RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 CORO1CQ9ULV4 474 aaPredicted RBP9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 ERBB3P21860 1342 aa9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 GCOM1H8Y6P7 765 aaPredicted RBP9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 PPP1R37O75864 691 aa9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 FLOT1O75955 427 aa9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 FCHSD2O94868 740 aa9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 PYGLP06737 847 aa9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 MYZAPP0CAP1 466 aa9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 KRT83P78385 493 aa9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 PRPF4BQ13523 1007 aaKnown RBP9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 DPCR1Q3MIW9 517 aa9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 NAA35Q5VZE5 725 aa9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 CCDC80Q76M96 950 aa9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 HVCN1Q96D96 273 aa9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 FGD4Q96M96 766 aa9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 MMADHCQ9H3L0 296 aaPredicted RBP9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 TMEM165Q9HC07 324 aa9.15□□□□□ -0.94
CRNKL1-205ENST00000496549 ATP10AO60312 1499 aa9.15□□□□□ -0.95
CRNKL1-205ENST00000496549 CFAP73A6NFT4 308 aa9.15□□□□□ -0.95
CRNKL1-205ENST00000496549 ECEL1O95672 775 aa9.15□□□□□ -0.95
CRNKL1-205ENST00000496549 NEXNQ0ZGT2 675 aa9.15□□□□□ -0.95
CRNKL1-205ENST00000496549 CWF19L1Q69YN2 538 aaKnown RBP9.15□□□□□ -0.95
CRNKL1-205ENST00000496549 WDR93Q6P2C0 686 aa9.15□□□□□ -0.95
CRNKL1-205ENST00000496549 SIRT2Q8IXJ6 389 aa9.15□□□□□ -0.95
CRNKL1-205ENST00000496549 IFT20Q8IY31 132 aa9.15□□□□□ -0.95
CRNKL1-205ENST00000496549 CCDC197Q8NCU1 140 aa9.15□□□□□ -0.95
CRNKL1-205ENST00000496549 CTNNBL1Q8WYA6 563 aaPredicted RBP9.15□□□□□ -0.95
CRNKL1-205ENST00000496549 KCNB2Q92953 911 aa9.15□□□□□ -0.95
CRNKL1-205ENST00000496549 BPIFA3Q9BQP9 254 aa9.15□□□□□ -0.95
CRNKL1-205ENST00000496549 FSD1Q9BTV5 496 aa9.15□□□□□ -0.95
CRNKL1-205ENST00000496549 ANKZF1Q9H8Y5 726 aa9.15□□□□□ -0.95
CRNKL1-205ENST00000496549 KIF24Q5T7B8 1368 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 VAMP4O75379 141 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 PAK2Q13177 524 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 ME3Q16798 604 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 MUM1Q2TAK8 710 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 C8orf74Q6P047 294 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 CCDC65Q8IXS2 484 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 C17orf50Q8WW18 174 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 CCT8L2Q96SF2 557 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 FANCLQ9NW38 375 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 LARSQ9P2J5 1176 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 C15orf41Q9Y2V0 281 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 ANP32DO95626 131 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 FESP07332 822 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 EIF2S2P20042 333 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 USP14P54578 494 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 IFI16Q16666 785 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 CCDC122Q5T0U0 273 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 FUKQ8N0W3 1084 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 MAB21L3Q8N8X9 362 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 SLC12A5Q9H2X9 1139 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 ABCC4O15439 1325 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 KDM4FA0A1W2PPD8 638 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 TARSL2A2RTX5 802 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 EME2A4GXA9 379 aaPredicted RBP9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 ANKRD33BA6NCL7 494 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 CNGA1P29973 690 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 LSP1P33241 339 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 CYLC1P35663 651 aaPredicted RBP9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 GCLCP48506 637 aaPredicted RBP9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 GUCY1B3Q02153 619 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 GOLGA8FQ08AF8 430 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 GOLGA8DPQ0D2H9 430 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 SEPT6Q14141 434 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 RBM12BQ8IXT5 1001 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 STK38LQ9Y2H1 464 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 FANCAO15360 1455 aa9.14□□□□□ -0.95
CRNKL1-205ENST00000496549 TTC21AQ8NDW8 1320 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 SPTLC2O15270 562 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 ZMYND10O75800 440 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 ZNF189O75820 626 aaPredicted RBP9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 CYP26C1Q6V0L0 522 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 TBC1D1Q86TI0 1168 aaPredicted RBP9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 CCDC51Q96ER9 411 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 MEIS3Q99687 375 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 E9PCH4 1651 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 A0A087WWV3 80 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 DTNBO60941 627 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 HNRNPCP07910 306 aaKnown RBP eCLIP9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 IDEP14735 1019 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 NFE2L2Q16236 605 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 EMBQ6PCB8 327 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 TOGARAM2Q6ZUX3 1019 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 BZW1Q7L1Q6 419 aaKnown RBP9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 ARHGEF25Q86VW2 580 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 IFT81Q8WYA0 676 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 GORASP1Q9BQQ3 440 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 LUC7LQ9NQ29 371 aaKnown RBP9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 HMGB1P1B2RPK0 211 aaPredicted RBP9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 EVI5O60447 810 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 TACC1O75410 805 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 FAM107AO95990 144 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 SLC4A2P04920 1241 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 CC2D2BQ6DHV5 1058 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 ARHGAP18Q8N392 663 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 PHF23Q9BUL5 403 aaPredicted RBP9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 HMG20BQ9P0W2 317 aa9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 TROQ12816 1431 aaPredicted RBP9.13□□□□□ -0.95
CRNKL1-205ENST00000496549 SYNMO15061 1565 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms