RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 FILIP1Q7Z7B0 1213 aa17.25■□□□□ 0.35
UBXN11-216ENST00000496466 STAG1Q8WVM7 1258 aa17.25■□□□□ 0.35
UBXN11-216ENST00000496466 NYXQ9GZU5 481 aa17.25■□□□□ 0.35
UBXN11-216ENST00000496466 GNL3LQ9NVN8 582 aaKnown RBP17.25■□□□□ 0.35
UBXN11-216ENST00000496466 RAI14Q9P0K7 980 aa17.25■□□□□ 0.35
UBXN11-216ENST00000496466 PRDM4Q9UKN5 801 aa17.25■□□□□ 0.35
UBXN11-216ENST00000496466 RTCBQ9Y3I0 505 aaKnown RBP17.25■□□□□ 0.35
UBXN11-216ENST00000496466 CASZ1Q86V15 1759 aa17.25■□□□□ 0.35
UBXN11-216ENST00000496466 KLRK1P26718 216 aa17.25■□□□□ 0.35
UBXN11-216ENST00000496466 SYKP43405 635 aa17.25■□□□□ 0.35
UBXN11-216ENST00000496466 NBPF11Q86T75 865 aa17.25■□□□□ 0.35
UBXN11-216ENST00000496466 STK11IPQ8N1F8 1099 aa17.25■□□□□ 0.35
UBXN11-216ENST00000496466 JMYQ8N9B5 988 aa17.25■□□□□ 0.35
UBXN11-216ENST00000496466 ARHGEF1Q92888 912 aaKnown RBP17.25■□□□□ 0.35
UBXN11-216ENST00000496466 FAM84BQ96KN1 310 aaPredicted RBP17.25■□□□□ 0.35
UBXN11-216ENST00000496466 NACAP1Q9BZK3 213 aa17.25■□□□□ 0.35
UBXN11-216ENST00000496466 THSD7AQ9UPZ6 1657 aa17.24■□□□□ 0.35
UBXN11-216ENST00000496466 NID2Q14112 1375 aa17.24■□□□□ 0.35
UBXN11-216ENST00000496466 FAM237AA0A1B0GTK4 181 aa17.24■□□□□ 0.35
UBXN11-216ENST00000496466 TNNT1P13805 278 aa17.24■□□□□ 0.35
UBXN11-216ENST00000496466 IFNAR1P17181 557 aa17.24■□□□□ 0.35
UBXN11-216ENST00000496466 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
UBXN11-216ENST00000496466 TPD52L1Q16890 204 aaPredicted RBP17.24■□□□□ 0.35
UBXN11-216ENST00000496466 NLRP3Q96P20 1036 aa17.24■□□□□ 0.35
UBXN11-216ENST00000496466 SPATA31A6Q5VVP1 1343 aa17.24■□□□□ 0.35
UBXN11-216ENST00000496466 A0A1B0GUL6 1792 aa17.24■□□□□ 0.35
UBXN11-216ENST00000496466 CCZ1BP86790 482 aa17.24■□□□□ 0.35
UBXN11-216ENST00000496466 CCZ1P86791 482 aaPredicted RBP17.24■□□□□ 0.35
UBXN11-216ENST00000496466 CAVIN4Q5BKX8 364 aa17.24■□□□□ 0.35
UBXN11-216ENST00000496466 RRP12Q5JTH9 1297 aaKnown RBP17.24■□□□□ 0.35
UBXN11-216ENST00000496466 PODXL2Q9NZ53 605 aa17.24■□□□□ 0.35
UBXN11-216ENST00000496466 SKILP12757 684 aa17.23■□□□□ 0.35
UBXN11-216ENST00000496466 NCAPHQ15003 741 aa17.23■□□□□ 0.35
UBXN11-216ENST00000496466 RESP18Q5W5W9 173 aa17.23■□□□□ 0.35
UBXN11-216ENST00000496466 CLIC6Q96NY7 704 aa17.23■□□□□ 0.35
UBXN11-216ENST00000496466 NHSQ6T4R5 1651 aa17.23■□□□□ 0.35
UBXN11-216ENST00000496466 CTIFO43310 598 aaKnown RBP17.22■□□□□ 0.35
UBXN11-216ENST00000496466 GUCY1A2P33402 732 aa17.22■□□□□ 0.35
UBXN11-216ENST00000496466 SDR42E1Q8WUS8 393 aa17.22■□□□□ 0.35
UBXN11-216ENST00000496466 WASF1Q92558 559 aa17.22■□□□□ 0.35
UBXN11-216ENST00000496466 ZKSCAN3Q9BRR0 538 aa17.22■□□□□ 0.35
UBXN11-216ENST00000496466 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.22■□□□□ 0.35
UBXN11-216ENST00000496466 TUBE1Q9UJT0 475 aa17.22■□□□□ 0.35
UBXN11-216ENST00000496466 SMTNL1A8MU46 457 aa17.22■□□□□ 0.35
UBXN11-216ENST00000496466 CUTAO60888 179 aa17.22■□□□□ 0.35
UBXN11-216ENST00000496466 WTAPQ15007 396 aa17.22■□□□□ 0.35
UBXN11-216ENST00000496466 TPTE2Q6XPS3 522 aa17.22■□□□□ 0.35
UBXN11-216ENST00000496466 GJD4Q96KN9 370 aaPredicted RBP17.22■□□□□ 0.35
UBXN11-216ENST00000496466 OSBPL5Q9H0X9 879 aaPredicted RBP17.22■□□□□ 0.35
UBXN11-216ENST00000496466 TOMM22Q9NS69 142 aa17.22■□□□□ 0.35
UBXN11-216ENST00000496466 MAGEB6P1A0A0J9YX57 407 aa17.21■□□□□ 0.35
UBXN11-216ENST00000496466 GSDMDP57764 484 aa17.21■□□□□ 0.35
UBXN11-216ENST00000496466 RTN1Q16799 776 aa17.21■□□□□ 0.35
UBXN11-216ENST00000496466 XPO4Q9C0E2 1151 aaKnown RBP17.21■□□□□ 0.35
UBXN11-216ENST00000496466 IFNKQ9P0W0 207 aa17.21■□□□□ 0.35
UBXN11-216ENST00000496466 IMPACTQ9P2X3 320 aa17.21■□□□□ 0.35
UBXN11-216ENST00000496466 USP27XA6NNY8 438 aa17.21■□□□□ 0.35
UBXN11-216ENST00000496466 SMIM22K7EJ46 135 aa17.21■□□□□ 0.35
UBXN11-216ENST00000496466 TPM4P67936 248 aa17.21■□□□□ 0.35
UBXN11-216ENST00000496466 SART3Q15020 963 aaKnown RBP17.21■□□□□ 0.35
UBXN11-216ENST00000496466 MEX3CQ5U5Q3 659 aaKnown RBP17.21■□□□□ 0.35
UBXN11-216ENST00000496466 ISM2Q6H9L7 571 aa17.21■□□□□ 0.35
UBXN11-216ENST00000496466 FBXO33Q7Z6M2 555 aa17.21■□□□□ 0.35
UBXN11-216ENST00000496466 NOSTRINQ8IVI9 506 aa17.21■□□□□ 0.35
UBXN11-216ENST00000496466 TFCP2L1Q9NZI6 479 aa17.21■□□□□ 0.35
UBXN11-216ENST00000496466 SMC2O95347 1197 aa17.2■□□□□ 0.34
UBXN11-216ENST00000496466 MMP1P03956 469 aa17.2■□□□□ 0.34
UBXN11-216ENST00000496466 ZNF384Q8TF68 577 aa17.2■□□□□ 0.34
UBXN11-216ENST00000496466 MTA3Q9BTC8 594 aa17.2■□□□□ 0.34
UBXN11-216ENST00000496466 COL24A1Q17RW2 1714 aa17.2■□□□□ 0.34
UBXN11-216ENST00000496466 BTBD18B2RXH4 712 aa17.2■□□□□ 0.34
UBXN11-216ENST00000496466 IKBKBO14920 756 aa17.2■□□□□ 0.34
UBXN11-216ENST00000496466 TM4SF1P30408 202 aa17.2■□□□□ 0.34
UBXN11-216ENST00000496466 DYNLL1P63167 89 aaKnown RBP17.2■□□□□ 0.34
UBXN11-216ENST00000496466 PPARAQ07869 468 aa17.2■□□□□ 0.34
UBXN11-216ENST00000496466 PNOCQ13519 176 aa17.2■□□□□ 0.34
UBXN11-216ENST00000496466 RIOK1Q9BRS2 568 aaKnown RBP17.2■□□□□ 0.34
UBXN11-216ENST00000496466 RNF41Q9H4P4 317 aaPredicted RBP17.2■□□□□ 0.34
UBXN11-216ENST00000496466 KCNJ14Q9UNX9 436 aa17.2■□□□□ 0.34
UBXN11-216ENST00000496466 PAXBP1Q9Y5B6 917 aa17.2■□□□□ 0.34
UBXN11-216ENST00000496466 ERICH2A1L162 156 aa17.19■□□□□ 0.34
UBXN11-216ENST00000496466 MINDY4BA8MYZ0 360 aa17.19■□□□□ 0.34
UBXN11-216ENST00000496466 TRIM22Q8IYM9 498 aa17.19■□□□□ 0.34
UBXN11-216ENST00000496466 TMTC2Q8N394 836 aa17.19■□□□□ 0.34
UBXN11-216ENST00000496466 CRACR2BQ8N4Y2 399 aaPredicted RBP17.19■□□□□ 0.34
UBXN11-216ENST00000496466 RFC4P35249 363 aa17.19■□□□□ 0.34
UBXN11-216ENST00000496466 TOB1P50616 345 aaPredicted RBP17.19■□□□□ 0.34
UBXN11-216ENST00000496466 SAFBQ15424 915 aaKnown RBP eCLIP17.19■□□□□ 0.34
UBXN11-216ENST00000496466 LONRF3Q496Y0 759 aa17.19■□□□□ 0.34
UBXN11-216ENST00000496466 CEP135Q66GS9 1140 aa17.19■□□□□ 0.34
UBXN11-216ENST00000496466 TMC6Q7Z403 805 aa17.19■□□□□ 0.34
UBXN11-216ENST00000496466 SLC51AQ86UW1 340 aa17.19■□□□□ 0.34
UBXN11-216ENST00000496466 DIS3L2Q8IYB7 885 aaKnown RBP17.19■□□□□ 0.34
UBXN11-216ENST00000496466 TRAPPC3LQ5T215 181 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 KRBA2Q6ZNG9 492 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 FAM196AQ6ZSG2 479 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 METTL16Q86W50 562 aaKnown RBP17.18■□□□□ 0.34
UBXN11-216ENST00000496466 KRI1Q8N9T8 703 aaKnown RBP17.18■□□□□ 0.34
UBXN11-216ENST00000496466 HSD3B7Q9H2F3 369 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 KCND1Q9NSA2 647 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms