RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 IFNL1Q8IU54 200 aa9.16□□□□□ -0.94
CDHR3-214ENST00000496633 TNS4Q8IZW8 715 aa9.16□□□□□ -0.94
CDHR3-214ENST00000496633 KBTBD3Q8NAB2 608 aa9.16□□□□□ -0.94
CDHR3-214ENST00000496633 SH3RF3Q8TEJ3 882 aaPredicted RBP9.16□□□□□ -0.94
CDHR3-214ENST00000496633 ZNF384Q8TF68 577 aa9.16□□□□□ -0.94
CDHR3-214ENST00000496633 TGFBRAP1Q8WUH2 860 aa9.16□□□□□ -0.94
CDHR3-214ENST00000496633 OTUD5Q96G74 571 aa9.16□□□□□ -0.94
CDHR3-214ENST00000496633 CLMNQ96JQ2 1002 aa9.16□□□□□ -0.94
CDHR3-214ENST00000496633 EHD4Q9H223 541 aa9.16□□□□□ -0.94
CDHR3-214ENST00000496633 BOLA2Q9H3K6 86 aa9.16□□□□□ -0.94
CDHR3-214ENST00000496633 ZFYVE28Q9HCC9 887 aa9.16□□□□□ -0.94
CDHR3-214ENST00000496633 SUPT16HQ9Y5B9 1047 aaKnown RBP9.16□□□□□ -0.94
CDHR3-214ENST00000496633 ZNF532Q9HCE3 1301 aa9.15□□□□□ -0.94
CDHR3-214ENST00000496633 MX1P20591 662 aa9.15□□□□□ -0.94
CDHR3-214ENST00000496633 ADD2P35612 726 aa9.15□□□□□ -0.94
CDHR3-214ENST00000496633 NBR1Q14596 966 aa9.15□□□□□ -0.94
CDHR3-214ENST00000496633 GIMAP6Q6P9H5 292 aa9.15□□□□□ -0.94
CDHR3-214ENST00000496633 SPRYD3Q8NCJ5 442 aa9.15□□□□□ -0.94
CDHR3-214ENST00000496633 ZNF287Q9HBT7 754 aa9.15□□□□□ -0.94
CDHR3-214ENST00000496633 SERPINB13Q9UIV8 391 aa9.15□□□□□ -0.94
CDHR3-214ENST00000496633 KCNH4Q9UQ05 1017 aa9.15□□□□□ -0.94
CDHR3-214ENST00000496633 SLC45A1Q9Y2W3 748 aa9.15□□□□□ -0.94
CDHR3-214ENST00000496633 SNCAIPQ9Y6H5 919 aa9.15□□□□□ -0.94
CDHR3-214ENST00000496633 FOCADQ5VW36 1801 aa9.15□□□□□ -0.95
CDHR3-214ENST00000496633 CCL15-CCL14A0A0B4J2E2 113 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 DDTLA6NHG4 134 aaPredicted RBP9.14□□□□□ -0.95
CDHR3-214ENST00000496633 PHF20L1A8MW92 1017 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 GNRH1P01148 92 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 POLR3DP05423 398 aaPredicted RBP9.14□□□□□ -0.95
CDHR3-214ENST00000496633 CAP2P40123 477 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 KIF22Q14807 665 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 CCL15Q16663 113 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 MAPKAPK5Q8IW41 473 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 SMC5Q8IY18 1101 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 ZKSCAN4Q969J2 545 aaPredicted RBP9.14□□□□□ -0.95
CDHR3-214ENST00000496633 ERO1AQ96HE7 468 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 MS4A4AQ96JQ5 239 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 RIOK1Q9BRS2 568 aaKnown RBP9.14□□□□□ -0.95
CDHR3-214ENST00000496633 NACAP1Q9BZK3 213 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 BCL11AQ9H165 835 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 ANTXR1Q9H6X2 564 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 DDX4Q9NQI0 724 aaKnown RBP9.14□□□□□ -0.95
CDHR3-214ENST00000496633 SWAP70Q9UH65 585 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 PNMA3Q9UL41 463 aa9.14□□□□□ -0.95
CDHR3-214ENST00000496633 OTOFQ9HC10 1997 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 TCRBV5S4A2TA0A5A2 114 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 USP17L5A8MUK1 530 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 C19orf81C9J6K1 198 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 GPR25O00155 361 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 IRF6O14896 467 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 SMARCA5O60264 1052 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-214ENST00000496633 FKTNO75072 461 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 PTPRAP18433 802 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 INPP5BP32019 993 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 MKRN3Q13064 507 aaKnown RBP9.13□□□□□ -0.95
CDHR3-214ENST00000496633 TAF1CQ15572 869 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-214ENST00000496633 ANKRD23Q86SG2 305 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 CDAN1Q8IWY9 1227 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 MIGA1Q8NAN2 632 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 PROCA1Q8NCQ7 364 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-214ENST00000496633 APPBP2Q92624 585 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 EVI5LQ96CN4 794 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 ZIC5Q96T25 663 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 CABP5Q9NP86 173 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 STAP2Q9UGK3 403 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 ZHX2Q9Y6X8 837 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 MYH7P12883 1935 aa9.13□□□□□ -0.95
CDHR3-214ENST00000496633 HIP1O00291 1037 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 RNF113AO15541 343 aaKnown RBP9.12□□□□□ -0.95
CDHR3-214ENST00000496633 SLC3A2P08195 630 aaKnown RBP9.12□□□□□ -0.95
CDHR3-214ENST00000496633 USP14P54578 494 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 MFAP1P55081 439 aaKnown RBP9.12□□□□□ -0.95
CDHR3-214ENST00000496633 DYNLL1P63167 89 aaKnown RBP9.12□□□□□ -0.95
CDHR3-214ENST00000496633 COL13A1Q5TAT6 717 aaPredicted RBP9.12□□□□□ -0.95
CDHR3-214ENST00000496633 IFFO2Q5TF58 517 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 SH3BP5LQ7L8J4 393 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 CTU1Q7Z7A3 348 aaKnown RBP9.12□□□□□ -0.95
CDHR3-214ENST00000496633 ADGRA1Q86SQ6 560 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 CHD1LQ86WJ1 897 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 ZFPM1Q8IX07 1006 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 ZNF280CQ8ND82 737 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 CCDC17Q96LX7 622 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 PARK7Q99497 189 aaKnown RBP9.12□□□□□ -0.95
CDHR3-214ENST00000496633 FSD1Q9BTV5 496 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 WDR18Q9BV38 432 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 SH2D4AQ9H788 454 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 MCM9Q9NXL9 1143 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 TMOD4Q9NZQ9 345 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 ARPP21Q9UBL0 812 aaPredicted RBP9.12□□□□□ -0.95
CDHR3-214ENST00000496633 PALD1Q9ULE6 856 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 FZD1Q9UP38 647 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 DOCK1Q14185 1865 aa9.12□□□□□ -0.95
CDHR3-214ENST00000496633 MYO5AQ9Y4I1 1855 aaKnown RBP9.11□□□□□ -0.95
CDHR3-214ENST00000496633 A0A0G2JLL6 359 aaPredicted RBP9.11□□□□□ -0.95
CDHR3-214ENST00000496633 IGF2BP3O00425 579 aaKnown RBP eCLIP9.11□□□□□ -0.95
CDHR3-214ENST00000496633 TLR2O60603 784 aa9.11□□□□□ -0.95
CDHR3-214ENST00000496633 HOXD10P28358 340 aa9.11□□□□□ -0.95
CDHR3-214ENST00000496633 NT5C2P49902 561 aa9.11□□□□□ -0.95
CDHR3-214ENST00000496633 PDE1AP54750 535 aa9.11□□□□□ -0.95
CDHR3-214ENST00000496633 PRMT2P55345 433 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms