RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 SH3RF3Q8TEJ3 882 aaPredicted RBP16.5■□□□□ 0.23
IRF1-210ENST00000493208 SMCR8Q8TEV9 937 aaPredicted RBP16.5■□□□□ 0.23
IRF1-210ENST00000493208 TGFBRAP1Q8WUH2 860 aa16.5■□□□□ 0.23
IRF1-210ENST00000493208 TMEM106CQ9BVX2 250 aa16.5■□□□□ 0.23
IRF1-210ENST00000493208 R3HDMLQ9H3Y0 253 aa16.5■□□□□ 0.23
IRF1-210ENST00000493208 IL1RAPL2Q9NP60 686 aa16.5■□□□□ 0.23
IRF1-210ENST00000493208 ZBTB47Q9UFB7 747 aaPredicted RBP16.5■□□□□ 0.23
IRF1-210ENST00000493208 MAST2Q6P0Q8 1798 aa16.5■□□□□ 0.23
IRF1-210ENST00000493208 A0A0G2JLL6 359 aaPredicted RBP16.49■□□□□ 0.23
IRF1-210ENST00000493208 APBB1O00213 710 aa16.49■□□□□ 0.23
IRF1-210ENST00000493208 GADL1Q6ZQY3 521 aa16.49■□□□□ 0.23
IRF1-210ENST00000493208 PRRT2Q7Z6L0 340 aaPredicted RBP16.49■□□□□ 0.23
IRF1-210ENST00000493208 AMOTL1Q8IY63 956 aa16.49■□□□□ 0.23
IRF1-210ENST00000493208 MAGEB6Q8N7X4 407 aa16.49■□□□□ 0.23
IRF1-210ENST00000493208 PROCA1Q8NCQ7 364 aaPredicted RBP16.49■□□□□ 0.23
IRF1-210ENST00000493208 DDRGK1Q96HY6 314 aa16.49■□□□□ 0.23
IRF1-210ENST00000493208 LRRCC1Q9C099 1032 aa16.49■□□□□ 0.23
IRF1-210ENST00000493208 FLT1P17948 1338 aa16.48■□□□□ 0.23
IRF1-210ENST00000493208 USP17L5A8MUK1 530 aa16.48■□□□□ 0.23
IRF1-210ENST00000493208 LACTBP83111 547 aaPredicted RBP16.48■□□□□ 0.23
IRF1-210ENST00000493208 SLC9C1Q4G0N8 1177 aa16.48■□□□□ 0.23
IRF1-210ENST00000493208 ZSCAN25Q6NSZ9 544 aa16.48■□□□□ 0.23
IRF1-210ENST00000493208 SH3BP5LQ7L8J4 393 aa16.48■□□□□ 0.23
IRF1-210ENST00000493208 ZNF280CQ8ND82 737 aa16.48■□□□□ 0.23
IRF1-210ENST00000493208 TLR7Q9NYK1 1049 aaKnown RBP16.48■□□□□ 0.23
IRF1-210ENST00000493208 TAOK2Q9UL54 1235 aa16.48■□□□□ 0.23
IRF1-210ENST00000493208 AFG3L2Q9Y4W6 797 aa16.48■□□□□ 0.23
IRF1-210ENST00000493208 TRIM75PA6NK02 468 aa16.47■□□□□ 0.23
IRF1-210ENST00000493208 OSBPP22059 807 aa16.47■□□□□ 0.23
IRF1-210ENST00000493208 CAP2P40123 477 aa16.47■□□□□ 0.23
IRF1-210ENST00000493208 FCGRTP55899 365 aa16.47■□□□□ 0.23
IRF1-210ENST00000493208 SOX10P56693 466 aa16.47■□□□□ 0.23
IRF1-210ENST00000493208 LRRFIP1Q32MZ4 808 aaKnown RBP16.47■□□□□ 0.23
IRF1-210ENST00000493208 MAPKAPK5Q8IW41 473 aa16.47■□□□□ 0.23
IRF1-210ENST00000493208 ZNF384Q8TF68 577 aa16.47■□□□□ 0.23
IRF1-210ENST00000493208 DNAJC2Q99543 621 aaKnown RBP16.47■□□□□ 0.23
IRF1-210ENST00000493208 CRNKL1Q9BZJ0 848 aaKnown RBP16.47■□□□□ 0.23
IRF1-210ENST00000493208 PIH1D3Q9NQM4 214 aaKnown RBP16.47■□□□□ 0.23
IRF1-210ENST00000493208 TMOD4Q9NZQ9 345 aa16.47■□□□□ 0.23
IRF1-210ENST00000493208 MAGEB6P1A0A0J9YX57 407 aa16.46■□□□□ 0.23
IRF1-210ENST00000493208 FMNL1O95466 1100 aaPredicted RBP16.46■□□□□ 0.23
IRF1-210ENST00000493208 SLC9C2Q5TAH2 1124 aa16.46■□□□□ 0.23
IRF1-210ENST00000493208 BCL11AQ9H165 835 aa16.46■□□□□ 0.23
IRF1-210ENST00000493208 AGTPBP1Q9UPW5 1226 aa16.46■□□□□ 0.23
IRF1-210ENST00000493208 C17orf99Q6UX52 265 aa16.45■□□□□ 0.22
IRF1-210ENST00000493208 CABP5Q9NP86 173 aa16.45■□□□□ 0.22
IRF1-210ENST00000493208 C19orf81C9J6K1 198 aa16.44■□□□□ 0.22
IRF1-210ENST00000493208 GOLIM4O00461 696 aa16.44■□□□□ 0.22
IRF1-210ENST00000493208 POLR3DP05423 398 aaPredicted RBP16.44■□□□□ 0.22
IRF1-210ENST00000493208 PSMC4P43686 418 aa16.44■□□□□ 0.22
IRF1-210ENST00000493208 GCLCP48506 637 aaPredicted RBP16.44■□□□□ 0.22
IRF1-210ENST00000493208 SPP2Q13103 211 aa16.44■□□□□ 0.22
IRF1-210ENST00000493208 MIGA1Q8NAN2 632 aa16.44■□□□□ 0.22
IRF1-210ENST00000493208 RAET1EQ8TD07 263 aa16.44■□□□□ 0.22
IRF1-210ENST00000493208 ARMC5Q96C12 935 aa16.44■□□□□ 0.22
IRF1-210ENST00000493208 EHD4Q9H223 541 aa16.44■□□□□ 0.22
IRF1-210ENST00000493208 PAG1Q9NWQ8 432 aa16.44■□□□□ 0.22
IRF1-210ENST00000493208 CPA4Q9UI42 421 aa16.44■□□□□ 0.22
IRF1-210ENST00000493208 SERPINB13Q9UIV8 391 aa16.44■□□□□ 0.22
IRF1-210ENST00000493208 ATP5JP18859 108 aa16.43■□□□□ 0.22
IRF1-210ENST00000493208 GTF3C2Q8WUA4 911 aaPredicted RBP16.43■□□□□ 0.22
IRF1-210ENST00000493208 TRIM47Q96LD4 638 aa16.43■□□□□ 0.22
IRF1-210ENST00000493208 WDR18Q9BV38 432 aa16.43■□□□□ 0.22
IRF1-210ENST00000493208 PALD1Q9ULE6 856 aa16.43■□□□□ 0.22
IRF1-210ENST00000493208 DOCK1Q14185 1865 aa16.42■□□□□ 0.22
IRF1-210ENST00000493208 CAPN2P17655 700 aa16.42■□□□□ 0.22
IRF1-210ENST00000493208 USP14P54578 494 aa16.42■□□□□ 0.22
IRF1-210ENST00000493208 UBXN2AP68543 259 aa16.42■□□□□ 0.22
IRF1-210ENST00000493208 IRX3P78415 501 aaPredicted RBP16.42■□□□□ 0.22
IRF1-210ENST00000493208 SLC4A8Q2Y0W8 1093 aa16.42■□□□□ 0.22
IRF1-210ENST00000493208 ADGRA1Q86SQ6 560 aa16.42■□□□□ 0.22
IRF1-210ENST00000493208 METTL16Q86W50 562 aaKnown RBP16.42■□□□□ 0.22
IRF1-210ENST00000493208 COA7Q96BR5 231 aa16.42■□□□□ 0.22
IRF1-210ENST00000493208 SAP30BPQ9UHR5 308 aaKnown RBP16.42■□□□□ 0.22
IRF1-210ENST00000493208 FAM196BA6NMK8 535 aa16.41■□□□□ 0.22
IRF1-210ENST00000493208 USP17L10C9JJH3 530 aa16.41■□□□□ 0.22
IRF1-210ENST00000493208 PDE6AP16499 860 aa16.41■□□□□ 0.22
IRF1-210ENST00000493208 DYNLL1P63167 89 aaKnown RBP16.41■□□□□ 0.22
IRF1-210ENST00000493208 AAMPQ13685 434 aa16.41■□□□□ 0.22
IRF1-210ENST00000493208 GPAT2Q6NUI2 795 aa16.41■□□□□ 0.22
IRF1-210ENST00000493208 CCAR1Q8IX12 1150 aaKnown RBP16.41■□□□□ 0.22
IRF1-210ENST00000493208 SIRT2Q8IXJ6 389 aa16.41■□□□□ 0.22
IRF1-210ENST00000493208 NKX2-3Q8TAU0 364 aa16.41■□□□□ 0.22
IRF1-210ENST00000493208 SRRDQ9UH36 339 aa16.41■□□□□ 0.22
IRF1-210ENST00000493208 MYPNQ86TC9 1320 aa16.41■□□□□ 0.22
IRF1-210ENST00000493208 TNPO2O14787 897 aaKnown RBP16.4■□□□□ 0.22
IRF1-210ENST00000493208 ERC2O15083 957 aa16.4■□□□□ 0.22
IRF1-210ENST00000493208 CYP2C8P10632 490 aa16.4■□□□□ 0.22
IRF1-210ENST00000493208 HMGCS2P54868 508 aa16.4■□□□□ 0.22
IRF1-210ENST00000493208 BACE1P56817 501 aa16.4■□□□□ 0.22
IRF1-210ENST00000493208 SH3D19Q5HYK7 790 aa16.4■□□□□ 0.22
IRF1-210ENST00000493208 FEZ1Q99689 392 aa16.4■□□□□ 0.22
IRF1-210ENST00000493208 HAUS7Q99871 368 aa16.4■□□□□ 0.22
IRF1-210ENST00000493208 BOLA2Q9H3K6 86 aa16.4■□□□□ 0.22
IRF1-210ENST00000493208 ANTXR1Q9H6X2 564 aa16.4■□□□□ 0.22
IRF1-210ENST00000493208 ATP8A2Q9NTI2 1148 aa16.4■□□□□ 0.22
IRF1-210ENST00000493208 ECHDC1Q9NTX5 307 aa16.4■□□□□ 0.22
IRF1-210ENST00000493208 MCM9Q9NXL9 1143 aa16.4■□□□□ 0.22
IRF1-210ENST00000493208 BIN2Q9UBW5 565 aaPredicted RBP16.4■□□□□ 0.22
IRF1-210ENST00000493208 SWAP70Q9UH65 585 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms