RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 HLA-DOAP06340 250 aa30.15■■■□□ 2.42
LSM6-202ENST00000502781 NMIQ13287 307 aaPredicted RBP30.15■■■□□ 2.42
LSM6-202ENST00000502781 GIMAP6Q6P9H5 292 aa30.15■■■□□ 2.42
LSM6-202ENST00000502781 TTC6Q86TZ1 520 aa30.15■■■□□ 2.42
LSM6-202ENST00000502781 JMYQ8N9B5 988 aa30.15■■■□□ 2.42
LSM6-202ENST00000502781 FAM196BA6NMK8 535 aa30.14■■■□□ 2.41
LSM6-202ENST00000502781 INPP5BP32019 993 aa30.14■■■□□ 2.41
LSM6-202ENST00000502781 PLCD1P51178 756 aa30.14■■■□□ 2.41
LSM6-202ENST00000502781 NOL9Q5SY16 702 aaKnown RBP30.14■■■□□ 2.41
LSM6-202ENST00000502781 ZKSCAN4Q969J2 545 aaPredicted RBP30.14■■■□□ 2.41
LSM6-202ENST00000502781 SLC10A4Q96EP9 437 aa30.14■■■□□ 2.41
LSM6-202ENST00000502781 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.14■■■□□ 2.41
LSM6-202ENST00000502781 MYH1P12882 1939 aa30.13■■■□□ 2.41
LSM6-202ENST00000502781 HIP1O00291 1037 aa30.13■■■□□ 2.41
LSM6-202ENST00000502781 NOGQ13253 232 aa30.13■■■□□ 2.41
LSM6-202ENST00000502781 MCMDC2Q4G0Z9 681 aa30.13■■■□□ 2.41
LSM6-202ENST00000502781 EPB41L4AQ9HCS5 686 aaPredicted RBP30.13■■■□□ 2.41
LSM6-202ENST00000502781 CSADQ9Y600 493 aa30.13■■■□□ 2.41
LSM6-202ENST00000502781 SNCAIPQ9Y6H5 919 aa30.13■■■□□ 2.41
LSM6-202ENST00000502781 NAV1Q8NEY1 1877 aa30.12■■■□□ 2.41
LSM6-202ENST00000502781 THSD7BQ9C0I4 1608 aa30.12■■■□□ 2.41
LSM6-202ENST00000502781 PATL2C9JE40 543 aaKnown RBP30.12■■■□□ 2.41
LSM6-202ENST00000502781 MAP2K2P36507 400 aa30.12■■■□□ 2.41
LSM6-202ENST00000502781 FOXP2O15409 715 aa30.11■■■□□ 2.41
LSM6-202ENST00000502781 POLR3DP05423 398 aaPredicted RBP30.11■■■□□ 2.41
LSM6-202ENST00000502781 GABPAQ06546 454 aa30.11■■■□□ 2.41
LSM6-202ENST00000502781 GRM1Q13255 1194 aa30.11■■■□□ 2.41
LSM6-202ENST00000502781 SLC4A8Q2Y0W8 1093 aa30.11■■■□□ 2.41
LSM6-202ENST00000502781 CCDC129Q6ZRS4 1044 aa30.11■■■□□ 2.41
LSM6-202ENST00000502781 SERPINB13Q9UIV8 391 aa30.11■■■□□ 2.41
LSM6-202ENST00000502781 USP17L12C9JPN9 530 aa30.1■■■□□ 2.41
LSM6-202ENST00000502781 USP17L21D6R901 530 aa30.1■■■□□ 2.41
LSM6-202ENST00000502781 CTNND1O60716 968 aaKnown RBP30.1■■■□□ 2.41
LSM6-202ENST00000502781 AOC2O75106 756 aa30.1■■■□□ 2.41
LSM6-202ENST00000502781 SPRYD7Q5W111 196 aa30.1■■■□□ 2.41
LSM6-202ENST00000502781 DDRGK1Q96HY6 314 aa30.1■■■□□ 2.41
LSM6-202ENST00000502781 ZIC5Q96T25 663 aa30.1■■■□□ 2.41
LSM6-202ENST00000502781 ELP3Q9H9T3 547 aa30.1■■■□□ 2.41
LSM6-202ENST00000502781 ZBTB48P10074 688 aaPredicted RBP30.09■■■□□ 2.41
LSM6-202ENST00000502781 EVX2Q03828 476 aa30.09■■■□□ 2.41
LSM6-202ENST00000502781 RRP1BQ14684 758 aaKnown RBP30.09■■■□□ 2.41
LSM6-202ENST00000502781 SBK1Q52WX2 424 aa30.09■■■□□ 2.41
LSM6-202ENST00000502781 BMP2KLQ5H9B9 411 aa30.09■■■□□ 2.41
LSM6-202ENST00000502781 C12orf60Q5U649 245 aa30.09■■■□□ 2.41
LSM6-202ENST00000502781 CTR9Q6PD62 1173 aa30.09■■■□□ 2.41
LSM6-202ENST00000502781 WNK4Q96J92 1243 aa30.09■■■□□ 2.41
LSM6-202ENST00000502781 DIAPH3Q9NSV4 1193 aa30.09■■■□□ 2.41
LSM6-202ENST00000502781 TAOK2Q9UL54 1235 aa30.09■■■□□ 2.41
LSM6-202ENST00000502781 SPDYE5A6NIY4 337 aa30.08■■■□□ 2.41
LSM6-202ENST00000502781 CYP2D6P10635 497 aa30.08■■■□□ 2.41
LSM6-202ENST00000502781 GJA5P36382 358 aa30.08■■■□□ 2.41
LSM6-202ENST00000502781 ZNF589Q86UQ0 364 aaPredicted RBP30.08■■■□□ 2.41
LSM6-202ENST00000502781 SCYL3Q8IZE3 742 aa30.08■■■□□ 2.41
LSM6-202ENST00000502781 IFNL3Q8IZI9 196 aa30.08■■■□□ 2.41
LSM6-202ENST00000502781 CRACR2BQ8N4Y2 399 aaPredicted RBP30.08■■■□□ 2.41
LSM6-202ENST00000502781 ARPP21Q9UBL0 812 aaPredicted RBP30.08■■■□□ 2.41
LSM6-202ENST00000502781 TATDN1Q6P1N9 297 aa30.07■■■□□ 2.4
LSM6-202ENST00000502781 CWC27Q6UX04 472 aaKnown RBP30.07■■■□□ 2.4
LSM6-202ENST00000502781 ERO1BQ86YB8 467 aa30.07■■■□□ 2.4
LSM6-202ENST00000502781 CAP2P40123 477 aa30.06■■■□□ 2.4
LSM6-202ENST00000502781 VPS53Q5VIR6 699 aa30.06■■■□□ 2.4
LSM6-202ENST00000502781 CNKSR2Q8WXI2 1034 aa30.06■■■□□ 2.4
LSM6-202ENST00000502781 OPTNQ96CV9 577 aa30.06■■■□□ 2.4
LSM6-202ENST00000502781 CCDC171Q6TFL3 1326 aa30.06■■■□□ 2.4
LSM6-202ENST00000502781 CHMLP26374 656 aa30.05■■■□□ 2.4
LSM6-202ENST00000502781 KIF23Q02241 960 aaPredicted RBP30.05■■■□□ 2.4
LSM6-202ENST00000502781 NACAP1Q9BZK3 213 aa30.05■■■□□ 2.4
LSM6-202ENST00000502781 BAZ2AQ9UIF9 1905 aaKnown RBP30.05■■■□□ 2.4
LSM6-202ENST00000502781 CYP2D7A0A087X1C5 515 aa30.04■■■□□ 2.4
LSM6-202ENST00000502781 SMIM22K7EJ46 135 aa30.04■■■□□ 2.4
LSM6-202ENST00000502781 APPP05067 770 aa30.04■■■□□ 2.4
LSM6-202ENST00000502781 SHMT1P34896 483 aa30.04■■■□□ 2.4
LSM6-202ENST00000502781 AMOTL1Q8IY63 956 aa30.04■■■□□ 2.4
LSM6-202ENST00000502781 TRIM34Q9BYJ4 488 aa30.04■■■□□ 2.4
LSM6-202ENST00000502781 PPATQ06203 517 aa30.03■■■□□ 2.4
LSM6-202ENST00000502781 MFAP1P55081 439 aaKnown RBP30.03■■■□□ 2.4
LSM6-202ENST00000502781 ALX1Q15699 326 aa30.03■■■□□ 2.4
LSM6-202ENST00000502781 IL25Q9H293 177 aa30.03■■■□□ 2.4
LSM6-202ENST00000502781 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.03■■■□□ 2.4
LSM6-202ENST00000502781 HSPD1P10809 573 aaKnown RBP30.02■■■□□ 2.4
LSM6-202ENST00000502781 PTPRAP18433 802 aa30.02■■■□□ 2.4
LSM6-202ENST00000502781 TDO2P48775 406 aa30.02■■■□□ 2.4
LSM6-202ENST00000502781 PPIL2Q13356 520 aa30.02■■■□□ 2.4
LSM6-202ENST00000502781 OTUD5Q96G74 571 aa30.02■■■□□ 2.4
LSM6-202ENST00000502781 GINM1Q9NU53 330 aa30.02■■■□□ 2.4
LSM6-202ENST00000502781 SWAP70Q9UH65 585 aa30.02■■■□□ 2.4
LSM6-202ENST00000502781 ROBO3Q96MS0 1386 aa30.01■■■□□ 2.39
LSM6-202ENST00000502781 RAD50Q92878 1312 aa30.01■■■□□ 2.39
LSM6-202ENST00000502781 JAG1P78504 1218 aa30.01■■■□□ 2.39
LSM6-202ENST00000502781 MKRN3Q13064 507 aaKnown RBP30.01■■■□□ 2.39
LSM6-202ENST00000502781 C16orf86Q6ZW13 317 aa30.01■■■□□ 2.39
LSM6-202ENST00000502781 REM2Q8IYK8 340 aaPredicted RBP30.01■■■□□ 2.39
LSM6-202ENST00000502781 DYNLL2Q96FJ2 89 aa30.01■■■□□ 2.39
LSM6-202ENST00000502781 NAPBQ9H115 298 aa30.01■■■□□ 2.39
LSM6-202ENST00000502781 PICK1Q9NRD5 415 aa30.01■■■□□ 2.39
LSM6-202ENST00000502781 ZMYM6O95789 1325 aa30■■■□□ 2.39
LSM6-202ENST00000502781 IRF6O14896 467 aa30■■■□□ 2.39
LSM6-202ENST00000502781 SLC44A5Q8NCS7 719 aa30■■■□□ 2.39
LSM6-202ENST00000502781 MS4A4AQ96JQ5 239 aa30■■■□□ 2.39
LSM6-202ENST00000502781 DOCK1Q14185 1865 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms