RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 BTBD18B2RXH4 712 aa19.09■□□□□ 0.65
VCAN-204ENST00000502527 RIOK3O14730 519 aaKnown RBP19.09■□□□□ 0.65
VCAN-204ENST00000502527 RGL2O15211 777 aa19.09■□□□□ 0.65
VCAN-204ENST00000502527 STK11IPQ8N1F8 1099 aa19.09■□□□□ 0.65
VCAN-204ENST00000502527 SDR42E1Q8WUS8 393 aa19.09■□□□□ 0.65
VCAN-204ENST00000502527 C16orf45Q96MC5 204 aaPredicted RBP19.09■□□□□ 0.65
VCAN-204ENST00000502527 CLIC6Q96NY7 704 aa19.09■□□□□ 0.65
VCAN-204ENST00000502527 OSBPL5Q9H0X9 879 aaPredicted RBP19.09■□□□□ 0.65
VCAN-204ENST00000502527 NUTM2BA6NNL0 878 aaPredicted RBP19.09■□□□□ 0.65
VCAN-204ENST00000502527 NUTM2EB1AL46 878 aaPredicted RBP19.09■□□□□ 0.65
VCAN-204ENST00000502527 TNNT1P13805 278 aa19.09■□□□□ 0.65
VCAN-204ENST00000502527 DHX8Q14562 1220 aaKnown RBP19.09■□□□□ 0.65
VCAN-204ENST00000502527 ARID5BQ14865 1188 aa19.09■□□□□ 0.65
VCAN-204ENST00000502527 RILPL1Q5EBL4 403 aa19.09■□□□□ 0.65
VCAN-204ENST00000502527 C3orf67Q6ZVT6 689 aa19.09■□□□□ 0.65
VCAN-204ENST00000502527 NUTM2AQ8IVF1 878 aaPredicted RBP19.09■□□□□ 0.65
VCAN-204ENST00000502527 NUP133Q8WUM0 1156 aa19.09■□□□□ 0.65
VCAN-204ENST00000502527 RIOK1Q9BRS2 568 aaKnown RBP19.09■□□□□ 0.65
VCAN-204ENST00000502527 KCNH3Q9ULD8 1083 aa19.09■□□□□ 0.65
VCAN-204ENST00000502527 SMC2O95347 1197 aa19.08■□□□□ 0.64
VCAN-204ENST00000502527 NCAPHQ15003 741 aa19.08■□□□□ 0.64
VCAN-204ENST00000502527 ELOA2Q8IYF1 753 aaPredicted RBP19.08■□□□□ 0.64
VCAN-204ENST00000502527 LINC00116Q8NCU8 138 aa19.08■□□□□ 0.64
VCAN-204ENST00000502527 MINPP1Q9UNW1 487 aa19.08■□□□□ 0.64
VCAN-204ENST00000502527 KCNJ14Q9UNX9 436 aa19.08■□□□□ 0.64
VCAN-204ENST00000502527 ECM29Q5VYK3 1845 aa19.08■□□□□ 0.64
VCAN-204ENST00000502527 GTF2E1P29083 439 aaPredicted RBP19.07■□□□□ 0.64
VCAN-204ENST00000502527 SEC23AQ15436 765 aa19.07■□□□□ 0.64
VCAN-204ENST00000502527 SLC10A5Q5PT55 438 aa19.07■□□□□ 0.64
VCAN-204ENST00000502527 BRIP1Q9BX63 1249 aa19.07■□□□□ 0.64
VCAN-204ENST00000502527 XPO4Q9C0E2 1151 aaKnown RBP19.07■□□□□ 0.64
VCAN-204ENST00000502527 IFNKQ9P0W0 207 aa19.07■□□□□ 0.64
VCAN-204ENST00000502527 HOOK1Q9UJC3 728 aaKnown RBP19.07■□□□□ 0.64
VCAN-204ENST00000502527 TNKSO95271 1327 aa19.07■□□□□ 0.64
VCAN-204ENST00000502527 TOB1P50616 345 aaPredicted RBP19.07■□□□□ 0.64
VCAN-204ENST00000502527 CCZ1BP86790 482 aa19.07■□□□□ 0.64
VCAN-204ENST00000502527 CCZ1P86791 482 aaPredicted RBP19.07■□□□□ 0.64
VCAN-204ENST00000502527 KRBA2Q6ZNG9 492 aa19.07■□□□□ 0.64
VCAN-204ENST00000502527 CCDC82Q8N4S0 544 aa19.07■□□□□ 0.64
VCAN-204ENST00000502527 CNNM3Q8NE01 707 aa19.07■□□□□ 0.64
VCAN-204ENST00000502527 PAXBP1Q9Y5B6 917 aa19.07■□□□□ 0.64
VCAN-204ENST00000502527 SEMA3EO15041 775 aa19.06■□□□□ 0.64
VCAN-204ENST00000502527 PCP11498 1178 aaKnown RBP19.06■□□□□ 0.64
VCAN-204ENST00000502527 PNOCQ13519 176 aa19.06■□□□□ 0.64
VCAN-204ENST00000502527 FAM84BQ96KN1 310 aaPredicted RBP19.06■□□□□ 0.64
VCAN-204ENST00000502527 RNF26Q9BY78 433 aaPredicted RBP19.06■□□□□ 0.64
VCAN-204ENST00000502527 COL4A1P02462 1669 aa19.06■□□□□ 0.64
VCAN-204ENST00000502527 COL1A1P02452 1464 aaPredicted RBP19.06■□□□□ 0.64
VCAN-204ENST00000502527 AKAP17AQ02040 695 aaKnown RBP19.05■□□□□ 0.64
VCAN-204ENST00000502527 LONRF3Q496Y0 759 aa19.05■□□□□ 0.64
VCAN-204ENST00000502527 CCDC150Q8NCX0 1101 aa19.05■□□□□ 0.64
VCAN-204ENST00000502527 TSC1Q92574 1164 aa19.05■□□□□ 0.64
VCAN-204ENST00000502527 ZSCAN10Q96SZ4 725 aaPredicted RBP19.05■□□□□ 0.64
VCAN-204ENST00000502527 CEP131Q9UPN4 1083 aa19.05■□□□□ 0.64
VCAN-204ENST00000502527 CNTNAP4Q9C0A0 1308 aa19.05■□□□□ 0.64
VCAN-204ENST00000502527 XBP1P17861 261 aa19.05■□□□□ 0.64
VCAN-204ENST00000502527 PTPREP23469 700 aa19.05■□□□□ 0.64
VCAN-204ENST00000502527 ISM2Q6H9L7 571 aa19.05■□□□□ 0.64
VCAN-204ENST00000502527 OLFM4Q6UX06 510 aa19.05■□□□□ 0.64
VCAN-204ENST00000502527 METTL16Q86W50 562 aaKnown RBP19.05■□□□□ 0.64
VCAN-204ENST00000502527 CMTR1Q8N1G2 835 aaKnown RBP19.05■□□□□ 0.64
VCAN-204ENST00000502527 COL5A3P25940 1745 aaPredicted RBP19.05■□□□□ 0.64
VCAN-204ENST00000502527 WTIPA6NIX2 430 aaPredicted RBP19.04■□□□□ 0.64
VCAN-204ENST00000502527 MYL5Q02045 173 aa19.04■□□□□ 0.64
VCAN-204ENST00000502527 BICDL1Q6ZP65 573 aa19.04■□□□□ 0.64
VCAN-204ENST00000502527 FBXO33Q7Z6M2 555 aa19.04■□□□□ 0.64
VCAN-204ENST00000502527 ZNF579Q8NAF0 562 aaKnown RBP19.04■□□□□ 0.64
VCAN-204ENST00000502527 NYXQ9GZU5 481 aa19.04■□□□□ 0.64
VCAN-204ENST00000502527 KCND1Q9NSA2 647 aa19.04■□□□□ 0.64
VCAN-204ENST00000502527 FBXO2Q9UK22 296 aaPredicted RBP19.04■□□□□ 0.64
VCAN-204ENST00000502527 ZNF831Q5JPB2 1677 aa19.04■□□□□ 0.64
VCAN-204ENST00000502527 CTIFO43310 598 aaKnown RBP19.04■□□□□ 0.64
VCAN-204ENST00000502527 MYO1BO43795 1136 aa19.04■□□□□ 0.64
VCAN-204ENST00000502527 DYNLL1P63167 89 aaKnown RBP19.04■□□□□ 0.64
VCAN-204ENST00000502527 FANCCQ00597 558 aa19.04■□□□□ 0.64
VCAN-204ENST00000502527 CATIPQ7Z7H3 387 aa19.04■□□□□ 0.64
VCAN-204ENST00000502527 ENAHQ8N8S7 591 aaPredicted RBP19.04■□□□□ 0.64
VCAN-204ENST00000502527 CELF1Q92879 486 aaKnown RBP19.04■□□□□ 0.64
VCAN-204ENST00000502527 NOL10Q9BSC4 688 aaKnown RBP19.04■□□□□ 0.64
VCAN-204ENST00000502527 BCL2L12Q9HB09 334 aa19.04■□□□□ 0.64
VCAN-204ENST00000502527 LMOD1P29536 600 aaPredicted RBP19.03■□□□□ 0.64
VCAN-204ENST00000502527 CEP135Q66GS9 1140 aa19.03■□□□□ 0.64
VCAN-204ENST00000502527 TBC1D9BQ66K14 1250 aa19.03■□□□□ 0.64
VCAN-204ENST00000502527 TMC6Q7Z403 805 aa19.03■□□□□ 0.64
VCAN-204ENST00000502527 IQCA1Q86XH1 822 aa19.03■□□□□ 0.64
VCAN-204ENST00000502527 ZNF710Q8N1W2 664 aa19.03■□□□□ 0.64
VCAN-204ENST00000502527 UBE2Q2Q8WVN8 375 aa19.03■□□□□ 0.64
VCAN-204ENST00000502527 PDS5AQ29RF7 1337 aaKnown RBP19.03■□□□□ 0.64
VCAN-204ENST00000502527 CBFA2T2O43439 604 aa19.02■□□□□ 0.64
VCAN-204ENST00000502527 FGRP09769 529 aa19.02■□□□□ 0.64
VCAN-204ENST00000502527 CALM1P0DP23 149 aa19.02■□□□□ 0.64
VCAN-204ENST00000502527 CALM2P0DP24 149 aa19.02■□□□□ 0.64
VCAN-204ENST00000502527 CALM3P0DP25 149 aa19.02■□□□□ 0.64
VCAN-204ENST00000502527 NR5A1Q13285 461 aa19.02■□□□□ 0.64
VCAN-204ENST00000502527 IFIT1BQ5T764 474 aaKnown RBP19.02■□□□□ 0.64
VCAN-204ENST00000502527 RBM28Q9NW13 759 aaKnown RBP19.02■□□□□ 0.64
VCAN-204ENST00000502527 PCDHA5Q9Y5H7 936 aa19.02■□□□□ 0.64
VCAN-204ENST00000502527 NRDCO43847 1150 aa19.02■□□□□ 0.63
VCAN-204ENST00000502527 RPS8P62241 208 aaKnown RBP19.02■□□□□ 0.63
VCAN-204ENST00000502527 MDM2Q00987 491 aaPredicted RBP19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms