RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 CAPNS2Q96L46 248 aa19.78■□□□□ 0.76
SCLT1-205ENST00000503401 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.78■□□□□ 0.76
SCLT1-205ENST00000503401 EPB41L4AQ9HCS5 686 aaPredicted RBP19.78■□□□□ 0.76
SCLT1-205ENST00000503401 HLA-DOAP06340 250 aa19.77■□□□□ 0.76
SCLT1-205ENST00000503401 MAP3K9P80192 1104 aa19.77■□□□□ 0.76
SCLT1-205ENST00000503401 VGLL4Q14135 290 aa19.77■□□□□ 0.76
SCLT1-205ENST00000503401 VPS53Q5VIR6 699 aa19.77■□□□□ 0.76
SCLT1-205ENST00000503401 TICAM2Q86XR7 235 aa19.77■□□□□ 0.76
SCLT1-205ENST00000503401 ANKRD13AQ8IZ07 590 aa19.77■□□□□ 0.76
SCLT1-205ENST00000503401 HHIPL1Q96JK4 782 aa19.77■□□□□ 0.76
SCLT1-205ENST00000503401 DNAJC18Q9H819 358 aa19.77■□□□□ 0.76
SCLT1-205ENST00000503401 PHF20L1A8MW92 1017 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 USP17L12C9JPN9 530 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 USP17L21D6R901 530 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 GNAT2P19087 354 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 MAP3K10Q02779 954 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 MKRN3Q13064 507 aaKnown RBP19.76■□□□□ 0.75
SCLT1-205ENST00000503401 CRACR2BQ8N4Y2 399 aaPredicted RBP19.76■□□□□ 0.75
SCLT1-205ENST00000503401 IL25Q9H293 177 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 ELP3Q9H9T3 547 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 PATL2C9JE40 543 aaKnown RBP19.76■□□□□ 0.75
SCLT1-205ENST00000503401 HIP1O00291 1037 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 FOXP2O15409 715 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 TBC1D12O60347 775 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 CTR9Q6PD62 1173 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 TTC6Q86TZ1 520 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 RASAL3Q86YV0 1011 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 CNKSR2Q8WXI2 1034 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 SLC10A4Q96EP9 437 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 DDRGK1Q96HY6 314 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 ZNF112Q9UJU3 913 aa19.76■□□□□ 0.75
SCLT1-205ENST00000503401 WDR33Q9C0J8 1336 aaKnown RBP19.75■□□□□ 0.75
SCLT1-205ENST00000503401 ATAD5Q96QE3 1844 aa19.75■□□□□ 0.75
SCLT1-205ENST00000503401 AOC2O75106 756 aa19.75■□□□□ 0.75
SCLT1-205ENST00000503401 CHMLP26374 656 aa19.75■□□□□ 0.75
SCLT1-205ENST00000503401 RRP1BQ14684 758 aaKnown RBP19.75■□□□□ 0.75
SCLT1-205ENST00000503401 BMP2KLQ5H9B9 411 aa19.75■□□□□ 0.75
SCLT1-205ENST00000503401 TRIM34Q9BYJ4 488 aa19.75■□□□□ 0.75
SCLT1-205ENST00000503401 HERC5Q9UII4 1024 aaKnown RBP19.75■□□□□ 0.75
SCLT1-205ENST00000503401 SERPINB13Q9UIV8 391 aa19.75■□□□□ 0.75
SCLT1-205ENST00000503401 CSADQ9Y600 493 aa19.75■□□□□ 0.75
SCLT1-205ENST00000503401 CCDC171Q6TFL3 1326 aa19.74■□□□□ 0.75
SCLT1-205ENST00000503401 FAM155AB1AL88 458 aaPredicted RBP19.74■□□□□ 0.75
SCLT1-205ENST00000503401 TDO2P48775 406 aa19.74■□□□□ 0.75
SCLT1-205ENST00000503401 METTL16Q86W50 562 aaKnown RBP19.74■□□□□ 0.75
SCLT1-205ENST00000503401 FOXP4Q8IVH2 680 aaPredicted RBP19.74■□□□□ 0.75
SCLT1-205ENST00000503401 IFNL3Q8IZI9 196 aa19.74■□□□□ 0.75
SCLT1-205ENST00000503401 DYNLL2Q96FJ2 89 aa19.74■□□□□ 0.75
SCLT1-205ENST00000503401 ZIC5Q96T25 663 aa19.74■□□□□ 0.75
SCLT1-205ENST00000503401 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.74■□□□□ 0.75
SCLT1-205ENST00000503401 SNCAIPQ9Y6H5 919 aa19.74■□□□□ 0.75
SCLT1-205ENST00000503401 MYH8P13535 1937 aa19.74■□□□□ 0.75
SCLT1-205ENST00000503401 LAMB1P07942 1786 aa19.74■□□□□ 0.75
SCLT1-205ENST00000503401 SLC10A3P09131 477 aa19.73■□□□□ 0.75
SCLT1-205ENST00000503401 ECE1P42892 770 aa19.73■□□□□ 0.75
SCLT1-205ENST00000503401 STK11IPQ8N1F8 1099 aa19.73■□□□□ 0.75
SCLT1-205ENST00000503401 DOCK1Q14185 1865 aa19.73■□□□□ 0.75
SCLT1-205ENST00000503401 MINDY4BA8MYZ0 360 aa19.73■□□□□ 0.75
SCLT1-205ENST00000503401 SHROOM1Q2M3G4 852 aaPredicted RBP19.73■□□□□ 0.75
SCLT1-205ENST00000503401 C12orf60Q5U649 245 aa19.73■□□□□ 0.75
SCLT1-205ENST00000503401 GIMAP6Q6P9H5 292 aa19.73■□□□□ 0.75
SCLT1-205ENST00000503401 SLC44A5Q8NCS7 719 aa19.73■□□□□ 0.75
SCLT1-205ENST00000503401 CCDC102AQ96A19 550 aa19.73■□□□□ 0.75
SCLT1-205ENST00000503401 EHD4Q9H223 541 aa19.73■□□□□ 0.75
SCLT1-205ENST00000503401 HSPD1P10809 573 aaKnown RBP19.72■□□□□ 0.75
SCLT1-205ENST00000503401 GJA5P36382 358 aa19.72■□□□□ 0.75
SCLT1-205ENST00000503401 AMOTL1Q8IY63 956 aa19.72■□□□□ 0.75
SCLT1-205ENST00000503401 OPTNQ96CV9 577 aa19.72■□□□□ 0.75
SCLT1-205ENST00000503401 NACAP1Q9BZK3 213 aa19.72■□□□□ 0.75
SCLT1-205ENST00000503401 NAPBQ9H115 298 aa19.72■□□□□ 0.75
SCLT1-205ENST00000503401 ARPP21Q9UBL0 812 aaPredicted RBP19.72■□□□□ 0.75
SCLT1-205ENST00000503401 UNCXA6NJT0 531 aa19.71■□□□□ 0.75
SCLT1-205ENST00000503401 GDF11O95390 407 aa19.71■□□□□ 0.75
SCLT1-205ENST00000503401 GABPAQ06546 454 aa19.71■□□□□ 0.75
SCLT1-205ENST00000503401 OTUD5Q96G74 571 aa19.71■□□□□ 0.75
SCLT1-205ENST00000503401 WNK4Q96J92 1243 aa19.71■□□□□ 0.75
SCLT1-205ENST00000503401 CTNND1O60716 968 aaKnown RBP19.7■□□□□ 0.74
SCLT1-205ENST00000503401 SHMT1P34896 483 aa19.7■□□□□ 0.74
SCLT1-205ENST00000503401 JAG1P78504 1218 aa19.7■□□□□ 0.74
SCLT1-205ENST00000503401 SPRYD7Q5W111 196 aa19.7■□□□□ 0.74
SCLT1-205ENST00000503401 CCDC84Q86UT8 332 aaPredicted RBP19.7■□□□□ 0.74
SCLT1-205ENST00000503401 SCYL3Q8IZE3 742 aa19.7■□□□□ 0.74
SCLT1-205ENST00000503401 CAP2P40123 477 aa19.69■□□□□ 0.74
SCLT1-205ENST00000503401 MFAP1P55081 439 aaKnown RBP19.69■□□□□ 0.74
SCLT1-205ENST00000503401 SBK1Q52WX2 424 aa19.69■□□□□ 0.74
SCLT1-205ENST00000503401 NOL9Q5SY16 702 aaKnown RBP19.69■□□□□ 0.74
SCLT1-205ENST00000503401 NOGQ13253 232 aa19.69■□□□□ 0.74
SCLT1-205ENST00000503401 TATDN1Q6P1N9 297 aa19.69■□□□□ 0.74
SCLT1-205ENST00000503401 PICK1Q9NRD5 415 aa19.69■□□□□ 0.74
SCLT1-205ENST00000503401 PHIPQ8WWQ0 1821 aa19.68■□□□□ 0.74
SCLT1-205ENST00000503401 SPDYE5A6NIY4 337 aa19.68■□□□□ 0.74
SCLT1-205ENST00000503401 FGAP02671 866 aa19.68■□□□□ 0.74
SCLT1-205ENST00000503401 KIF23Q02241 960 aaPredicted RBP19.68■□□□□ 0.74
SCLT1-205ENST00000503401 ERO1BQ86YB8 467 aa19.68■□□□□ 0.74
SCLT1-205ENST00000503401 RUFY2Q8WXA3 655 aa19.68■□□□□ 0.74
SCLT1-205ENST00000503401 GTF3C3Q9Y5Q9 886 aa19.68■□□□□ 0.74
SCLT1-205ENST00000503401 THSD7BQ9C0I4 1608 aa19.68■□□□□ 0.74
SCLT1-205ENST00000503401 PTPRAP18433 802 aa19.67■□□□□ 0.74
SCLT1-205ENST00000503401 CDK8P49336 464 aa19.67■□□□□ 0.74
SCLT1-205ENST00000503401 CERKLQ49MI3 558 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms