RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 GSG1L2A8MUP6 293 aa13.35□□□□□ -0.27
APTX-230ENST00000494649 USP17L12C9JPN9 530 aa13.35□□□□□ -0.27
APTX-230ENST00000494649 USP17L21D6R901 530 aa13.35□□□□□ -0.27
APTX-230ENST00000494649 RRP1BQ14684 758 aaKnown RBP13.35□□□□□ -0.27
APTX-230ENST00000494649 TMED8Q6PL24 325 aaPredicted RBP13.35□□□□□ -0.27
APTX-230ENST00000494649 CERS3Q8IU89 383 aa13.35□□□□□ -0.27
APTX-230ENST00000494649 SLC44A5Q8NCS7 719 aa13.35□□□□□ -0.27
APTX-230ENST00000494649 DYNLL2Q96FJ2 89 aa13.35□□□□□ -0.27
APTX-230ENST00000494649 TRIM34Q9BYJ4 488 aa13.35□□□□□ -0.27
APTX-230ENST00000494649 PI4KBQ9UBF8 816 aa13.35□□□□□ -0.27
APTX-230ENST00000494649 OTOFQ9HC10 1997 aa13.34□□□□□ -0.27
APTX-230ENST00000494649 NAV1Q8NEY1 1877 aa13.34□□□□□ -0.27
APTX-230ENST00000494649 MYH1P12882 1939 aa13.34□□□□□ -0.27
APTX-230ENST00000494649 HLA-DOAP06340 250 aa13.34□□□□□ -0.27
APTX-230ENST00000494649 TDO2P48775 406 aa13.34□□□□□ -0.27
APTX-230ENST00000494649 MAP3K9P80192 1104 aa13.34□□□□□ -0.27
APTX-230ENST00000494649 LDLRAD1Q5T700 205 aa13.34□□□□□ -0.27
APTX-230ENST00000494649 RASAL3Q86YV0 1011 aa13.34□□□□□ -0.27
APTX-230ENST00000494649 ANKRD13AQ8IZ07 590 aa13.34□□□□□ -0.27
APTX-230ENST00000494649 SLC10A4Q96EP9 437 aa13.34□□□□□ -0.27
APTX-230ENST00000494649 OTUD5Q96G74 571 aa13.34□□□□□ -0.27
APTX-230ENST00000494649 DHX36Q9H2U1 1008 aaKnown RBP13.34□□□□□ -0.27
APTX-230ENST00000494649 CSADQ9Y600 493 aa13.34□□□□□ -0.27
APTX-230ENST00000494649 MINDY4BA8MYZ0 360 aa13.33□□□□□ -0.27
APTX-230ENST00000494649 FAM155AB1AL88 458 aaPredicted RBP13.33□□□□□ -0.27
APTX-230ENST00000494649 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.27
APTX-230ENST00000494649 GDF11O95390 407 aa13.33□□□□□ -0.27
APTX-230ENST00000494649 MAP3K11Q16584 847 aa13.33□□□□□ -0.27
APTX-230ENST00000494649 MCMDC2Q4G0Z9 681 aa13.33□□□□□ -0.27
APTX-230ENST00000494649 HOOK2Q96ED9 719 aa13.33□□□□□ -0.27
APTX-230ENST00000494649 SIPA1L1O43166 1804 aa13.33□□□□□ -0.27
APTX-230ENST00000494649 PHF20L1A8MW92 1017 aa13.33□□□□□ -0.28
APTX-230ENST00000494649 FOXP2O15409 715 aa13.33□□□□□ -0.28
APTX-230ENST00000494649 CTR9Q6PD62 1173 aa13.33□□□□□ -0.28
APTX-230ENST00000494649 OPTNQ96CV9 577 aa13.33□□□□□ -0.28
APTX-230ENST00000494649 DDRGK1Q96HY6 314 aa13.33□□□□□ -0.28
APTX-230ENST00000494649 ATP8A2Q9NTI2 1148 aa13.33□□□□□ -0.28
APTX-230ENST00000494649 SNCAIPQ9Y6H5 919 aa13.33□□□□□ -0.28
APTX-230ENST00000494649 GJA5P36382 358 aa13.32□□□□□ -0.28
APTX-230ENST00000494649 IFNL3Q8IZI9 196 aa13.32□□□□□ -0.28
APTX-230ENST00000494649 HELLSQ9NRZ9 838 aa13.32□□□□□ -0.28
APTX-230ENST00000494649 SERPINB13Q9UIV8 391 aa13.32□□□□□ -0.28
APTX-230ENST00000494649 PATL2C9JE40 543 aaKnown RBP13.32□□□□□ -0.28
APTX-230ENST00000494649 SLC10A3P09131 477 aa13.32□□□□□ -0.28
APTX-230ENST00000494649 JAG1P78504 1218 aa13.32□□□□□ -0.28
APTX-230ENST00000494649 TTC6Q86TZ1 520 aa13.32□□□□□ -0.28
APTX-230ENST00000494649 DDX60LQ5H9U9 1706 aaKnown RBP13.31□□□□□ -0.28
APTX-230ENST00000494649 CCDC171Q6TFL3 1326 aa13.31□□□□□ -0.28
APTX-230ENST00000494649 CHMLP26374 656 aa13.31□□□□□ -0.28
APTX-230ENST00000494649 ECE1P42892 770 aa13.31□□□□□ -0.28
APTX-230ENST00000494649 NAPBQ9H115 298 aa13.31□□□□□ -0.28
APTX-230ENST00000494649 COL2A1P02458 1487 aaPredicted RBP13.31□□□□□ -0.28
APTX-230ENST00000494649 GNAT2P19087 354 aa13.3□□□□□ -0.28
APTX-230ENST00000494649 KIF23Q02241 960 aaPredicted RBP13.3□□□□□ -0.28
APTX-230ENST00000494649 CCDC102AQ96A19 550 aa13.3□□□□□ -0.28
APTX-230ENST00000494649 WNK4Q96J92 1243 aa13.3□□□□□ -0.28
APTX-230ENST00000494649 HHIPL1Q96JK4 782 aa13.3□□□□□ -0.28
APTX-230ENST00000494649 ZNF112Q9UJU3 913 aa13.3□□□□□ -0.28
APTX-230ENST00000494649 PRDM1O75626 825 aa13.3□□□□□ -0.28
APTX-230ENST00000494649 HSPD1P10809 573 aaKnown RBP13.3□□□□□ -0.28
APTX-230ENST00000494649 C12orf60Q5U649 245 aa13.3□□□□□ -0.28
APTX-230ENST00000494649 SPRYD7Q5W111 196 aa13.3□□□□□ -0.28
APTX-230ENST00000494649 FOXP4Q8IVH2 680 aaPredicted RBP13.3□□□□□ -0.28
APTX-230ENST00000494649 AMOTL1Q8IY63 956 aa13.3□□□□□ -0.28
APTX-230ENST00000494649 NACAP1Q9BZK3 213 aa13.3□□□□□ -0.28
APTX-230ENST00000494649 INCENPQ9NQS7 918 aa13.3□□□□□ -0.28
APTX-230ENST00000494649 HERC5Q9UII4 1024 aaKnown RBP13.3□□□□□ -0.28
APTX-230ENST00000494649 MPHOSPH10O00566 681 aaKnown RBP13.29□□□□□ -0.28
APTX-230ENST00000494649 IRF6O14896 467 aa13.29□□□□□ -0.28
APTX-230ENST00000494649 TBC1D12O60347 775 aa13.29□□□□□ -0.28
APTX-230ENST00000494649 SHMT1P34896 483 aa13.29□□□□□ -0.28
APTX-230ENST00000494649 HAND2P61296 217 aa13.29□□□□□ -0.28
APTX-230ENST00000494649 MAP3K10Q02779 954 aa13.29□□□□□ -0.28
APTX-230ENST00000494649 CTDSPL2Q05D32 466 aa13.29□□□□□ -0.28
APTX-230ENST00000494649 BMP2KLQ5H9B9 411 aa13.29□□□□□ -0.28
APTX-230ENST00000494649 SCYL3Q8IZE3 742 aa13.29□□□□□ -0.28
APTX-230ENST00000494649 PICK1Q9NRD5 415 aa13.29□□□□□ -0.28
APTX-230ENST00000494649 ARPP21Q9UBL0 812 aaPredicted RBP13.29□□□□□ -0.28
APTX-230ENST00000494649 TSKSQ9UJT2 592 aa13.29□□□□□ -0.28
APTX-230ENST00000494649 GTF3C3Q9Y5Q9 886 aa13.29□□□□□ -0.28
APTX-230ENST00000494649 ZHX2Q9Y6X8 837 aa13.29□□□□□ -0.28
APTX-230ENST00000494649 TRIM75PA6NK02 468 aa13.28□□□□□ -0.28
APTX-230ENST00000494649 HIP1O00291 1037 aa13.28□□□□□ -0.28
APTX-230ENST00000494649 CAP2P40123 477 aa13.28□□□□□ -0.28
APTX-230ENST00000494649 NOGQ13253 232 aa13.28□□□□□ -0.28
APTX-230ENST00000494649 DGKZQ13574 1117 aa13.28□□□□□ -0.28
APTX-230ENST00000494649 CTNND1O60716 968 aaKnown RBP13.28□□□□□ -0.28
APTX-230ENST00000494649 GH2P01242 217 aa13.28□□□□□ -0.28
APTX-230ENST00000494649 FGAP02671 866 aa13.28□□□□□ -0.28
APTX-230ENST00000494649 PTPRAP18433 802 aa13.28□□□□□ -0.28
APTX-230ENST00000494649 GABPAQ06546 454 aa13.28□□□□□ -0.28
APTX-230ENST00000494649 RAB3GAP1Q15042 981 aa13.28□□□□□ -0.28
APTX-230ENST00000494649 CERKLQ49MI3 558 aaPredicted RBP13.28□□□□□ -0.28
APTX-230ENST00000494649 CLEC10AQ8IUN9 316 aa13.28□□□□□ -0.28
APTX-230ENST00000494649 EHD4Q9H223 541 aa13.28□□□□□ -0.28
APTX-230ENST00000494649 SPDYE5A6NIY4 337 aa13.27□□□□□ -0.28
APTX-230ENST00000494649 CDK8P49336 464 aa13.27□□□□□ -0.28
APTX-230ENST00000494649 PPARAQ07869 468 aa13.27□□□□□ -0.28
APTX-230ENST00000494649 METTL16Q86W50 562 aaKnown RBP13.27□□□□□ -0.28
APTX-230ENST00000494649 ERO1BQ86YB8 467 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms