RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 TTC6Q86TZ1 520 aa21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 CRACR2BQ8N4Y2 399 aaPredicted RBP21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 HOOK2Q96ED9 719 aa21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 DYNLL2Q96FJ2 89 aa21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 WRNIP1Q96S55 665 aa21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 NAPBQ9H115 298 aa21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 DDX60LQ5H9U9 1706 aaKnown RBP21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 CEP350Q5VT06 3117 aa21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 MFAP1P55081 439 aaKnown RBP21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 C12orf60Q5U649 245 aa21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 ZKSCAN4Q969J2 545 aaPredicted RBP21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 KLRG1Q96E93 195 aa21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 CLMNQ96JQ2 1002 aa21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 ESYT1Q9BSJ8 1104 aa21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 ZNF341Q9BYN7 854 aa21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 TLL2Q9Y6L7 1015 aa21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 INPP5BP32019 993 aa21.36■■□□□ 1.01
PDLIM7-208ENST00000493815 IREB2P48200 963 aaKnown RBP21.36■■□□□ 1.01
PDLIM7-208ENST00000493815 FKBP1BP68106 108 aa21.36■■□□□ 1.01
PDLIM7-208ENST00000493815 SLC44A5Q8NCS7 719 aa21.36■■□□□ 1.01
PDLIM7-208ENST00000493815 SERPINB13Q9UIV8 391 aa21.36■■□□□ 1.01
PDLIM7-208ENST00000493815 RAD50Q92878 1312 aa21.36■■□□□ 1.01
PDLIM7-208ENST00000493815 PAPPA2Q9BXP8 1791 aa21.36■■□□□ 1.01
PDLIM7-208ENST00000493815 SIPA1L1O43166 1804 aa21.36■■□□□ 1.01
PDLIM7-208ENST00000493815 PHF20L1A8MW92 1017 aa21.35■■□□□ 1.01
PDLIM7-208ENST00000493815 FGAP02671 866 aa21.35■■□□□ 1.01
PDLIM7-208ENST00000493815 MAP3K10Q02779 954 aa21.35■■□□□ 1.01
PDLIM7-208ENST00000493815 RRP1BQ14684 758 aaKnown RBP21.35■■□□□ 1.01
PDLIM7-208ENST00000493815 FOXP4Q8IVH2 680 aaPredicted RBP21.35■■□□□ 1.01
PDLIM7-208ENST00000493815 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.35■■□□□ 1.012e-7■■□□□ 11.8
PDLIM7-208ENST00000493815 TRIM34Q9BYJ4 488 aa21.35■■□□□ 1.01
PDLIM7-208ENST00000493815 ARPP21Q9UBL0 812 aaPredicted RBP21.35■■□□□ 1.01
PDLIM7-208ENST00000493815 TBC1D12O60347 775 aa21.34■■□□□ 1.01
PDLIM7-208ENST00000493815 PTH1RQ03431 593 aa21.34■■□□□ 1.01
PDLIM7-208ENST00000493815 MAP3K11Q16584 847 aa21.34■■□□□ 1.01
PDLIM7-208ENST00000493815 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.34■■□□□ 1.01
PDLIM7-208ENST00000493815 AMOTL1Q8IY63 956 aa21.34■■□□□ 1.01
PDLIM7-208ENST00000493815 HERC5Q9UII4 1024 aaKnown RBP21.34■■□□□ 1.01
PDLIM7-208ENST00000493815 SBK1Q52WX2 424 aa21.34■■□□□ 1.01
PDLIM7-208ENST00000493815 LDLRAD1Q5T700 205 aa21.34■■□□□ 1.01
PDLIM7-208ENST00000493815 CASC1Q6TDU7 716 aa21.34■■□□□ 1.01
PDLIM7-208ENST00000493815 METTL16Q86W50 562 aaKnown RBP21.34■■□□□ 1.01
PDLIM7-208ENST00000493815 EHD4Q9H223 541 aa21.34■■□□□ 1.01
PDLIM7-208ENST00000493815 MAP3K9P80192 1104 aa21.33■■□□□ 1
PDLIM7-208ENST00000493815 GABPAQ06546 454 aa21.33■■□□□ 1
PDLIM7-208ENST00000493815 GRM1Q13255 1194 aa21.33■■□□□ 1
PDLIM7-208ENST00000493815 VGLL4Q14135 290 aa21.33■■□□□ 1
PDLIM7-208ENST00000493815 SHROOM1Q2M3G4 852 aaPredicted RBP21.33■■□□□ 1
PDLIM7-208ENST00000493815 PAXIP1Q6ZW49 1069 aaPredicted RBP21.33■■□□□ 1
PDLIM7-208ENST00000493815 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.33■■□□□ 1
PDLIM7-208ENST00000493815 ZNF112Q9UJU3 913 aa21.33■■□□□ 1
PDLIM7-208ENST00000493815 HAND2P61296 217 aa21.32■■□□□ 1
PDLIM7-208ENST00000493815 ALX1Q15699 326 aa21.32■■□□□ 1
PDLIM7-208ENST00000493815 DSCC1Q9BVC3 393 aa21.32■■□□□ 1
PDLIM7-208ENST00000493815 SHMT1P34896 483 aa21.31■■□□□ 1
PDLIM7-208ENST00000493815 JAG1P78504 1218 aa21.31■■□□□ 1
PDLIM7-208ENST00000493815 CTDSPL2Q05D32 466 aa21.31■■□□□ 1
PDLIM7-208ENST00000493815 PPARAQ07869 468 aa21.31■■□□□ 1
PDLIM7-208ENST00000493815 ANKRD13AQ8IZ07 590 aa21.31■■□□□ 1
PDLIM7-208ENST00000493815 ELP3Q9H9T3 547 aa21.31■■□□□ 1
PDLIM7-208ENST00000493815 GDF11O95390 407 aa21.31■■□□□ 1
PDLIM7-208ENST00000493815 ZNF157P51786 506 aaPredicted RBP21.31■■□□□ 1
PDLIM7-208ENST00000493815 CYP4F22Q6NT55 531 aa21.31■■□□□ 1
PDLIM7-208ENST00000493815 CNKSR2Q8WXI2 1034 aa21.31■■□□□ 1
PDLIM7-208ENST00000493815 ANO2Q9NQ90 1003 aa21.31■■□□□ 1
PDLIM7-208ENST00000493815 INCENPQ9NQS7 918 aa21.31■■□□□ 1
PDLIM7-208ENST00000493815 CSADQ9Y600 493 aa21.31■■□□□ 1
PDLIM7-208ENST00000493815 CDK8P49336 464 aa21.3■■□□□ 1
PDLIM7-208ENST00000493815 MKRN3Q13064 507 aaKnown RBP21.3■■□□□ 1
PDLIM7-208ENST00000493815 DEFB115Q30KQ5 88 aa21.3■■□□□ 1
PDLIM7-208ENST00000493815 RGMBQ6NW40 437 aa21.3■■□□□ 1
PDLIM7-208ENST00000493815 SNCAIPQ9Y6H5 919 aa21.3■■□□□ 1
PDLIM7-208ENST00000493815 OTOFQ9HC10 1997 aa21.29■■□□□ 1
PDLIM7-208ENST00000493815 RASSF10A6NK89 507 aa21.29■■□□□ 1
PDLIM7-208ENST00000493815 PRDM1O75626 825 aa21.29■■□□□ 1
PDLIM7-208ENST00000493815 TATDN1Q6P1N9 297 aa21.29■■□□□ 1
PDLIM7-208ENST00000493815 KIAA1211Q6ZU35 1233 aa21.29■■□□□ 1
PDLIM7-208ENST00000493815 C16orf86Q6ZW13 317 aa21.29■■□□□ 1
PDLIM7-208ENST00000493815 CCDC84Q86UT8 332 aaPredicted RBP21.29■■□□□ 1
PDLIM7-208ENST00000493815 SLC10A4Q96EP9 437 aa21.29■■□□□ 1
PDLIM7-208ENST00000493815 LSG1Q9H089 658 aaKnown RBP21.29■■□□□ 1
PDLIM7-208ENST00000493815 TACC3Q9Y6A5 838 aa21.29■■□□□ 1
PDLIM7-208ENST00000493815 PCNTO95613 3336 aa21.28■■□□□ 1
PDLIM7-208ENST00000493815 CTNND1O60716 968 aaKnown RBP21.28■■□□□ 1
PDLIM7-208ENST00000493815 CAP2P40123 477 aa21.28■■□□□ 1
PDLIM7-208ENST00000493815 CERKLQ49MI3 558 aaPredicted RBP21.28■■□□□ 1
PDLIM7-208ENST00000493815 SCYL3Q8IZE3 742 aa21.28■■□□□ 1
PDLIM7-208ENST00000493815 NBPF3Q9H094 633 aa21.28■■□□□ 1
PDLIM7-208ENST00000493815 ZMYM6O95789 1325 aa21.27■■□□□ 1
PDLIM7-208ENST00000493815 MAP4K1Q92918 833 aa21.27■■□□□ 1
PDLIM7-208ENST00000493815 SWAP70Q9UH65 585 aa21.27■■□□□ 1
PDLIM7-208ENST00000493815 ROBO3Q96MS0 1386 aa21.27■■□□□ 1
PDLIM7-208ENST00000493815 RASAL3Q86YV0 1011 aa21.26■□□□□ 0.99
PDLIM7-208ENST00000493815 TBC1D10CQ8IV04 446 aa21.26■□□□□ 0.99
PDLIM7-208ENST00000493815 OPTNQ96CV9 577 aa21.26■□□□□ 0.99
PDLIM7-208ENST00000493815 OTUD5Q96G74 571 aa21.26■□□□□ 0.99
PDLIM7-208ENST00000493815 CAPNS2Q96L46 248 aa21.26■□□□□ 0.99
PDLIM7-208ENST00000493815 MKNK2Q9HBH9 465 aa21.26■□□□□ 0.99
PDLIM7-208ENST00000493815 PICK1Q9NRD5 415 aa21.26■□□□□ 0.99
PDLIM7-208ENST00000493815 RBM8AQ9Y5S9 174 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms