RNA–Protein interactions for RNA: ENST00000503204.1

CPNE4-203, Transcript of copine 4, humanhuman

TSL 2

Gene CPNE4, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-203ENST00000503204 CYFIP1Q7L576 1253 aa7.56□□□□□ -1.2
CPNE4-203ENST00000503204 DTX1Q86Y01 620 aa7.56□□□□□ -1.2
CPNE4-203ENST00000503204 PHC3Q8NDX5 983 aa7.56□□□□□ -1.2
CPNE4-203ENST00000503204 ZNF507Q8TCN5 953 aa7.56□□□□□ -1.2
CPNE4-203ENST00000503204 PSMG3-AS1Q96PY0 264 aa7.56□□□□□ -1.2
CPNE4-203ENST00000503204 PRAMEF27A3QJZ7 478 aa7.55□□□□□ -1.2
CPNE4-203ENST00000503204 ZNF16P17020 682 aaPredicted RBP7.55□□□□□ -1.2
CPNE4-203ENST00000503204 HOXA10P31260 410 aaPredicted RBP7.55□□□□□ -1.2
CPNE4-203ENST00000503204 RBM25P49756 843 aaKnown RBP7.55□□□□□ -1.2
CPNE4-203ENST00000503204 PWP1Q13610 501 aa7.55□□□□□ -1.2
CPNE4-203ENST00000503204 SEPT6Q14141 434 aa7.55□□□□□ -1.2
CPNE4-203ENST00000503204 MRPL58Q14197 206 aaKnown RBP7.55□□□□□ -1.2
CPNE4-203ENST00000503204 MSMPQ1L6U9 139 aa7.55□□□□□ -1.2
CPNE4-203ENST00000503204 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.55□□□□□ -1.2
CPNE4-203ENST00000503204 CCDC84Q86UT8 332 aaPredicted RBP7.55□□□□□ -1.2
CPNE4-203ENST00000503204 ZNF428Q96B54 188 aa7.55□□□□□ -1.2
CPNE4-203ENST00000503204 TACC3Q9Y6A5 838 aa7.55□□□□□ -1.2
CPNE4-203ENST00000503204 TSNAXIP1Q2TAA8 658 aa7.54□□□□□ -1.2
CPNE4-203ENST00000503204 RELL1Q8IUW5 271 aa7.54□□□□□ -1.2
CPNE4-203ENST00000503204 RSRP1Q9BUV0 290 aa7.54□□□□□ -1.2
CPNE4-203ENST00000503204 DUSP23Q9BVJ7 150 aa7.54□□□□□ -1.2
CPNE4-203ENST00000503204 WNT10AQ9GZT5 417 aa7.54□□□□□ -1.2
CPNE4-203ENST00000503204 TLR6Q9Y2C9 796 aa7.54□□□□□ -1.2
CPNE4-203ENST00000503204 LMNB2Q03252 620 aa7.53□□□□□ -1.2
CPNE4-203ENST00000503204 LRRC4CQ9HCJ2 640 aa7.53□□□□□ -1.2
CPNE4-203ENST00000503204 GFRA2O00451 464 aa7.52□□□□□ -1.21
CPNE4-203ENST00000503204 ETF1P62495 437 aaKnown RBP7.52□□□□□ -1.21
CPNE4-203ENST00000503204 RPL6Q02878 288 aaKnown RBP7.52□□□□□ -1.21
CPNE4-203ENST00000503204 TOP6BLQ8N6T0 577 aa7.52□□□□□ -1.21
CPNE4-203ENST00000503204 RHOVQ96L33 236 aa7.52□□□□□ -1.21
CPNE4-203ENST00000503204 TMEM74Q96NL1 305 aa7.52□□□□□ -1.21
CPNE4-203ENST00000503204 LRIG2O94898 1065 aa7.51□□□□□ -1.21
CPNE4-203ENST00000503204 PRNPP04156 253 aa7.51□□□□□ -1.21
CPNE4-203ENST00000503204 GBP2P32456 591 aaPredicted RBP7.51□□□□□ -1.21
CPNE4-203ENST00000503204 CAP2P40123 477 aa7.51□□□□□ -1.21
CPNE4-203ENST00000503204 CDK8P49336 464 aa7.51□□□□□ -1.21
CPNE4-203ENST00000503204 CAMK2GQ13555 558 aaPredicted RBP7.51□□□□□ -1.21
CPNE4-203ENST00000503204 ARMCX6Q7L4S7 300 aa7.51□□□□□ -1.21
CPNE4-203ENST00000503204 UBE3DQ7Z6J8 389 aa7.51□□□□□ -1.21
CPNE4-203ENST00000503204 JARID2Q92833 1246 aaPredicted RBP7.51□□□□□ -1.21
CPNE4-203ENST00000503204 PRDM10Q9NQV6 1147 aa7.51□□□□□ -1.21
CPNE4-203ENST00000503204 BSDC1Q9NW68 430 aaPredicted RBP7.51□□□□□ -1.21
CPNE4-203ENST00000503204 RBM47A0AV96 593 aaKnown RBP7.5□□□□□ -1.21
CPNE4-203ENST00000503204 E9PSI1 815 aa7.5□□□□□ -1.21
CPNE4-203ENST00000503204 LEFTY1O75610 366 aa7.5□□□□□ -1.21
CPNE4-203ENST00000503204 WNT11O96014 354 aa7.5□□□□□ -1.21
CPNE4-203ENST00000503204 PF4P02776 101 aa7.5□□□□□ -1.21
CPNE4-203ENST00000503204 GRK4P32298 578 aa7.5□□□□□ -1.21
CPNE4-203ENST00000503204 ERMP1Q7Z2K6 904 aa7.5□□□□□ -1.21
CPNE4-203ENST00000503204 HID1Q8IV36 788 aa7.5□□□□□ -1.21
CPNE4-203ENST00000503204 MKNK2Q9HBH9 465 aa7.5□□□□□ -1.21
CPNE4-203ENST00000503204 ZC3H7BQ9UGR2 993 aaKnown RBP7.5□□□□□ -1.21
CPNE4-203ENST00000503204 F6X3S4 739 aa7.49□□□□□ -1.21
CPNE4-203ENST00000503204 BPNT1O95861 308 aa7.49□□□□□ -1.21
CPNE4-203ENST00000503204 PDE4BQ07343 736 aa7.49□□□□□ -1.21
CPNE4-203ENST00000503204 VSIG10LQ86VR7 867 aa7.49□□□□□ -1.21
CPNE4-203ENST00000503204 GATAD2BQ8WXI9 593 aa7.49□□□□□ -1.21
CPNE4-203ENST00000503204 FOXQ1Q9C009 403 aa7.49□□□□□ -1.21
CPNE4-203ENST00000503204 FBRSQ9HAH7 460 aa7.49□□□□□ -1.21
CPNE4-203ENST00000503204 GTF2IRD1Q9UHL9 959 aa7.49□□□□□ -1.21
CPNE4-203ENST00000503204 ANGEL1Q9UNK9 670 aaKnown RBP7.49□□□□□ -1.21
CPNE4-203ENST00000503204 CILPO75339 1184 aa7.48□□□□□ -1.21
CPNE4-203ENST00000503204 SLBPQ14493 270 aaKnown RBP eCLIP7.48□□□□□ -1.21
CPNE4-203ENST00000503204 BNC2Q6ZN30 1099 aaPredicted RBP7.48□□□□□ -1.21
CPNE4-203ENST00000503204 ARHGAP27Q6ZUM4 889 aa7.48□□□□□ -1.21
CPNE4-203ENST00000503204 HS2ST1Q7LGA3 356 aa7.48□□□□□ -1.21
CPNE4-203ENST00000503204 MFSD2AQ8NA29 543 aa7.48□□□□□ -1.21
CPNE4-203ENST00000503204 KBTBD4Q9NVX7 518 aa7.48□□□□□ -1.21
CPNE4-203ENST00000503204 CCDC39Q9UFE4 941 aa7.48□□□□□ -1.21
CPNE4-203ENST00000503204 FAM221AA4D161 298 aa7.47□□□□□ -1.21
CPNE4-203ENST00000503204 IGF2BP3O00425 579 aaKnown RBP eCLIP7.47□□□□□ -1.21
CPNE4-203ENST00000503204 PGRP06401 933 aa7.47□□□□□ -1.21
CPNE4-203ENST00000503204 GP2P55259 537 aaKnown RBP7.47□□□□□ -1.21
CPNE4-203ENST00000503204 NKG7Q16617 165 aa7.47□□□□□ -1.21
CPNE4-203ENST00000503204 SNAP47Q5SQN1 464 aa7.47□□□□□ -1.21
CPNE4-203ENST00000503204 NETO1Q8TDF5 533 aa7.47□□□□□ -1.21
CPNE4-203ENST00000503204 GGT7Q9UJ14 662 aa7.47□□□□□ -1.21
CPNE4-203ENST00000503204 ADAM30Q9UKF2 790 aa7.47□□□□□ -1.21
CPNE4-203ENST00000503204 MINDY4BA8MYZ0 360 aa7.46□□□□□ -1.22
CPNE4-203ENST00000503204 ADAMTS4O75173 837 aa7.46□□□□□ -1.22
CPNE4-203ENST00000503204 F13A1P00488 732 aa7.46□□□□□ -1.22
CPNE4-203ENST00000503204 CST3P01034 146 aaPredicted RBP7.46□□□□□ -1.22
CPNE4-203ENST00000503204 HMGB1P09429 215 aaKnown RBP7.46□□□□□ -1.22
CPNE4-203ENST00000503204 OXCT1P55809 520 aa7.46□□□□□ -1.22
CPNE4-203ENST00000503204 FAM214BQ7L5A3 538 aa7.46□□□□□ -1.22
CPNE4-203ENST00000503204 MRPL41Q8IXM3 137 aaKnown RBP7.46□□□□□ -1.22
CPNE4-203ENST00000503204 STK11IPQ8N1F8 1099 aa7.46□□□□□ -1.22
CPNE4-203ENST00000503204 FAM181AQ8N9Y4 354 aa7.46□□□□□ -1.22
CPNE4-203ENST00000503204 GOLM1Q8NBJ4 401 aa7.46□□□□□ -1.22
CPNE4-203ENST00000503204 TMEM87AQ8NBN3 555 aa7.46□□□□□ -1.22
CPNE4-203ENST00000503204 MISP3Q96FF7 219 aa7.46□□□□□ -1.22
CPNE4-203ENST00000503204 FBXL18Q96ME1 805 aa7.46□□□□□ -1.22
CPNE4-203ENST00000503204 CEACAM5P06731 702 aa7.45□□□□□ -1.22
CPNE4-203ENST00000503204 FAM160A1Q05DH4 1040 aa7.45□□□□□ -1.22
CPNE4-203ENST00000503204 MPP2Q14168 576 aa7.45□□□□□ -1.22
CPNE4-203ENST00000503204 IFI16Q16666 785 aaKnown RBP7.45□□□□□ -1.22
CPNE4-203ENST00000503204 SLC6A19Q695T7 634 aa7.45□□□□□ -1.22
CPNE4-203ENST00000503204 HEXIM2Q96MH2 286 aaKnown RBP7.45□□□□□ -1.22
CPNE4-203ENST00000503204 MIPEPQ99797 713 aa7.45□□□□□ -1.22
CPNE4-203ENST00000503204 COPRSQ9NQ92 184 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms