFAP74Q9C0B2 1584 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 GCNT3O95395 438 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 KRT19P08727 400 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 IRX3P78415 501 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 NBPF11Q86T75 865 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 CPXCR1Q8N123 301 aa8.01□□□□□ -1.13
SYNPO2-205ENST00000504178 IBTKQ9P2D0 1353 aaPredicted RBP8□□□□□ -1.13
SYNPO2-205ENST00000504178 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8□□□□□ -1.13
SYNPO2-205ENST00000504178 POLR2DO15514 142 aaKnown RBP8□□□□□ -1.13
SYNPO2-205ENST00000504178 PPIP5K2O43314 1243 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 ZWINTO95229 277 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 ZAP70P43403 619 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 DLGAP5Q15398 846 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 CABP7Q86V35 215 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 NOX5Q96PH1 765 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 PPANQ9NQ55 473 aaKnown RBP8□□□□□ -1.13
SYNPO2-205ENST00000504178 SAMD15Q9P1V8 674 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 PPP2R3AQ06190 1150 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms