RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 IDH1O75874 414 aaKnown RBP8.8□□□□□ -1
VPS52-221ENST00000495755 DYNLL1P63167 89 aaKnown RBP8.8□□□□□ -1
VPS52-221ENST00000495755 LACTBP83111 547 aaPredicted RBP8.8□□□□□ -1
VPS52-221ENST00000495755 ARHGEF6Q15052 776 aa8.8□□□□□ -1
VPS52-221ENST00000495755 FASTKD5Q7L8L6 764 aaKnown RBP8.8□□□□□ -1
VPS52-221ENST00000495755 MAPKAPK5Q8IW41 473 aa8.8□□□□□ -1
VPS52-221ENST00000495755 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.8□□□□□ -1
VPS52-221ENST00000495755 TGFBRAP1Q8WUH2 860 aa8.8□□□□□ -1
VPS52-221ENST00000495755 ARMC5Q96C12 935 aa8.8□□□□□ -1
VPS52-221ENST00000495755 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.8□□□□□ -1
VPS52-221ENST00000495755 PI4KBQ9UBF8 816 aa8.8□□□□□ -1
VPS52-221ENST00000495755 HERC5Q9UII4 1024 aaKnown RBP8.8□□□□□ -1
VPS52-221ENST00000495755 FLT1P17948 1338 aa8.8□□□□□ -1
VPS52-221ENST00000495755 MAST2Q6P0Q8 1798 aa8.79□□□□□ -1
VPS52-221ENST00000495755 IFIT2P09913 472 aaKnown RBP8.79□□□□□ -1
VPS52-221ENST00000495755 CAP2P40123 477 aa8.79□□□□□ -1
VPS52-221ENST00000495755 MAP3K12Q12852 859 aa8.79□□□□□ -1
VPS52-221ENST00000495755 CCDC84Q86UT8 332 aaPredicted RBP8.79□□□□□ -1
VPS52-221ENST00000495755 FOXP4Q8IVH2 680 aaPredicted RBP8.79□□□□□ -1
VPS52-221ENST00000495755 MAGEB6Q8N7X4 407 aa8.79□□□□□ -1
VPS52-221ENST00000495755 MIGA1Q8NAN2 632 aa8.79□□□□□ -1
VPS52-221ENST00000495755 ARHGAP39Q9C0H5 1083 aa8.79□□□□□ -1
VPS52-221ENST00000495755 CPA4Q9UI42 421 aa8.79□□□□□ -1
VPS52-221ENST00000495755 PALD1Q9ULE6 856 aa8.79□□□□□ -1
VPS52-221ENST00000495755 SLC45A1Q9Y2W3 748 aa8.79□□□□□ -1
VPS52-221ENST00000495755 MYO5AQ9Y4I1 1855 aaKnown RBP8.79□□□□□ -1
VPS52-221ENST00000495755 TRIM75PA6NK02 468 aa8.78□□□□□ -1
VPS52-221ENST00000495755 GNRH1P01148 92 aa8.78□□□□□ -1
VPS52-221ENST00000495755 CYP2C8P10632 490 aa8.78□□□□□ -1
VPS52-221ENST00000495755 BCRP11274 1271 aa8.78□□□□□ -1
VPS52-221ENST00000495755 CTGFP29279 349 aa8.78□□□□□ -1
VPS52-221ENST00000495755 JAG1P78504 1218 aa8.78□□□□□ -1
VPS52-221ENST00000495755 KIF22Q14807 665 aa8.78□□□□□ -1
VPS52-221ENST00000495755 TTF1Q15361 905 aaPredicted RBP8.78□□□□□ -1
VPS52-221ENST00000495755 CERS3Q8IU89 383 aa8.78□□□□□ -1
VPS52-221ENST00000495755 PARK7Q99497 189 aaKnown RBP8.78□□□□□ -1
VPS52-221ENST00000495755 TBC1D2Q9BYX2 928 aa8.78□□□□□ -1
VPS52-221ENST00000495755 DNAJC18Q9H819 358 aa8.78□□□□□ -1
VPS52-221ENST00000495755 SAP30BPQ9UHR5 308 aaKnown RBP8.78□□□□□ -1
VPS52-221ENST00000495755 PTCH2Q9Y6C5 1203 aa8.78□□□□□ -1
VPS52-221ENST00000495755 PHIPQ8WWQ0 1821 aa8.77□□□□□ -1
VPS52-221ENST00000495755 DOCK1Q14185 1865 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 TCRBV5S4A2TA0A5A2 114 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 USP17L5A8MUK1 530 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 GOLIM4O00461 696 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 PDE6AP16499 860 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 ATP5JP18859 108 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 PSMC4P43686 418 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 PRMT2P55345 433 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 SPP2Q13103 211 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 SLC9C2Q5TAH2 1124 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 GADL1Q6ZQY3 521 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 PROCA1Q8NCQ7 364 aaPredicted RBP8.77□□□□□ -1.01
VPS52-221ENST00000495755 ZNF280CQ8ND82 737 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 TRIM47Q96LD4 638 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 RIOK1Q9BRS2 568 aaKnown RBP8.77□□□□□ -1.01
VPS52-221ENST00000495755 WDR18Q9BV38 432 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 GINM1Q9NU53 330 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 AGTPBP1Q9UPW5 1226 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 SIPA1L1O43166 1804 aa8.77□□□□□ -1.01
VPS52-221ENST00000495755 FOCADQ5VW36 1801 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 MAGEB6P1A0A0J9YX57 407 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 SMARCA5O60264 1052 aaPredicted RBP8.76□□□□□ -1.01
VPS52-221ENST00000495755 HLA-DOAP06340 250 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 ASNSP08243 561 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 USP5P45974 858 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 SHROOM1Q2M3G4 852 aaPredicted RBP8.76□□□□□ -1.01
VPS52-221ENST00000495755 SH3D19Q5HYK7 790 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 TREML2Q5T2D2 321 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 TATDN1Q6P1N9 297 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 CRACR2BQ8N4Y2 399 aaPredicted RBP8.76□□□□□ -1.01
VPS52-221ENST00000495755 EDC3Q96F86 508 aaKnown RBP8.76□□□□□ -1.01
VPS52-221ENST00000495755 ZNF333Q96JL9 665 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 DNAJC2Q99543 621 aaKnown RBP8.76□□□□□ -1.01
VPS52-221ENST00000495755 HAUS7Q99871 368 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 LRRCC1Q9C099 1032 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 BOLA2Q9H3K6 86 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 DCTPP1Q9H773 170 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 SRRDQ9UH36 339 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 CDK5RAP2Q96SN8 1893 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 ZNF532Q9HCE3 1301 aa8.76□□□□□ -1.01
VPS52-221ENST00000495755 POTEFA5A3E0 1075 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 GDF11O95390 407 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 FMNL1O95466 1100 aaPredicted RBP8.75□□□□□ -1.01
VPS52-221ENST00000495755 OSBPP22059 807 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 HMGCS2P54868 508 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 SLC9C1Q4G0N8 1177 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 NBPF11Q86T75 865 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 TTC6Q86TZ1 520 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 TRIM34Q9BYJ4 488 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 BCL11AQ9H165 835 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 EHD4Q9H223 541 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 AS3MTQ9HBK9 375 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 PAG1Q9NWQ8 432 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 SERPINB13Q9UIV8 391 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 ZBTB21Q9ULJ3 1066 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 ZSWIM8A7E2V4 1837 aa8.75□□□□□ -1.01
VPS52-221ENST00000495755 PTPRFP10586 1907 aa8.74□□□□□ -1.01
VPS52-221ENST00000495755 ECM2O94769 699 aaPredicted RBP8.74□□□□□ -1.01
VPS52-221ENST00000495755 HOXD10P28358 340 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms