RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 CACTINQ8WUQ7 758 aaKnown RBP17.72■□□□□ 0.43
CALD1-222ENST00000495522 ESR2Q92731 530 aa17.72■□□□□ 0.43
CALD1-222ENST00000495522 CUTAO60888 179 aa17.71■□□□□ 0.43
CALD1-222ENST00000495522 DEXIO95424 95 aa17.71■□□□□ 0.43
CALD1-222ENST00000495522 CHAF1AQ13111 956 aaPredicted RBP17.71■□□□□ 0.43
CALD1-222ENST00000495522 FAM98CQ17RN3 349 aaKnown RBP17.71■□□□□ 0.43
CALD1-222ENST00000495522 RESP18Q5W5W9 173 aa17.71■□□□□ 0.43
CALD1-222ENST00000495522 SHC4Q6S5L8 630 aa17.71■□□□□ 0.43
CALD1-222ENST00000495522 ZNF654Q8IZM8 581 aa17.71■□□□□ 0.43
CALD1-222ENST00000495522 RIOK1Q9BRS2 568 aaKnown RBP17.71■□□□□ 0.43
CALD1-222ENST00000495522 CACNA1SQ13698 1873 aa17.71■□□□□ 0.43
CALD1-222ENST00000495522 GUCY1A2P33402 732 aa17.7■□□□□ 0.42
CALD1-222ENST00000495522 BICDL1Q6ZP65 573 aa17.7■□□□□ 0.42
CALD1-222ENST00000495522 NBPF11Q86T75 865 aa17.7■□□□□ 0.42
CALD1-222ENST00000495522 CRACR2BQ8N4Y2 399 aaPredicted RBP17.7■□□□□ 0.42
CALD1-222ENST00000495522 FANCBQ8NB91 859 aa17.7■□□□□ 0.42
CALD1-222ENST00000495522 TAF1P21675 1872 aa17.7■□□□□ 0.42
CALD1-222ENST00000495522 WTIPA6NIX2 430 aaPredicted RBP17.7■□□□□ 0.42
CALD1-222ENST00000495522 TBC1D9BQ66K14 1250 aa17.7■□□□□ 0.42
CALD1-222ENST00000495522 FAM84BQ96KN1 310 aaPredicted RBP17.7■□□□□ 0.42
CALD1-222ENST00000495522 BRIP1Q9BX63 1249 aa17.7■□□□□ 0.42
CALD1-222ENST00000495522 NYXQ9GZU5 481 aa17.7■□□□□ 0.42
CALD1-222ENST00000495522 FOXP1Q9H334 677 aaPredicted RBP17.7■□□□□ 0.42
CALD1-222ENST00000495522 BIN1O00499 593 aa17.69■□□□□ 0.42
CALD1-222ENST00000495522 SEMA3EO15041 775 aa17.69■□□□□ 0.42
CALD1-222ENST00000495522 GTF2F1P35269 517 aaKnown RBP eCLIP17.69■□□□□ 0.42
CALD1-222ENST00000495522 PPP2R5BQ15173 497 aa17.69■□□□□ 0.42
CALD1-222ENST00000495522 SEC23AQ15436 765 aa17.69■□□□□ 0.42
CALD1-222ENST00000495522 MEX3CQ5U5Q3 659 aaKnown RBP17.69■□□□□ 0.42
CALD1-222ENST00000495522 DIS3L2Q8IYB7 885 aaKnown RBP17.69■□□□□ 0.42
CALD1-222ENST00000495522 NUP133Q8WUM0 1156 aa17.69■□□□□ 0.42
CALD1-222ENST00000495522 CELF1Q92879 486 aaKnown RBP17.69■□□□□ 0.42
CALD1-222ENST00000495522 BTBD18B2RXH4 712 aa17.69■□□□□ 0.42
CALD1-222ENST00000495522 TPM4P67936 248 aa17.69■□□□□ 0.42
CALD1-222ENST00000495522 RBM10P98175 930 aaKnown RBP17.69■□□□□ 0.42
CALD1-222ENST00000495522 LRRC8AQ8IWT6 810 aa17.69■□□□□ 0.42
CALD1-222ENST00000495522 FNBP4Q8N3X1 1017 aaPredicted RBP17.69■□□□□ 0.42
CALD1-222ENST00000495522 BCL2L12Q9HB09 334 aa17.69■□□□□ 0.42
CALD1-222ENST00000495522 FAM13BQ9NYF5 915 aa17.69■□□□□ 0.42
CALD1-222ENST00000495522 TUBE1Q9UJT0 475 aa17.69■□□□□ 0.42
CALD1-222ENST00000495522 TNKSO95271 1327 aa17.68■□□□□ 0.42
CALD1-222ENST00000495522 SMTNL1A8MU46 457 aa17.68■□□□□ 0.42
CALD1-222ENST00000495522 KCNQ4P56696 695 aa17.68■□□□□ 0.42
CALD1-222ENST00000495522 FBXO33Q7Z6M2 555 aa17.68■□□□□ 0.42
CALD1-222ENST00000495522 KRI1Q8N9T8 703 aaKnown RBP17.68■□□□□ 0.42
CALD1-222ENST00000495522 CLIC6Q96NY7 704 aa17.68■□□□□ 0.42
CALD1-222ENST00000495522 PDCL3Q9H2J4 239 aa17.68■□□□□ 0.42
CALD1-222ENST00000495522 NARFQ9UHQ1 456 aa17.68■□□□□ 0.42
CALD1-222ENST00000495522 KCNJ14Q9UNX9 436 aa17.68■□□□□ 0.42
CALD1-222ENST00000495522 DUOX1Q9NRD9 1551 aa17.68■□□□□ 0.42
CALD1-222ENST00000495522 DYNLL1P63167 89 aaKnown RBP17.67■□□□□ 0.42
CALD1-222ENST00000495522 RC3H1Q5TC82 1133 aaKnown RBP17.67■□□□□ 0.42
CALD1-222ENST00000495522 PCP11498 1178 aaKnown RBP17.67■□□□□ 0.42
CALD1-222ENST00000495522 RPS8P62241 208 aaKnown RBP17.67■□□□□ 0.42
CALD1-222ENST00000495522 RILPL1Q5EBL4 403 aa17.67■□□□□ 0.42
CALD1-222ENST00000495522 CCDC82Q8N4S0 544 aa17.67■□□□□ 0.42
CALD1-222ENST00000495522 NLRP3Q96P20 1036 aa17.67■□□□□ 0.42
CALD1-222ENST00000495522 MAP7D2Q96T17 732 aa17.67■□□□□ 0.42
CALD1-222ENST00000495522 PDS5AQ29RF7 1337 aaKnown RBP17.67■□□□□ 0.42
CALD1-222ENST00000495522 VPS72Q15906 364 aa17.66■□□□□ 0.42
CALD1-222ENST00000495522 CMTR1Q8N1G2 835 aaKnown RBP17.66■□□□□ 0.42
CALD1-222ENST00000495522 ZSCAN10Q96SZ4 725 aaPredicted RBP17.66■□□□□ 0.42
CALD1-222ENST00000495522 SETDB2Q96T68 719 aa17.66■□□□□ 0.42
CALD1-222ENST00000495522 RNF26Q9BY78 433 aaPredicted RBP17.66■□□□□ 0.42
CALD1-222ENST00000495522 KCNH3Q9ULD8 1083 aa17.66■□□□□ 0.42
CALD1-222ENST00000495522 IKBKBO14920 756 aa17.66■□□□□ 0.42
CALD1-222ENST00000495522 RPS6KA4O75676 772 aa17.66■□□□□ 0.42
CALD1-222ENST00000495522 TOB1P50616 345 aaPredicted RBP17.66■□□□□ 0.42
CALD1-222ENST00000495522 GSDMDP57764 484 aa17.66■□□□□ 0.42
CALD1-222ENST00000495522 FILIP1Q7Z7B0 1213 aa17.66■□□□□ 0.42
CALD1-222ENST00000495522 NBPF5PQ86XG9 351 aaPredicted RBP17.66■□□□□ 0.42
CALD1-222ENST00000495522 ENAHQ8N8S7 591 aaPredicted RBP17.66■□□□□ 0.42
CALD1-222ENST00000495522 ZNF384Q8TF68 577 aa17.66■□□□□ 0.42
CALD1-222ENST00000495522 ANKRD2Q9GZV1 360 aa17.66■□□□□ 0.42
CALD1-222ENST00000495522 USP21Q9UK80 565 aa17.66■□□□□ 0.42
CALD1-222ENST00000495522 COL24A1Q17RW2 1714 aa17.65■□□□□ 0.42
CALD1-222ENST00000495522 AKAP17AQ02040 695 aaKnown RBP17.65■□□□□ 0.42
CALD1-222ENST00000495522 NCAPHQ15003 741 aa17.65■□□□□ 0.42
CALD1-222ENST00000495522 IMPACTQ9P2X3 320 aa17.65■□□□□ 0.42
CALD1-222ENST00000495522 FGRP09769 529 aa17.64■□□□□ 0.42
CALD1-222ENST00000495522 PNOCQ13519 176 aa17.64■□□□□ 0.42
CALD1-222ENST00000495522 KRBA2Q6ZNG9 492 aa17.64■□□□□ 0.42
CALD1-222ENST00000495522 MTERF4Q7Z6M4 381 aaKnown RBP17.64■□□□□ 0.42
CALD1-222ENST00000495522 CATIPQ7Z7H3 387 aa17.64■□□□□ 0.42
CALD1-222ENST00000495522 IQCA1Q86XH1 822 aa17.64■□□□□ 0.42
CALD1-222ENST00000495522 ELOA2Q8IYF1 753 aaPredicted RBP17.64■□□□□ 0.42
CALD1-222ENST00000495522 CNNM3Q8NE01 707 aa17.64■□□□□ 0.42
CALD1-222ENST00000495522 NSUN4Q96CB9 384 aaKnown RBP17.64■□□□□ 0.42
CALD1-222ENST00000495522 BAZ2AQ9UIF9 1905 aaKnown RBP17.64■□□□□ 0.41
CALD1-222ENST00000495522 CYP2D7A0A087X1C5 515 aa17.64■□□□□ 0.41
CALD1-222ENST00000495522 SMIM22K7EJ46 135 aa17.64■□□□□ 0.41
CALD1-222ENST00000495522 ZPR1O75312 459 aa17.64■□□□□ 0.41
CALD1-222ENST00000495522 XBP1P17861 261 aa17.64■□□□□ 0.41
CALD1-222ENST00000495522 ARID5BQ14865 1188 aa17.64■□□□□ 0.41
CALD1-222ENST00000495522 IFIT1BQ5T764 474 aaKnown RBP17.64■□□□□ 0.41
CALD1-222ENST00000495522 CTR9Q6PD62 1173 aa17.64■□□□□ 0.41
CALD1-222ENST00000495522 SMIM5Q71RC9 77 aa17.64■□□□□ 0.41
CALD1-222ENST00000495522 OSBPL5Q9H0X9 879 aaPredicted RBP17.64■□□□□ 0.41
CALD1-222ENST00000495522 SRP68Q9UHB9 627 aaKnown RBP17.64■□□□□ 0.41
CALD1-222ENST00000495522 CEP131Q9UPN4 1083 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms