RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 MCM9Q9NXL9 1143 aa20.15■□□□□ 0.82
PRKCB-210ENST00000498739 HERC5Q9UII4 1024 aaKnown RBP20.15■□□□□ 0.82
PRKCB-210ENST00000498739 SNCAIPQ9Y6H5 919 aa20.15■□□□□ 0.82
PRKCB-210ENST00000498739 NAV1Q8NEY1 1877 aa20.15■□□□□ 0.82
PRKCB-210ENST00000498739 CEP350Q5VT06 3117 aa20.14■□□□□ 0.82
PRKCB-210ENST00000498739 POLR3DP05423 398 aaPredicted RBP20.14■□□□□ 0.81
PRKCB-210ENST00000498739 ERICH6BQ5W0A0 696 aa20.14■□□□□ 0.81
PRKCB-210ENST00000498739 TTC6Q86TZ1 520 aa20.14■□□□□ 0.81
PRKCB-210ENST00000498739 OPTNQ96CV9 577 aa20.14■□□□□ 0.81
PRKCB-210ENST00000498739 DDRGK1Q96HY6 314 aa20.14■□□□□ 0.81
PRKCB-210ENST00000498739 WNK4Q96J92 1243 aa20.14■□□□□ 0.81
PRKCB-210ENST00000498739 ATP8A2Q9NTI2 1148 aa20.14■□□□□ 0.81
PRKCB-210ENST00000498739 DDX60LQ5H9U9 1706 aaKnown RBP20.13■□□□□ 0.81
PRKCB-210ENST00000498739 PHF20L1A8MW92 1017 aa20.13■□□□□ 0.81
PRKCB-210ENST00000498739 GSPT1P15170 499 aaKnown RBP20.13■□□□□ 0.81
PRKCB-210ENST00000498739 FOXP4Q8IVH2 680 aaPredicted RBP20.13■□□□□ 0.81
PRKCB-210ENST00000498739 CNKSR2Q8WXI2 1034 aa20.13■□□□□ 0.81
PRKCB-210ENST00000498739 SIPA1L1O43166 1804 aa20.13■□□□□ 0.81
PRKCB-210ENST00000498739 MYH1P12882 1939 aa20.12■□□□□ 0.81
PRKCB-210ENST00000498739 ZBTB48P10074 688 aaPredicted RBP20.12■□□□□ 0.81
PRKCB-210ENST00000498739 GJA5P36382 358 aa20.12■□□□□ 0.81
PRKCB-210ENST00000498739 MAP2K1Q02750 393 aaPredicted RBP20.12■□□□□ 0.81
PRKCB-210ENST00000498739 NOL9Q5SY16 702 aaKnown RBP20.12■□□□□ 0.81
PRKCB-210ENST00000498739 OTUD5Q96G74 571 aa20.12■□□□□ 0.81
PRKCB-210ENST00000498739 SPDYE5A6NIY4 337 aa20.11■□□□□ 0.81
PRKCB-210ENST00000498739 GNAT2P19087 354 aa20.11■□□□□ 0.81
PRKCB-210ENST00000498739 SDSP20132 328 aa20.11■□□□□ 0.81
PRKCB-210ENST00000498739 PLCD1P51178 756 aa20.11■□□□□ 0.81
PRKCB-210ENST00000498739 CCDC129Q6ZRS4 1044 aa20.11■□□□□ 0.81
PRKCB-210ENST00000498739 TICAM2Q86XR7 235 aa20.11■□□□□ 0.81
PRKCB-210ENST00000498739 ERO1BQ86YB8 467 aa20.11■□□□□ 0.81
PRKCB-210ENST00000498739 AMOTL1Q8IY63 956 aa20.11■□□□□ 0.81
PRKCB-210ENST00000498739 SCYL3Q8IZE3 742 aa20.11■□□□□ 0.81
PRKCB-210ENST00000498739 FAM227BQ96M60 508 aa20.11■□□□□ 0.81
PRKCB-210ENST00000498739 EHD4Q9H223 541 aa20.11■□□□□ 0.81
PRKCB-210ENST00000498739 DNAJC18Q9H819 358 aa20.11■□□□□ 0.81
PRKCB-210ENST00000498739 HELLSQ9NRZ9 838 aa20.11■□□□□ 0.81
PRKCB-210ENST00000498739 PPP4R2Q9NY27 417 aa20.11■□□□□ 0.81
PRKCB-210ENST00000498739 A0A0D9SFI3 127 aa20.1■□□□□ 0.81
PRKCB-210ENST00000498739 GSG1L2A8MUP6 293 aa20.1■□□□□ 0.81
PRKCB-210ENST00000498739 CTNND1O60716 968 aaKnown RBP20.1■□□□□ 0.81
PRKCB-210ENST00000498739 APPP05067 770 aa20.1■□□□□ 0.81
PRKCB-210ENST00000498739 CYP2D6P10635 497 aa20.1■□□□□ 0.81
PRKCB-210ENST00000498739 NMIQ13287 307 aaPredicted RBP20.1■□□□□ 0.81
PRKCB-210ENST00000498739 METTL16Q86W50 562 aaKnown RBP20.1■□□□□ 0.81
PRKCB-210ENST00000498739 SKAP1Q86WV1 359 aa20.1■□□□□ 0.81
PRKCB-210ENST00000498739 SERPINB13Q9UIV8 391 aa20.1■□□□□ 0.81
PRKCB-210ENST00000498739 HSPA1AP0DMV8 641 aaKnown RBP20.09■□□□□ 0.81
PRKCB-210ENST00000498739 HSPA1BP0DMV9 641 aaKnown RBP20.09■□□□□ 0.81
PRKCB-210ENST00000498739 EVX2Q03828 476 aa20.09■□□□□ 0.81
PRKCB-210ENST00000498739 PICK1Q9NRD5 415 aa20.09■□□□□ 0.81
PRKCB-210ENST00000498739 DIAPH3Q9NSV4 1193 aa20.09■□□□□ 0.81
PRKCB-210ENST00000498739 CYP2D7A0A087X1C5 515 aa20.08■□□□□ 0.81
PRKCB-210ENST00000498739 MANSC4A6NHS7 340 aaPredicted RBP20.08■□□□□ 0.81
PRKCB-210ENST00000498739 PATL2C9JE40 543 aaKnown RBP20.08■□□□□ 0.81
PRKCB-210ENST00000498739 USP17L12C9JPN9 530 aa20.08■□□□□ 0.81
PRKCB-210ENST00000498739 USP17L21D6R901 530 aa20.08■□□□□ 0.81
PRKCB-210ENST00000498739 CAP2P40123 477 aa20.08■□□□□ 0.81
PRKCB-210ENST00000498739 PPATQ06203 517 aa20.08■□□□□ 0.81
PRKCB-210ENST00000498739 SREBF2Q12772 1141 aa20.08■□□□□ 0.81
PRKCB-210ENST00000498739 RRP1BQ14684 758 aaKnown RBP20.08■□□□□ 0.81
PRKCB-210ENST00000498739 MCMDC2Q4G0Z9 681 aa20.08■□□□□ 0.81
PRKCB-210ENST00000498739 REM2Q8IYK8 340 aaPredicted RBP20.08■□□□□ 0.81
PRKCB-210ENST00000498739 BEGAINQ9BUH8 593 aa20.08■□□□□ 0.81
PRKCB-210ENST00000498739 EPB41L4AQ9HCS5 686 aaPredicted RBP20.08■□□□□ 0.81
PRKCB-210ENST00000498739 WBP1LQ9NX94 342 aa20.08■□□□□ 0.81
PRKCB-210ENST00000498739 ARPP21Q9UBL0 812 aaPredicted RBP20.08■□□□□ 0.81
PRKCB-210ENST00000498739 HIP1O00291 1037 aa20.07■□□□□ 0.8
PRKCB-210ENST00000498739 TDO2P48775 406 aa20.07■□□□□ 0.8
PRKCB-210ENST00000498739 PPIL2Q13356 520 aa20.07■□□□□ 0.8
PRKCB-210ENST00000498739 GIMAP6Q6P9H5 292 aa20.07■□□□□ 0.8
PRKCB-210ENST00000498739 CTR9Q6PD62 1173 aa20.07■□□□□ 0.8
PRKCB-210ENST00000498739 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.07■□□□□ 0.8
PRKCB-210ENST00000498739 DOCK1Q14185 1865 aa20.07■□□□□ 0.8
PRKCB-210ENST00000498739 IRF6O14896 467 aa20.06■□□□□ 0.8
PRKCB-210ENST00000498739 GDF11O95390 407 aa20.06■□□□□ 0.8
PRKCB-210ENST00000498739 PTPRAP18433 802 aa20.06■□□□□ 0.8
PRKCB-210ENST00000498739 C12orf60Q5U649 245 aa20.06■□□□□ 0.8
PRKCB-210ENST00000498739 CWC27Q6UX04 472 aaKnown RBP20.06■□□□□ 0.8
PRKCB-210ENST00000498739 IFNL3Q8IZI9 196 aa20.06■□□□□ 0.8
PRKCB-210ENST00000498739 DYNLL2Q96FJ2 89 aa20.06■□□□□ 0.8
PRKCB-210ENST00000498739 NACAP1Q9BZK3 213 aa20.06■□□□□ 0.8
PRKCB-210ENST00000498739 ZHX2Q9Y6X8 837 aa20.06■□□□□ 0.8
PRKCB-210ENST00000498739 GTF2A2P52657 109 aa20.05■□□□□ 0.8
PRKCB-210ENST00000498739 GABPAQ06546 454 aa20.05■□□□□ 0.8
PRKCB-210ENST00000498739 TATDN1Q6P1N9 297 aa20.05■□□□□ 0.8
PRKCB-210ENST00000498739 ZNF589Q86UQ0 364 aaPredicted RBP20.05■□□□□ 0.8
PRKCB-210ENST00000498739 CCDC84Q86UT8 332 aaPredicted RBP20.05■□□□□ 0.8
PRKCB-210ENST00000498739 NAPBQ9H115 298 aa20.05■□□□□ 0.8
PRKCB-210ENST00000498739 BAZ2AQ9UIF9 1905 aaKnown RBP20.05■□□□□ 0.8
PRKCB-210ENST00000498739 CCDC171Q6TFL3 1326 aa20.04■□□□□ 0.8
PRKCB-210ENST00000498739 MINDY4BA8MYZ0 360 aa20.04■□□□□ 0.8
PRKCB-210ENST00000498739 SMIM22K7EJ46 135 aa20.04■□□□□ 0.8
PRKCB-210ENST00000498739 SHMT1P34896 483 aa20.04■□□□□ 0.8
PRKCB-210ENST00000498739 TM4SF4P48230 202 aa20.04■□□□□ 0.8
PRKCB-210ENST00000498739 INHBEP58166 350 aa20.04■□□□□ 0.8
PRKCB-210ENST00000498739 SHROOM1Q2M3G4 852 aaPredicted RBP20.04■□□□□ 0.8
PRKCB-210ENST00000498739 CERKLQ49MI3 558 aaPredicted RBP20.04■□□□□ 0.8
PRKCB-210ENST00000498739 SBK1Q52WX2 424 aa20.04■□□□□ 0.8
PRKCB-210ENST00000498739 VPS53Q5VIR6 699 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms