RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 CHAF1AQ13111 956 aaPredicted RBP15.96■□□□□ 0.15
VCP-207ENST00000493886 TXNRD3Q86VQ6 643 aa15.96■□□□□ 0.15
VCP-207ENST00000493886 BRIP1Q9BX63 1249 aa15.96■□□□□ 0.15
VCP-207ENST00000493886 GOLPH3LQ9H4A5 285 aa15.96■□□□□ 0.15
VCP-207ENST00000493886 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.96■□□□□ 0.15
VCP-207ENST00000493886 CCDC73Q6ZRK6 1079 aa15.96■□□□□ 0.15
VCP-207ENST00000493886 LINC00301Q8NCQ3 95 aa15.96■□□□□ 0.15
VCP-207ENST00000493886 DNAJC25Q9H1X3 360 aa15.96■□□□□ 0.15
VCP-207ENST00000493886 POLR3EQ9NVU0 708 aa15.96■□□□□ 0.15
VCP-207ENST00000493886 CLIC4Q9Y696 253 aa15.96■□□□□ 0.15
VCP-207ENST00000493886 NID2Q14112 1375 aa15.96■□□□□ 0.15
VCP-207ENST00000493886 LRMPQ12912 555 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 GRAPQ13588 217 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 KRT40Q6A162 431 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 TMTC2Q8N394 836 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 MYRIPQ8NFW9 859 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 GRAPLQ8TC17 118 aaPredicted RBP15.95■□□□□ 0.14
VCP-207ENST00000493886 CBX8Q9HC52 389 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 PCDHA7Q9UN72 937 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 IRS2Q9Y4H2 1338 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 SMIM22K7EJ46 135 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 YEATS4O95619 227 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 STK38Q15208 465 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 ESR2Q92731 530 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 NRBP1Q9UHY1 535 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 STK36Q9NRP7 1315 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 BAZ2AQ9UIF9 1905 aaKnown RBP15.95■□□□□ 0.14
VCP-207ENST00000493886 PRDX5P30044 214 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 SSRP1Q08945 709 aaKnown RBP15.95■□□□□ 0.14
VCP-207ENST00000493886 FSIP1Q8NA03 581 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 FBXW7Q969H0 707 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 UBAC1Q9BSL1 405 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 SLC26A6Q9BXS9 759 aa15.95■□□□□ 0.14
VCP-207ENST00000493886 IFNAR1P17181 557 aa15.94■□□□□ 0.14
VCP-207ENST00000493886 SNW1Q13573 536 aaKnown RBP15.94■□□□□ 0.14
VCP-207ENST00000493886 RTN1Q16799 776 aa15.94■□□□□ 0.14
VCP-207ENST00000493886 ADALQ6DHV7 355 aa15.94■□□□□ 0.14
VCP-207ENST00000493886 KCNG4Q8TDN1 519 aa15.94■□□□□ 0.14
VCP-207ENST00000493886 ANKIB1Q9P2G1 1089 aa15.94■□□□□ 0.14
VCP-207ENST00000493886 ECM29Q5VYK3 1845 aa15.94■□□□□ 0.14
VCP-207ENST00000493886 CYP2D7A0A087X1C5 515 aa15.94■□□□□ 0.14
VCP-207ENST00000493886 FAM160A1Q05DH4 1040 aa15.94■□□□□ 0.14
VCP-207ENST00000493886 SF3A1Q15459 793 aaKnown RBP15.94■□□□□ 0.14
VCP-207ENST00000493886 PRR5LQ6MZQ0 368 aa15.94■□□□□ 0.14
VCP-207ENST00000493886 ENGASEQ8NFI3 743 aa15.94■□□□□ 0.14
VCP-207ENST00000493886 TRIM5Q9C035 493 aa15.94■□□□□ 0.14
VCP-207ENST00000493886 QTRT2Q9H974 415 aaKnown RBP15.94■□□□□ 0.14
VCP-207ENST00000493886 FMNL1O95466 1100 aaPredicted RBP15.93■□□□□ 0.14
VCP-207ENST00000493886 AATFQ9NY61 560 aaKnown RBP eCLIP15.93■□□□□ 0.14
VCP-207ENST00000493886 UBR3Q6ZT12 1888 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 A0A1W2PQ27 194 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 A0A1W2PQ64 194 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 A0A1W2PQD8 194 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 SPTLC2O15270 562 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 CTAGE5O15320 804 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 RCAN1P53805 252 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 FAM193AP78312 1265 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 TRIM29Q14134 588 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 ANO1Q5XXA6 986 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 CTR9Q6PD62 1173 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 CCDC186Q7Z3E2 898 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 SLC51AQ86UW1 340 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 ZNF654Q8IZM8 581 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 KIAA1524Q8TCG1 905 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 MRPS27Q92552 414 aaKnown RBP15.93■□□□□ 0.14
VCP-207ENST00000493886 ERCC4Q92889 916 aaPredicted RBP15.93■□□□□ 0.14
VCP-207ENST00000493886 JAG2Q9Y219 1238 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 LEMD3Q9Y2U8 911 aa15.93■□□□□ 0.14
VCP-207ENST00000493886 UBE2Q2LH0YL09 131 aa15.92■□□□□ 0.14
VCP-207ENST00000493886 KINO60870 393 aaKnown RBP15.92■□□□□ 0.14
VCP-207ENST00000493886 SEC23AQ15436 765 aa15.92■□□□□ 0.14
VCP-207ENST00000493886 TNKSO95271 1327 aa15.92■□□□□ 0.14
VCP-207ENST00000493886 DUOX1Q9NRD9 1551 aa15.92■□□□□ 0.14
VCP-207ENST00000493886 GYS1P13807 737 aa15.92■□□□□ 0.14
VCP-207ENST00000493886 DMTNQ08495 405 aa15.92■□□□□ 0.14
VCP-207ENST00000493886 WASF1Q92558 559 aa15.92■□□□□ 0.14
VCP-207ENST00000493886 CRNKL1Q9BZJ0 848 aaKnown RBP15.92■□□□□ 0.14
VCP-207ENST00000493886 MYH2Q9UKX2 1941 aa15.92■□□□□ 0.14
VCP-207ENST00000493886 CCDC196A0A1B0GTZ2 297 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 USP17L12C9JPN9 530 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 USP17L21D6R901 530 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 GNL2Q13823 731 aaKnown RBP15.91■□□□□ 0.14
VCP-207ENST00000493886 NUP133Q8WUM0 1156 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 CCDC88AQ3V6T2 1871 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 FGRP09769 529 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 PCP11498 1178 aaKnown RBP15.91■□□□□ 0.14
VCP-207ENST00000493886 ZNF165P49910 485 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 SPTY2D1Q68D10 685 aaPredicted RBP15.91■□□□□ 0.14
VCP-207ENST00000493886 FAM43BQ6ZT52 329 aaPredicted RBP15.91■□□□□ 0.14
VCP-207ENST00000493886 TRIM22Q8IYM9 498 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 FANCBQ8NB91 859 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 RPGRQ92834 1020 aaKnown RBP15.91■□□□□ 0.14
VCP-207ENST00000493886 SPTLC3Q9NUV7 552 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 XDHP47989 1333 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 MAST2Q6P0Q8 1798 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 GOLGA6L6A8MZA4 724 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 SLC27A3Q5K4L6 730 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 ZNF710Q8N1W2 664 aa15.91■□□□□ 0.14
VCP-207ENST00000493886 DCP1AQ9NPI6 582 aaPredicted RBP15.91■□□□□ 0.14
VCP-207ENST00000493886 PRDM1O75626 825 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms