RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 RSRP1Q9BUV0 290 aa6.53□□□□□ -1.36
CD46-217ENST00000493796 F6X3S4 739 aa6.52□□□□□ -1.37
CD46-217ENST00000493796 GFRA2O00451 464 aa6.52□□□□□ -1.37
CD46-217ENST00000493796 MSMPQ1L6U9 139 aa6.52□□□□□ -1.37
CD46-217ENST00000493796 CYP27C1Q4G0S4 372 aa6.52□□□□□ -1.37
CD46-217ENST00000493796 CDC37L1Q7L3B6 337 aa6.52□□□□□ -1.37
CD46-217ENST00000493796 KCT2Q8NC54 265 aa6.52□□□□□ -1.37
CD46-217ENST00000493796 ZNF507Q8TCN5 953 aa6.52□□□□□ -1.37
CD46-217ENST00000493796 DUSP23Q9BVJ7 150 aa6.52□□□□□ -1.37
CD46-217ENST00000493796 WNT10AQ9GZT5 417 aa6.52□□□□□ -1.37
CD46-217ENST00000493796 RBM47A0AV96 593 aaKnown RBP6.51□□□□□ -1.37
CD46-217ENST00000493796 LEFTY1O75610 366 aa6.51□□□□□ -1.37
CD46-217ENST00000493796 LMNB2Q03252 620 aa6.51□□□□□ -1.37
CD46-217ENST00000493796 PWP1Q13610 501 aa6.51□□□□□ -1.37
CD46-217ENST00000493796 TSNAXIP1Q2TAA8 658 aa6.51□□□□□ -1.37
CD46-217ENST00000493796 NBPF11Q86T75 865 aa6.51□□□□□ -1.37
CD46-217ENST00000493796 CCDC84Q86UT8 332 aaPredicted RBP6.51□□□□□ -1.37
CD46-217ENST00000493796 RELL1Q8IUW5 271 aa6.51□□□□□ -1.37
CD46-217ENST00000493796 JARID2Q92833 1246 aaPredicted RBP6.51□□□□□ -1.37
CD46-217ENST00000493796 RHOVQ96L33 236 aa6.51□□□□□ -1.37
CD46-217ENST00000493796 TMEM74Q96NL1 305 aa6.51□□□□□ -1.37
CD46-217ENST00000493796 LRRC4CQ9HCJ2 640 aa6.51□□□□□ -1.37
CD46-217ENST00000493796 TACC3Q9Y6A5 838 aa6.51□□□□□ -1.37
CD46-217ENST00000493796 PF4P02776 101 aa6.5□□□□□ -1.37
CD46-217ENST00000493796 GBP2P32456 591 aaPredicted RBP6.5□□□□□ -1.37
CD46-217ENST00000493796 RPL6Q02878 288 aaKnown RBP6.5□□□□□ -1.37
CD46-217ENST00000493796 CAMK2GQ13555 558 aaPredicted RBP6.5□□□□□ -1.37
CD46-217ENST00000493796 ERMP1Q7Z2K6 904 aa6.5□□□□□ -1.37
CD46-217ENST00000493796 TOP6BLQ8N6T0 577 aa6.5□□□□□ -1.37
CD46-217ENST00000493796 FBRSQ9HAH7 460 aa6.5□□□□□ -1.37
CD46-217ENST00000493796 ZC3H7BQ9UGR2 993 aaKnown RBP6.5□□□□□ -1.37
CD46-217ENST00000493796 GRK4P32298 578 aa6.49□□□□□ -1.37
CD46-217ENST00000493796 CAP2P40123 477 aa6.49□□□□□ -1.37
CD46-217ENST00000493796 ETF1P62495 437 aaKnown RBP6.49□□□□□ -1.37
CD46-217ENST00000493796 SLBPQ14493 270 aaKnown RBP eCLIP6.49□□□□□ -1.37
CD46-217ENST00000493796 LDLRAD1Q5T700 205 aa6.49□□□□□ -1.37
CD46-217ENST00000493796 BNC2Q6ZN30 1099 aaPredicted RBP6.49□□□□□ -1.37
CD46-217ENST00000493796 ARMCX6Q7L4S7 300 aa6.49□□□□□ -1.37
CD46-217ENST00000493796 PRDM10Q9NQV6 1147 aa6.49□□□□□ -1.37
CD46-217ENST00000493796 FAM221AA4D161 298 aa6.48□□□□□ -1.37
CD46-217ENST00000493796 ADAMTS4O75173 837 aa6.48□□□□□ -1.37
CD46-217ENST00000493796 CILPO75339 1184 aa6.48□□□□□ -1.37
CD46-217ENST00000493796 LRIG2O94898 1065 aa6.48□□□□□ -1.37
CD46-217ENST00000493796 F13A1P00488 732 aa6.48□□□□□ -1.37
CD46-217ENST00000493796 PRNPP04156 253 aa6.48□□□□□ -1.37
CD46-217ENST00000493796 NKG7Q16617 165 aa6.48□□□□□ -1.37
CD46-217ENST00000493796 DIEXFQ68CQ4 756 aaKnown RBP6.48□□□□□ -1.37
CD46-217ENST00000493796 HID1Q8IV36 788 aa6.48□□□□□ -1.37
CD46-217ENST00000493796 GATAD2BQ8WXI9 593 aa6.48□□□□□ -1.37
CD46-217ENST00000493796 COPRSQ9NQ92 184 aa6.48□□□□□ -1.37
CD46-217ENST00000493796 KBTBD4Q9NVX7 518 aa6.48□□□□□ -1.37
CD46-217ENST00000493796 MINDY4BA8MYZ0 360 aa6.47□□□□□ -1.37
CD46-217ENST00000493796 GARTP22102 1010 aa6.47□□□□□ -1.37
CD46-217ENST00000493796 FAM160A1Q05DH4 1040 aa6.47□□□□□ -1.37
CD46-217ENST00000493796 FAM214BQ7L5A3 538 aa6.47□□□□□ -1.37
CD46-217ENST00000493796 HS2ST1Q7LGA3 356 aa6.47□□□□□ -1.37
CD46-217ENST00000493796 FOXQ1Q9C009 403 aa6.47□□□□□ -1.37
CD46-217ENST00000493796 BSDC1Q9NW68 430 aaPredicted RBP6.47□□□□□ -1.37
CD46-217ENST00000493796 U3KQE9 123 aa6.47□□□□□ -1.37
CD46-217ENST00000493796 BPNT1O95861 308 aa6.46□□□□□ -1.38
CD46-217ENST00000493796 WNT11O96014 354 aa6.46□□□□□ -1.38
CD46-217ENST00000493796 PGRP06401 933 aa6.46□□□□□ -1.38
CD46-217ENST00000493796 PDE4BQ07343 736 aa6.46□□□□□ -1.38
CD46-217ENST00000493796 SNAP47Q5SQN1 464 aa6.46□□□□□ -1.38
CD46-217ENST00000493796 FAM181AQ8N9Y4 354 aa6.46□□□□□ -1.38
CD46-217ENST00000493796 GOLM1Q8NBJ4 401 aa6.46□□□□□ -1.38
CD46-217ENST00000493796 TMEM87AQ8NBN3 555 aa6.46□□□□□ -1.38
CD46-217ENST00000493796 HEXIM2Q96MH2 286 aaKnown RBP6.46□□□□□ -1.38
CD46-217ENST00000493796 MKNK2Q9HBH9 465 aa6.46□□□□□ -1.38
CD46-217ENST00000493796 CCDC39Q9UFE4 941 aa6.46□□□□□ -1.38
CD46-217ENST00000493796 GGT7Q9UJ14 662 aa6.46□□□□□ -1.38
CD46-217ENST00000493796 EOMESO95936 686 aa6.45□□□□□ -1.38
CD46-217ENST00000493796 CST3P01034 146 aaPredicted RBP6.45□□□□□ -1.38
CD46-217ENST00000493796 OXCT1P55809 520 aa6.45□□□□□ -1.38
CD46-217ENST00000493796 VSIG10LQ86VR7 867 aa6.45□□□□□ -1.38
CD46-217ENST00000493796 MRPL41Q8IXM3 137 aaKnown RBP6.45□□□□□ -1.38
CD46-217ENST00000493796 MFSD2AQ8NA29 543 aa6.45□□□□□ -1.38
CD46-217ENST00000493796 BACH2Q9BYV9 841 aa6.45□□□□□ -1.38
CD46-217ENST00000493796 KCNQ5Q9NR82 932 aa6.45□□□□□ -1.38
CD46-217ENST00000493796 TJP2Q9UDY2 1190 aa6.45□□□□□ -1.38
CD46-217ENST00000493796 GTF2IRD1Q9UHL9 959 aa6.45□□□□□ -1.38
CD46-217ENST00000493796 ADAM30Q9UKF2 790 aa6.45□□□□□ -1.38
CD46-217ENST00000493796 IGF2BP3O00425 579 aaKnown RBP eCLIP6.44□□□□□ -1.38
CD46-217ENST00000493796 SLITRK5O94991 958 aa6.44□□□□□ -1.38
CD46-217ENST00000493796 EIF4A3P38919 411 aaKnown RBP6.44□□□□□ -1.38
CD46-217ENST00000493796 GP2P55259 537 aaKnown RBP6.44□□□□□ -1.38
CD46-217ENST00000493796 MPP2Q14168 576 aa6.44□□□□□ -1.38
CD46-217ENST00000493796 PRAMEF13Q5VWM6 474 aa6.44□□□□□ -1.38
CD46-217ENST00000493796 FBXL19Q6PCT2 694 aa6.44□□□□□ -1.38
CD46-217ENST00000493796 NFXL1Q6ZNB6 911 aa6.44□□□□□ -1.38
CD46-217ENST00000493796 FAM196AQ6ZSG2 479 aa6.44□□□□□ -1.38
CD46-217ENST00000493796 ARHGAP27Q6ZUM4 889 aa6.44□□□□□ -1.38
CD46-217ENST00000493796 PLD6Q8N2A8 252 aaKnown RBP6.44□□□□□ -1.38
CD46-217ENST00000493796 RGS22Q8NE09 1264 aa6.44□□□□□ -1.38
CD46-217ENST00000493796 NETO1Q8TDF5 533 aa6.44□□□□□ -1.38
CD46-217ENST00000493796 TMEM87BQ96K49 555 aa6.44□□□□□ -1.38
CD46-217ENST00000493796 MIPEPQ99797 713 aa6.44□□□□□ -1.38
CD46-217ENST00000493796 ANGEL1Q9UNK9 670 aaKnown RBP6.44□□□□□ -1.38
CD46-217ENST00000493796 CORINQ9Y5Q5 1042 aa6.44□□□□□ -1.38
CD46-217ENST00000493796 GREM1O60565 184 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms