RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 KCNH4Q9UQ05 1017 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 TULP2O00295 520 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 PIGRP01833 764 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 FDPSP14324 419 aaKnown RBP3.26□□□□□ -1.89
NEDD4-204ENST00000503468 ERCC3P19447 782 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 RASA2Q15283 850 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 JMYQ8N9B5 988 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 ANKRD24Q8TF21 1146 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 PLCD4Q9BRC7 762 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 CCSER1Q9C0I3 900 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 COQ4Q9Y3A0 265 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 IGKV6-21A0A0C4DH24 114 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 A0A1B0GUL7 405 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 PES1O00541 588 aaKnown RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 MAFGO15525 162 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 ANXA13P27216 316 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 ANTXR2P58335 489 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 XPCQ01831 940 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 PLEKHO1Q53GL0 409 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 AMIGO3Q86WK7 504 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 ANKRD7Q92527 254 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 BORCS6Q96GS4 357 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 PAIP2Q9BPZ3 127 aaKnown RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 GBP3Q9H0R5 595 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 L2HGDHQ9H9P8 463 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 SMC4Q9NTJ3 1288 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 GMEB1Q9Y692 573 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 EMSYQ7Z589 1322 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 IL15P40933 162 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 TWISTNBQ3B726 338 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 SLC9A9Q8IVB4 645 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 CDAN1Q8IWY9 1227 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 WDR18Q9BV38 432 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 KATNBL1Q9H079 304 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 C1orf115Q9H7X2 142 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 CCDC196A0A1B0GTZ2 297 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 PALM3A6NDB9 673 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 EYA2O00167 538 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 EIF3JO75822 258 aaKnown RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 PDE8BO95263 885 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 POU2F2P09086 479 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 HSP90AB4PQ58FF6 505 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 KIF18AQ8NI77 898 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 KIAA1524Q8TCG1 905 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 PPM1EQ8WY54 764 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 SPZ1Q9BXG8 430 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 HELLSQ9NRZ9 838 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 GTF2A1P52655 376 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 UBR7Q8N806 425 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 MIGA1Q8NAN2 632 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 LRRC4BQ9NT99 713 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 PSD3Q9NYI0 1048 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 NRBP1Q9UHY1 535 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 ATF5Q9Y2D1 282 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 CEP83Q9Y592 693 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 WDR33Q9C0J8 1336 aaKnown RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 ZNF292O60281 2723 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 TBX2Q13207 712 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 LDLRAD1Q5T700 205 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 LEKR1Q6ZMV7 388 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 EXOC4Q96A65 974 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 IRX2Q9BZI1 471 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 MED4Q9NPJ6 270 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 ATP1B4Q9UN42 357 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-204ENST00000503468 TBC1D2BQ9UPU7 963 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 MROH5Q6ZUA9 1318 aa3.25□□□□□ -1.89
NEDD4-204ENST00000503468 GRM8O00222 908 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 OPLAHO14841 1288 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 SRGNP10124 158 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 PDCP20941 246 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 TRAPPC10P48553 1259 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 EXOSC9Q06265 439 aaKnown RBP3.24□□□□□ -1.89
NEDD4-204ENST00000503468 ASTE1Q2TB18 679 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-204ENST00000503468 PPP1R18Q6NYC8 613 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 LARP1Q6PKG0 1096 aaKnown RBP3.24□□□□□ -1.89
NEDD4-204ENST00000503468 CFAP61Q8NHU2 1237 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 IGDCC4Q8TDY8 1250 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 STAG1Q8WVM7 1258 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 EMID1Q96A84 441 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-204ENST00000503468 GJD4Q96KN9 370 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-204ENST00000503468 SENP7Q9BQF6 1050 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 RAI14Q9P0K7 980 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 FLT1P17948 1338 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 PTPRJQ12913 1337 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 SHROOM3Q8TF72 1996 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 GOLGA6L9A6NEM1 432 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 RNF113AO15541 343 aaKnown RBP3.24□□□□□ -1.89
NEDD4-204ENST00000503468 LIG1P18858 919 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 CBX1P83916 185 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 GAS2L3Q86XJ1 694 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 RNF168Q8IYW5 571 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-204ENST00000503468 BANK1Q8NDB2 785 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 DNAAF4Q8WXU2 420 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 ERCC4Q92889 916 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-204ENST00000503468 ABLIM1O14639 778 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 PFKFB2O60825 505 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 GYS1P13807 737 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 SLMAPQ14BN4 828 aa3.24□□□□□ -1.89
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