RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 AKNAD1Q5T1N1 836 aa22.64■■□□□ 1.21
NKX2-1-202ENST00000498187 METTL16Q86W50 562 aaKnown RBP22.64■■□□□ 1.21
NKX2-1-202ENST00000498187 UBXN4Q92575 508 aa22.64■■□□□ 1.21
NKX2-1-202ENST00000498187 CNNM2Q9H8M5 875 aa22.64■■□□□ 1.21
NKX2-1-202ENST00000498187 GSG1L2A8MUP6 293 aa22.63■■□□□ 1.21
NKX2-1-202ENST00000498187 IL6STP40189 918 aaPredicted RBP22.63■■□□□ 1.21
NKX2-1-202ENST00000498187 CLCN6P51797 869 aa22.63■■□□□ 1.21
NKX2-1-202ENST00000498187 FCHSD1Q86WN1 690 aa22.63■■□□□ 1.21
NKX2-1-202ENST00000498187 TMX1Q9H3N1 280 aa22.63■■□□□ 1.21
NKX2-1-202ENST00000498187 KCNH3Q9ULD8 1083 aa22.63■■□□□ 1.21
NKX2-1-202ENST00000498187 DISP2A7MBM2 1401 aa22.63■■□□□ 1.21
NKX2-1-202ENST00000498187 KRBA2Q6ZNG9 492 aa22.63■■□□□ 1.21
NKX2-1-202ENST00000498187 MFSD6Q6ZSS7 791 aa22.63■■□□□ 1.21
NKX2-1-202ENST00000498187 KRT23Q9C075 422 aa22.63■■□□□ 1.21
NKX2-1-202ENST00000498187 PRKAB2O43741 272 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 IFNAR1P17181 557 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 GUCY1A2P33402 732 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 CFAP100Q494V2 611 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 RRP12Q5JTH9 1297 aaKnown RBP22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 NOSTRINQ8IVI9 506 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 CNNM3Q8NE01 707 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 DPF2Q92785 391 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 ROBO1Q9Y6N7 1651 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 ZSCAN12O43309 604 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 TPM1P09493 284 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 OLFM4Q6UX06 510 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 LRRN4CLQ8ND94 238 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 MNS1Q8NEH6 495 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 WASF1Q92558 559 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 ZKSCAN3Q9BRR0 538 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 TOMM22Q9NS69 142 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 FHOD1Q9Y613 1164 aa22.62■■□□□ 1.21
NKX2-1-202ENST00000498187 BTBD18B2RXH4 712 aa22.61■■□□□ 1.21
NKX2-1-202ENST00000498187 LCORLQ8N3X6 602 aa22.61■■□□□ 1.21
NKX2-1-202ENST00000498187 KRI1Q8N9T8 703 aaKnown RBP22.61■■□□□ 1.21
NKX2-1-202ENST00000498187 MPHOSPH8Q99549 860 aa22.61■■□□□ 1.21
NKX2-1-202ENST00000498187 PLCH1Q4KWH8 1693 aa22.61■■□□□ 1.21
NKX2-1-202ENST00000498187 MMP1P03956 469 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 TOP1P11387 765 aaKnown RBP22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 TDO2P48775 406 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 TRIM65Q6PJ69 517 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 FOXP4Q8IVH2 680 aaPredicted RBP22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 VSTM4Q8IW00 320 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 STK11IPQ8N1F8 1099 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 NOL10Q9BSC4 688 aaKnown RBP22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 SEC31BQ9NQW1 1179 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 PCDHA5Q9Y5H7 936 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 NID2Q14112 1375 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 PIP4K2BP78356 416 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 SPECC1Q5M775 1068 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 SUSD4Q5VX71 490 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 TMCO3Q6UWJ1 677 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 DIS3L2Q8IYB7 885 aaKnown RBP22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 AK7Q96M32 723 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 KCNJ14Q9UNX9 436 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 SLC4A4Q9Y6R1 1079 aa22.6■■□□□ 1.21
NKX2-1-202ENST00000498187 SAFBQ15424 915 aaKnown RBP eCLIP22.59■■□□□ 1.21
NKX2-1-202ENST00000498187 RTN1Q16799 776 aa22.59■■□□□ 1.21
NKX2-1-202ENST00000498187 STAG1Q8WVM7 1258 aa22.59■■□□□ 1.21
NKX2-1-202ENST00000498187 UTP14AQ9BVJ6 771 aaKnown RBP22.59■■□□□ 1.21
NKX2-1-202ENST00000498187 COL22A1Q8NFW1 1626 aaPredicted RBP22.59■■□□□ 1.21
NKX2-1-202ENST00000498187 TOB1P50616 345 aaPredicted RBP22.59■■□□□ 1.21
NKX2-1-202ENST00000498187 WTAPQ15007 396 aa22.59■■□□□ 1.21
NKX2-1-202ENST00000498187 TRIM22Q8IYM9 498 aa22.59■■□□□ 1.21
NKX2-1-202ENST00000498187 NACAP1Q9BZK3 213 aa22.59■■□□□ 1.21
NKX2-1-202ENST00000498187 EFCAB8A8MWE9 144 aa22.58■■□□□ 1.21
NKX2-1-202ENST00000498187 FOXN1O15353 648 aa22.58■■□□□ 1.21
NKX2-1-202ENST00000498187 PNMA6AP0CW24 399 aaPredicted RBP22.58■■□□□ 1.21
NKX2-1-202ENST00000498187 SART3Q15020 963 aaKnown RBP22.58■■□□□ 1.21
NKX2-1-202ENST00000498187 BCORQ6W2J9 1755 aa22.58■■□□□ 1.21
NKX2-1-202ENST00000498187 ARHGAP6O43182 974 aa22.58■■□□□ 1.2
NKX2-1-202ENST00000498187 URI1O94763 535 aaPredicted RBP22.58■■□□□ 1.2
NKX2-1-202ENST00000498187 GNAT2P19087 354 aa22.58■■□□□ 1.2
NKX2-1-202ENST00000498187 BCAMP50895 628 aa22.58■■□□□ 1.2
NKX2-1-202ENST00000498187 REXO1L1PQ8IX06 675 aa22.58■■□□□ 1.2
NKX2-1-202ENST00000498187 CCDC82Q8N4S0 544 aa22.58■■□□□ 1.2
NKX2-1-202ENST00000498187 FANCLQ9NW38 375 aa22.58■■□□□ 1.2
NKX2-1-202ENST00000498187 PNPLA7Q6ZV29 1317 aa22.57■■□□□ 1.2
NKX2-1-202ENST00000498187 CMTR1Q8N1G2 835 aaKnown RBP22.57■■□□□ 1.2
NKX2-1-202ENST00000498187 ST7Q9NRC1 585 aa22.57■■□□□ 1.2
NKX2-1-202ENST00000498187 AHDC1Q5TGY3 1603 aaPredicted RBP22.57■■□□□ 1.2
NKX2-1-202ENST00000498187 GOLGA6L9A6NEM1 432 aa22.57■■□□□ 1.2
NKX2-1-202ENST00000498187 ZRANB2O95218 330 aaKnown RBP eCLIP22.57■■□□□ 1.2
NKX2-1-202ENST00000498187 BMP6P22004 513 aa22.57■■□□□ 1.2
NKX2-1-202ENST00000498187 MDM2Q00987 491 aaPredicted RBP22.57■■□□□ 1.2
NKX2-1-202ENST00000498187 GRIN1Q05586 938 aa22.57■■□□□ 1.2
NKX2-1-202ENST00000498187 PDE4BQ07343 736 aa22.57■■□□□ 1.2
NKX2-1-202ENST00000498187 MIGA1Q8NAN2 632 aa22.57■■□□□ 1.2
NKX2-1-202ENST00000498187 ERICH2A1L162 156 aa22.56■■□□□ 1.2
NKX2-1-202ENST00000498187 ATP8B1O43520 1251 aa22.56■■□□□ 1.2
NKX2-1-202ENST00000498187 FOXP1Q9H334 677 aaPredicted RBP22.56■■□□□ 1.2
NKX2-1-202ENST00000498187 FBXO2Q9UK22 296 aaPredicted RBP22.56■■□□□ 1.2
NKX2-1-202ENST00000498187 TMEM232C9JQI7 657 aa22.56■■□□□ 1.2
NKX2-1-202ENST00000498187 TADA3O75528 432 aa22.56■■□□□ 1.2
NKX2-1-202ENST00000498187 HOOK1Q9UJC3 728 aaKnown RBP22.56■■□□□ 1.2
NKX2-1-202ENST00000498187 EXOC5O00471 708 aa22.55■■□□□ 1.2
NKX2-1-202ENST00000498187 DEXIO95424 95 aa22.55■■□□□ 1.2
NKX2-1-202ENST00000498187 PTPREP23469 700 aa22.55■■□□□ 1.2
NKX2-1-202ENST00000498187 RILPL1Q5EBL4 403 aa22.55■■□□□ 1.2
NKX2-1-202ENST00000498187 ELOA2Q8IYF1 753 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms