RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 GPR75-ASB3A0A0A6YYF3 556 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 CETPP11597 493 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 MAP3K10Q02779 954 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 PPATQ06203 517 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 G3BP1Q13283 466 aaKnown RBP eCLIP9.95□□□□□ -0.828e-6■□□□□ 9
HDAC6-234ENST00000493923 SNAPC2Q13487 334 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 MVPQ14764 893 aaKnown RBP9.95□□□□□ -0.82
HDAC6-234ENST00000493923 SHROOM1Q2M3G4 852 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-234ENST00000493923 TNNI3KQ59H18 835 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 NOL9Q5SY16 702 aaKnown RBP9.95□□□□□ -0.82
HDAC6-234ENST00000493923 OTUD7BQ6GQQ9 843 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 ADGRA1Q86SQ6 560 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 DZIP1Q86YF9 867 aaKnown RBP9.95□□□□□ -0.82
HDAC6-234ENST00000493923 ERO1AQ96HE7 468 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 ZFYVE28Q9HCC9 887 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 PIH1D3Q9NQM4 214 aaKnown RBP9.95□□□□□ -0.82
HDAC6-234ENST00000493923 CPA4Q9UI42 421 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 ISY1Q9ULR0 285 aaKnown RBP9.95□□□□□ -0.82
HDAC6-234ENST00000493923 HDAC5Q9UQL6 1122 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 AKAP2Q9Y2D5 859 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 NDUFB9Q9Y6M9 179 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 FPGT-TNNI3KV9GXZ4 949 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 DOCK1Q14185 1865 aa9.95□□□□□ -0.82
HDAC6-234ENST00000493923 TLR2O60603 784 aa9.94□□□□□ -0.82
HDAC6-234ENST00000493923 ENTPD3O75355 529 aa9.94□□□□□ -0.82
HDAC6-234ENST00000493923 CLCN6P51797 869 aa9.94□□□□□ -0.82
HDAC6-234ENST00000493923 JAG1P78504 1218 aa9.94□□□□□ -0.82
HDAC6-234ENST00000493923 PDE4CQ08493 712 aa9.94□□□□□ -0.82
HDAC6-234ENST00000493923 C17orf99Q6UX52 265 aa9.94□□□□□ -0.82
HDAC6-234ENST00000493923 ITPRIPQ8IWB1 547 aa9.94□□□□□ -0.82
HDAC6-234ENST00000493923 SH3RF3Q8TEJ3 882 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-234ENST00000493923 CCDC8Q9H0W5 538 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-234ENST00000493923 DBNLQ9UJU6 430 aaKnown RBP9.94□□□□□ -0.82
HDAC6-234ENST00000493923 ATAD5Q96QE3 1844 aa9.93□□□□□ -0.82
HDAC6-234ENST00000493923 RBBP6Q7Z6E9 1792 aaKnown RBP9.93□□□□□ -0.82
HDAC6-234ENST00000493923 PDHXO00330 501 aa9.93□□□□□ -0.82
HDAC6-234ENST00000493923 SURF6O75683 361 aaKnown RBP9.93□□□□□ -0.82
HDAC6-234ENST00000493923 MYCP01106 439 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-234ENST00000493923 CYP2E1P05181 493 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-234ENST00000493923 CYP2C8P10632 490 aa9.93□□□□□ -0.82
HDAC6-234ENST00000493923 PTPRAP18433 802 aa9.93□□□□□ -0.82
HDAC6-234ENST00000493923 EN2P19622 333 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-234ENST00000493923 ZAP70P43403 619 aa9.93□□□□□ -0.82
HDAC6-234ENST00000493923 LACTBP83111 547 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-234ENST00000493923 RBM10P98175 930 aaKnown RBP9.93□□□□□ -0.82
HDAC6-234ENST00000493923 GORABQ5T7V8 394 aa9.93□□□□□ -0.82
HDAC6-234ENST00000493923 CEP85Q6P2H3 762 aa9.93□□□□□ -0.82
HDAC6-234ENST00000493923 ANKRD23Q86SG2 305 aa9.93□□□□□ -0.82
HDAC6-234ENST00000493923 ZSCAN29Q8IWY8 852 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-234ENST00000493923 ZGPATQ8N5A5 531 aaKnown RBP9.93□□□□□ -0.82
HDAC6-234ENST00000493923 ARMC5Q96C12 935 aa9.93□□□□□ -0.82
HDAC6-234ENST00000493923 EAF2Q96CJ1 260 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-234ENST00000493923 TRIM47Q96LD4 638 aa9.93□□□□□ -0.82
HDAC6-234ENST00000493923 RAI14Q9P0K7 980 aa9.93□□□□□ -0.82
HDAC6-234ENST00000493923 MGAMO43451 1857 aa9.92□□□□□ -0.82
HDAC6-234ENST00000493923 FOCADQ5VW36 1801 aa9.92□□□□□ -0.82
HDAC6-234ENST00000493923 DYNLL1P63167 89 aaKnown RBP9.92□□□□□ -0.82
HDAC6-234ENST00000493923 SPTY2D1Q68D10 685 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-234ENST00000493923 MTERF4Q7Z6M4 381 aaKnown RBP9.92□□□□□ -0.82
HDAC6-234ENST00000493923 SCYL3Q8IZE3 742 aa9.92□□□□□ -0.82
HDAC6-234ENST00000493923 SH3TC2Q8TF17 1288 aa9.92□□□□□ -0.82
HDAC6-234ENST00000493923 HOOK2Q96ED9 719 aa9.92□□□□□ -0.82
HDAC6-234ENST00000493923 ZNF333Q96JL9 665 aa9.92□□□□□ -0.82
HDAC6-234ENST00000493923 GPR108Q9NPR9 543 aa9.92□□□□□ -0.82
HDAC6-234ENST00000493923 EXOC6BQ9Y2D4 811 aa9.92□□□□□ -0.82
HDAC6-234ENST00000493923 AFG3L2Q9Y4W6 797 aa9.92□□□□□ -0.82
HDAC6-234ENST00000493923 ZHX2Q9Y6X8 837 aa9.92□□□□□ -0.82
HDAC6-234ENST00000493923 MAST2Q6P0Q8 1798 aa9.92□□□□□ -0.82
HDAC6-234ENST00000493923 A0A0G2JLL6 359 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-234ENST00000493923 UQCRFS1P1P0C7P4 283 aa9.91□□□□□ -0.82
HDAC6-234ENST00000493923 BCRP11274 1271 aa9.91□□□□□ -0.82
HDAC6-234ENST00000493923 TERF1P54274 439 aa9.91□□□□□ -0.82
HDAC6-234ENST00000493923 OS9Q13438 667 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-234ENST00000493923 TTC39AQ5SRH9 613 aa9.91□□□□□ -0.82
HDAC6-234ENST00000493923 TREML2Q5T2D2 321 aa9.91□□□□□ -0.82
HDAC6-234ENST00000493923 PRRT2Q7Z6L0 340 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-234ENST00000493923 SIRT2Q8IXJ6 389 aa9.91□□□□□ -0.82
HDAC6-234ENST00000493923 FTSJ3Q8IY81 847 aaKnown RBP9.91□□□□□ -0.82
HDAC6-234ENST00000493923 TEX11Q8IYF3 940 aa9.91□□□□□ -0.82
HDAC6-234ENST00000493923 OSBPL5Q9H0X9 879 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-234ENST00000493923 ANTXR1Q9H6X2 564 aa9.91□□□□□ -0.82
HDAC6-234ENST00000493923 DNAJC18Q9H819 358 aa9.91□□□□□ -0.82
HDAC6-234ENST00000493923 AATFQ9NY61 560 aaKnown RBP eCLIP9.91□□□□□ -0.82
HDAC6-234ENST00000493923 TRIM75PA6NK02 468 aa9.9□□□□□ -0.82
HDAC6-234ENST00000493923 CXCL11O14625 94 aa9.9□□□□□ -0.82
HDAC6-234ENST00000493923 OSBPP22059 807 aa9.9□□□□□ -0.82
HDAC6-234ENST00000493923 PSMC4P43686 418 aa9.9□□□□□ -0.82
HDAC6-234ENST00000493923 MTFR1Q15390 333 aa9.9□□□□□ -0.82
HDAC6-234ENST00000493923 SLC4A8Q2Y0W8 1093 aa9.9□□□□□ -0.82
HDAC6-234ENST00000493923 GADL1Q6ZQY3 521 aa9.9□□□□□ -0.82
HDAC6-234ENST00000493923 MAPKAPK5Q8IW41 473 aa9.9□□□□□ -0.82
HDAC6-234ENST00000493923 ZCCHC17Q9NP64 241 aaKnown RBP9.9□□□□□ -0.82
HDAC6-234ENST00000493923 RRAGDQ9NQL2 400 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-234ENST00000493923 LRP2BPQ9P2M1 347 aa9.9□□□□□ -0.82
HDAC6-234ENST00000493923 GABRQQ9UN88 632 aa9.9□□□□□ -0.82
HDAC6-234ENST00000493923 TRIOBPQ9H2D6 2365 aa9.9□□□□□ -0.82
HDAC6-234ENST00000493923 LOC285556D6RIA3 1793 aa9.89□□□□□ -0.83
HDAC6-234ENST00000493923 TBC1D12O60347 775 aa9.89□□□□□ -0.83
HDAC6-234ENST00000493923 PEX10O60683 326 aa9.89□□□□□ -0.83
HDAC6-234ENST00000493923 CTNND1O60716 968 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms