RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 GPSM2P81274 684 aa7.04□□□□□ -1.28
FXN-205ENST00000498653 VARS2Q5ST30 1063 aaKnown RBP7.04□□□□□ -1.28
FXN-205ENST00000498653 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.04□□□□□ -1.28
FXN-205ENST00000498653 BMP8AQ7Z5Y6 402 aa7.04□□□□□ -1.28
FXN-205ENST00000498653 L3MBTL2Q969R5 705 aa7.04□□□□□ -1.28
FXN-205ENST00000498653 MXD3Q9BW11 206 aa7.04□□□□□ -1.28
FXN-205ENST00000498653 SENP6Q9GZR1 1112 aaPredicted RBP7.04□□□□□ -1.28
FXN-205ENST00000498653 DLL3Q9NYJ7 618 aa7.04□□□□□ -1.28
FXN-205ENST00000498653 FAM205CA6NFA0 338 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 H0Y858 1186 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 C6orf229H3BNL8 230 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 PDHXO00330 501 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 TNPO2O14787 897 aaKnown RBP7.03□□□□□ -1.28
FXN-205ENST00000498653 KRT38O76015 456 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 RASIP1Q5U651 963 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 KRT40Q6A162 431 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 ANKRD23Q86SG2 305 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 TTC5Q8N0Z6 440 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 TBC1D16Q8TBP0 767 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 NLRP3Q96P20 1036 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 NKX2-4Q9H2Z4 354 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 TLR9Q9NR96 1032 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 NSFL1CQ9UNZ2 370 aaKnown RBP7.03□□□□□ -1.28
FXN-205ENST00000498653 ATP11BQ9Y2G3 1177 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 YBX2Q9Y2T7 364 aaKnown RBP7.03□□□□□ -1.28
FXN-205ENST00000498653 DAGLAQ9Y4D2 1042 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 PTPN13Q12923 2485 aa7.03□□□□□ -1.28
FXN-205ENST00000498653 IRF6O14896 467 aa7.02□□□□□ -1.29
FXN-205ENST00000498653 VCPP55072 806 aaKnown RBP7.02□□□□□ -1.29
FXN-205ENST00000498653 SNAPC2Q13487 334 aa7.02□□□□□ -1.29
FXN-205ENST00000498653 MOGSQ13724 837 aa7.02□□□□□ -1.29
FXN-205ENST00000498653 SUPT20HL1Q3ZLR7 823 aa7.02□□□□□ -1.29
FXN-205ENST00000498653 ZNF790Q6PG37 636 aa7.02□□□□□ -1.29
FXN-205ENST00000498653 CCDC129Q6ZRS4 1044 aa7.02□□□□□ -1.29
FXN-205ENST00000498653 GPIHBP1Q8IV16 184 aa7.02□□□□□ -1.29
FXN-205ENST00000498653 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.02□□□□□ -1.291e-9■■■■■ 38.8
FXN-205ENST00000498653 TRIB2Q92519 343 aa7.02□□□□□ -1.29
FXN-205ENST00000498653 EYA3Q99504 573 aa7.02□□□□□ -1.29
FXN-205ENST00000498653 IRF2BPLQ9H1B7 796 aa7.02□□□□□ -1.29
FXN-205ENST00000498653 SNCAIPQ9Y6H5 919 aa7.02□□□□□ -1.29
FXN-205ENST00000498653 USP17L3A6NCW0 530 aa7.01□□□□□ -1.29
FXN-205ENST00000498653 USP17L4A6NCW7 530 aa7.01□□□□□ -1.29
FXN-205ENST00000498653 PTPREP23469 700 aa7.01□□□□□ -1.29
FXN-205ENST00000498653 GPTP24298 496 aa7.01□□□□□ -1.29
FXN-205ENST00000498653 USP17L1Q7RTZ2 530 aa7.01□□□□□ -1.29
FXN-205ENST00000498653 TMC4Q7Z404 712 aa7.01□□□□□ -1.29
FXN-205ENST00000498653 CDAN1Q8IWY9 1227 aa7.01□□□□□ -1.29
FXN-205ENST00000498653 USP16Q9Y5T5 823 aa7.01□□□□□ -1.29
FXN-205ENST00000498653 WDFY3Q8IZQ1 3526 aa7.01□□□□□ -1.29
FXN-205ENST00000498653 AOX1Q06278 1338 aa7.01□□□□□ -1.29
FXN-205ENST00000498653 CYP2C8P10632 490 aa7□□□□□ -1.29
FXN-205ENST00000498653 IRS1P35568 1242 aa7□□□□□ -1.29
FXN-205ENST00000498653 SNX17Q15036 470 aa7□□□□□ -1.29
FXN-205ENST00000498653 TRIM60Q495X7 471 aa7□□□□□ -1.29
FXN-205ENST00000498653 SLC10A5Q5PT55 438 aa7□□□□□ -1.29
FXN-205ENST00000498653 DACT2Q5SW24 774 aa7□□□□□ -1.29
FXN-205ENST00000498653 GADD45GIP1Q8TAE8 222 aaPredicted RBP7□□□□□ -1.29
FXN-205ENST00000498653 HS3ST6Q96QI5 342 aa7□□□□□ -1.29
FXN-205ENST00000498653 BUD13Q9BRD0 619 aaKnown RBP eCLIP7□□□□□ -1.299e-6■■■■■ 27.7
FXN-205ENST00000498653 POLKQ9UBT6 870 aa7□□□□□ -1.29
FXN-205ENST00000498653 RPAP1Q9BWH6 1393 aaPredicted RBP6.99□□□□□ -1.29
FXN-205ENST00000498653 EPOPA6NHQ4 379 aa6.99□□□□□ -1.29
FXN-205ENST00000498653 RFXAPO00287 272 aa6.99□□□□□ -1.29
FXN-205ENST00000498653 FPGSQ05932 587 aa6.99□□□□□ -1.29
FXN-205ENST00000498653 ZP2Q05996 745 aa6.99□□□□□ -1.29
FXN-205ENST00000498653 PPIL2Q13356 520 aa6.99□□□□□ -1.29
FXN-205ENST00000498653 RAB30Q15771 203 aa6.99□□□□□ -1.29
FXN-205ENST00000498653 PKN1Q16512 942 aa6.99□□□□□ -1.29
FXN-205ENST00000498653 C6orf132Q5T0Z8 1188 aa6.99□□□□□ -1.29
FXN-205ENST00000498653 OGFOD1Q8N543 542 aa6.99□□□□□ -1.29
FXN-205ENST00000498653 NKD2Q969F2 451 aaPredicted RBP6.99□□□□□ -1.29
FXN-205ENST00000498653 PUS7Q96PZ0 661 aaKnown RBP6.99□□□□□ -1.29
FXN-205ENST00000498653 PARK7Q99497 189 aaKnown RBP6.99□□□□□ -1.29
FXN-205ENST00000498653 HNRNPABQ99729 332 aaKnown RBP6.99□□□□□ -1.29
FXN-205ENST00000498653 ADAM33Q9BZ11 813 aa6.99□□□□□ -1.29
FXN-205ENST00000498653 ZC3H12CQ9C0D7 883 aaKnown RBP6.99□□□□□ -1.29
FXN-205ENST00000498653 SLC28A3Q9HAS3 691 aa6.99□□□□□ -1.29
FXN-205ENST00000498653 KCNH4Q9UQ05 1017 aa6.99□□□□□ -1.29
FXN-205ENST00000498653 CEP295Q9C0D2 2601 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 TENM4Q6N022 2769 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 MYO18BQ8IUG5 2567 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 TMEM221A6NGB7 291 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 M0R296 226 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 CCND3P30281 292 aaPredicted RBP6.98□□□□□ -1.29
FXN-205ENST00000498653 LEXMQ3ZCV2 418 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 HERC4Q5GLZ8 1057 aaPredicted RBP6.98□□□□□ -1.29
FXN-205ENST00000498653 DDX46Q7L014 1031 aaKnown RBP6.98□□□□□ -1.29
FXN-205ENST00000498653 FRMD5Q7Z6J6 570 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 ERO1BQ86YB8 467 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 SUGP1Q8IWZ8 645 aaKnown RBP6.98□□□□□ -1.29
FXN-205ENST00000498653 ZNF34Q8IZ26 560 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 ZNF687Q8N1G0 1237 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 FBXL6Q8N531 539 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 PBXIP1Q96AQ6 731 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 FMNL2Q96PY5 1086 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 BSDC1Q9NW68 430 aaPredicted RBP6.98□□□□□ -1.29
FXN-205ENST00000498653 MUTYHQ9UIF7 546 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 PCDHAC2Q9Y5I4 1007 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 OTOGLQ3ZCN5 2332 aa6.98□□□□□ -1.29
FXN-205ENST00000498653 ITPR1Q14643 2758 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms