RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 NPDC1Q9NQX5 325 aaPredicted RBP10.7□□□□□ -0.7
ITGB1-217ENST00000494395 SIPA1L1O43166 1804 aa10.7□□□□□ -0.7
ITGB1-217ENST00000494395 ATRNL1Q5VV63 1379 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 SALL3Q9BXA9 1300 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 AK9Q5TCS8 1911 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 WDHD1O75717 1129 aaPredicted RBP10.69□□□□□ -0.7
ITGB1-217ENST00000494395 SLC10A3P09131 477 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 NUDT7P0C024 238 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 ATP5JP18859 108 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 NF2P35240 595 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 ECE1P42892 770 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 TNNI2P48788 182 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 TSR1Q2NL82 804 aaKnown RBP10.69□□□□□ -0.7
ITGB1-217ENST00000494395 ARSIQ5FYB1 569 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 RGMBQ6NW40 437 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 MAMSTRQ6ZN01 415 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 ADGRA1Q86SQ6 560 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 RASAL3Q86YV0 1011 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 FAM151AQ8WW52 585 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 DDX4Q9NQI0 724 aaKnown RBP10.69□□□□□ -0.7
ITGB1-217ENST00000494395 USP40Q9NVE5 1235 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 TMOD2Q9NZR1 351 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 RAI14Q9P0K7 980 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 LRP2BPQ9P2M1 347 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 FZD1Q9UP38 647 aa10.69□□□□□ -0.7
ITGB1-217ENST00000494395 DDX60LQ5H9U9 1706 aaKnown RBP10.69□□□□□ -0.7
ITGB1-217ENST00000494395 COL2A1P02458 1487 aaPredicted RBP10.68□□□□□ -0.7
ITGB1-217ENST00000494395 UBE2Q2LH0YL09 131 aa10.68□□□□□ -0.7
ITGB1-217ENST00000494395 USP2O75604 605 aaPredicted RBP10.68□□□□□ -0.7
ITGB1-217ENST00000494395 LDHCP07864 332 aa10.68□□□□□ -0.7
ITGB1-217ENST00000494395 FOSBP53539 338 aa10.68□□□□□ -0.7
ITGB1-217ENST00000494395 GSTO1P78417 241 aa10.68□□□□□ -0.7
ITGB1-217ENST00000494395 SUPT20HL1Q3ZLR7 823 aa10.68□□□□□ -0.7
ITGB1-217ENST00000494395 EDC3Q96F86 508 aaKnown RBP10.68□□□□□ -0.7
ITGB1-217ENST00000494395 ZIC5Q96T25 663 aa10.68□□□□□ -0.7
ITGB1-217ENST00000494395 HAUS7Q99871 368 aa10.68□□□□□ -0.7
ITGB1-217ENST00000494395 UNCXA6NJT0 531 aa10.67□□□□□ -0.7
ITGB1-217ENST00000494395 AOC2O75106 756 aa10.67□□□□□ -0.7
ITGB1-217ENST00000494395 ENTPD3O75355 529 aa10.67□□□□□ -0.7
ITGB1-217ENST00000494395 MAP4K4O95819 1239 aaPredicted RBP10.67□□□□□ -0.7
ITGB1-217ENST00000494395 IGHDP01880 384 aa10.67□□□□□ -0.7
ITGB1-217ENST00000494395 MAP2K2P36507 400 aa10.67□□□□□ -0.7
ITGB1-217ENST00000494395 PPP4CP60510 307 aa10.67□□□□□ -0.7
ITGB1-217ENST00000494395 PRKG1Q13976 671 aa10.67□□□□□ -0.7
ITGB1-217ENST00000494395 NAA16Q6N069 864 aaPredicted RBP10.67□□□□□ -0.7
ITGB1-217ENST00000494395 TMED8Q6PL24 325 aaPredicted RBP10.67□□□□□ -0.7
ITGB1-217ENST00000494395 SH3BP5LQ7L8J4 393 aa10.67□□□□□ -0.7
ITGB1-217ENST00000494395 ARMC9Q7Z3E5 817 aa10.67□□□□□ -0.7
ITGB1-217ENST00000494395 ZFPM1Q8IX07 1006 aa10.67□□□□□ -0.7
ITGB1-217ENST00000494395 SMC5Q8IY18 1101 aa10.67□□□□□ -0.7
ITGB1-217ENST00000494395 GCC1Q96CN9 775 aa10.67□□□□□ -0.7
ITGB1-217ENST00000494395 BOLA2Q9H3K6 86 aa10.67□□□□□ -0.7
ITGB1-217ENST00000494395 WBP1LQ9NX94 342 aa10.67□□□□□ -0.7
ITGB1-217ENST00000494395 ANGEL1Q9UNK9 670 aaKnown RBP10.67□□□□□ -0.7
ITGB1-217ENST00000494395 TCRBV5S4A2TA0A5A2 114 aa10.66□□□□□ -0.7
ITGB1-217ENST00000494395 IDH1O75874 414 aaKnown RBP10.66□□□□□ -0.7
ITGB1-217ENST00000494395 HSPA1AP0DMV8 641 aaKnown RBP10.66□□□□□ -0.7
ITGB1-217ENST00000494395 HSPA1BP0DMV9 641 aaKnown RBP10.66□□□□□ -0.7
ITGB1-217ENST00000494395 RGS3P49796 1198 aa10.66□□□□□ -0.7
ITGB1-217ENST00000494395 ZNF157P51786 506 aaPredicted RBP10.66□□□□□ -0.7
ITGB1-217ENST00000494395 NOGQ13253 232 aa10.66□□□□□ -0.7
ITGB1-217ENST00000494395 TTF1Q15361 905 aaPredicted RBP10.66□□□□□ -0.7
ITGB1-217ENST00000494395 AMHR2Q16671 573 aa10.66□□□□□ -0.7
ITGB1-217ENST00000494395 GPR153Q6NV75 609 aa10.66□□□□□ -0.7
ITGB1-217ENST00000494395 ZNF454Q8N9F8 522 aa10.66□□□□□ -0.7
ITGB1-217ENST00000494395 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.66□□□□□ -0.7
ITGB1-217ENST00000494395 OTUD7AQ8TE49 926 aaPredicted RBP10.66□□□□□ -0.7
ITGB1-217ENST00000494395 CLMNQ96JQ2 1002 aa10.66□□□□□ -0.7
ITGB1-217ENST00000494395 ZSWIM6Q9HCJ5 1215 aa10.66□□□□□ -0.7
ITGB1-217ENST00000494395 ECHDC1Q9NTX5 307 aa10.66□□□□□ -0.7
ITGB1-217ENST00000494395 MYH1P12882 1939 aa10.66□□□□□ -0.7
ITGB1-217ENST00000494395 DDTLA6NHG4 134 aaPredicted RBP10.65□□□□□ -0.7
ITGB1-217ENST00000494395 GOLIM4O00461 696 aa10.65□□□□□ -0.7
ITGB1-217ENST00000494395 PPP1R12BO60237 982 aaPredicted RBP10.65□□□□□ -0.7
ITGB1-217ENST00000494395 PDE6AP16499 860 aa10.65□□□□□ -0.7
ITGB1-217ENST00000494395 CYP7A1P22680 504 aa10.65□□□□□ -0.7
ITGB1-217ENST00000494395 IRX6P78412 446 aaPredicted RBP10.65□□□□□ -0.7
ITGB1-217ENST00000494395 MAP3K10Q02779 954 aa10.65□□□□□ -0.7
ITGB1-217ENST00000494395 TCP10Q12799 353 aa10.65□□□□□ -0.7
ITGB1-217ENST00000494395 TTLL12Q14166 644 aaPredicted RBP10.65□□□□□ -0.7
ITGB1-217ENST00000494395 TSHZ3Q63HK5 1081 aa10.65□□□□□ -0.7
ITGB1-217ENST00000494395 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.65□□□□□ -0.7
ITGB1-217ENST00000494395 MAGEB6Q8N7X4 407 aa10.65□□□□□ -0.7
ITGB1-217ENST00000494395 IL27Q8NEV9 243 aa10.65□□□□□ -0.7
ITGB1-217ENST00000494395 PI4K2BQ8TCG2 481 aa10.65□□□□□ -0.7
ITGB1-217ENST00000494395 SH3RF3Q8TEJ3 882 aaPredicted RBP10.65□□□□□ -0.7
ITGB1-217ENST00000494395 DNAJC2Q99543 621 aaKnown RBP10.65□□□□□ -0.7
ITGB1-217ENST00000494395 PAG1Q9NWQ8 432 aa10.65□□□□□ -0.7
ITGB1-217ENST00000494395 AATFQ9NY61 560 aaKnown RBP eCLIP10.65□□□□□ -0.7
ITGB1-217ENST00000494395 TTC41PQ6P2S7 1318 aa10.64□□□□□ -0.71
ITGB1-217ENST00000494395 DOCK1Q14185 1865 aa10.64□□□□□ -0.71
ITGB1-217ENST00000494395 NAV1Q8NEY1 1877 aa10.64□□□□□ -0.71
ITGB1-217ENST00000494395 PHIPQ8WWQ0 1821 aa10.64□□□□□ -0.71
ITGB1-217ENST00000494395 ADD2P35612 726 aa10.64□□□□□ -0.71
ITGB1-217ENST00000494395 GJA5P36382 358 aa10.64□□□□□ -0.71
ITGB1-217ENST00000494395 IREB2P48200 963 aaKnown RBP10.64□□□□□ -0.71
ITGB1-217ENST00000494395 DYNLL1P63167 89 aaKnown RBP10.64□□□□□ -0.71
ITGB1-217ENST00000494395 MAP3K12Q12852 859 aa10.64□□□□□ -0.71
ITGB1-217ENST00000494395 GRM1Q13255 1194 aa10.64□□□□□ -0.71
ITGB1-217ENST00000494395 ANKRD13AQ8IZ07 590 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms