RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 GPAT2Q6NUI2 795 aa25.09■■□□□ 1.61
CLTA-208ENST00000493185 GADL1Q6ZQY3 521 aa25.09■■□□□ 1.61
CLTA-208ENST00000493185 ADGRA1Q86SQ6 560 aa25.09■■□□□ 1.61
CLTA-208ENST00000493185 TGFBRAP1Q8WUH2 860 aa25.09■■□□□ 1.61
CLTA-208ENST00000493185 KIF1BPQ96EK5 621 aa25.09■■□□□ 1.61
CLTA-208ENST00000493185 IL1RAPL2Q9NP60 686 aa25.09■■□□□ 1.61
CLTA-208ENST00000493185 ZSWIM8A7E2V4 1837 aa25.09■■□□□ 1.61
CLTA-208ENST00000493185 ADGRA2Q96PE1 1338 aa25.09■■□□□ 1.61
CLTA-208ENST00000493185 TRIM75PA6NK02 468 aa25.08■■□□□ 1.61
CLTA-208ENST00000493185 CYP7A1P22680 504 aa25.08■■□□□ 1.61
CLTA-208ENST00000493185 CLASRPQ8N2M8 674 aaKnown RBP25.08■■□□□ 1.61
CLTA-208ENST00000493185 ARHGAP39Q9C0H5 1083 aa25.08■■□□□ 1.61
CLTA-208ENST00000493185 PTCH2Q9Y6C5 1203 aa25.08■■□□□ 1.61
CLTA-208ENST00000493185 FLT1P17948 1338 aa25.08■■□□□ 1.6
CLTA-208ENST00000493185 APBB1O00213 710 aa25.07■■□□□ 1.6
CLTA-208ENST00000493185 SLC9C1Q4G0N8 1177 aa25.07■■□□□ 1.6
CLTA-208ENST00000493185 NBPF11Q86T75 865 aa25.07■■□□□ 1.6
CLTA-208ENST00000493185 CERS3Q8IU89 383 aa25.07■■□□□ 1.6
CLTA-208ENST00000493185 MAPKAPK5Q8IW41 473 aa25.07■■□□□ 1.6
CLTA-208ENST00000493185 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.07■■□□□ 1.6
CLTA-208ENST00000493185 CENPFP49454 3210 aa25.07■■□□□ 1.6
CLTA-208ENST00000493185 PRMT2P55345 433 aa25.06■■□□□ 1.6
CLTA-208ENST00000493185 MAP3K12Q12852 859 aa25.06■■□□□ 1.6
CLTA-208ENST00000493185 MAGEB6Q8N7X4 407 aa25.06■■□□□ 1.6
CLTA-208ENST00000493185 TRIM34Q9BYJ4 488 aa25.06■■□□□ 1.6
CLTA-208ENST00000493185 TBC1D2Q9BYX2 928 aa25.06■■□□□ 1.6
CLTA-208ENST00000493185 SLC45A1Q9Y2W3 748 aa25.06■■□□□ 1.6
CLTA-208ENST00000493185 KIAA0100Q14667 2235 aaKnown RBP25.05■■□□□ 1.6
CLTA-208ENST00000493185 CYP2C8P10632 490 aa25.05■■□□□ 1.6
CLTA-208ENST00000493185 CAP2P40123 477 aa25.05■■□□□ 1.6
CLTA-208ENST00000493185 TMED8Q6PL24 325 aaPredicted RBP25.05■■□□□ 1.6
CLTA-208ENST00000493185 CCDC84Q86UT8 332 aaPredicted RBP25.05■■□□□ 1.6
CLTA-208ENST00000493185 NDUFB9Q9Y6M9 179 aa25.05■■□□□ 1.6
CLTA-208ENST00000493185 RBBP6Q7Z6E9 1792 aaKnown RBP25.05■■□□□ 1.6
CLTA-208ENST00000493185 SIPA1L1O43166 1804 aa25.05■■□□□ 1.6
CLTA-208ENST00000493185 RAB11FIP3O75154 756 aa25.04■■□□□ 1.6
CLTA-208ENST00000493185 ECM2O94769 699 aaPredicted RBP25.04■■□□□ 1.6
CLTA-208ENST00000493185 IFIT2P09913 472 aaKnown RBP25.04■■□□□ 1.6
CLTA-208ENST00000493185 PSMC4P43686 418 aa25.04■■□□□ 1.6
CLTA-208ENST00000493185 DYNLL1P63167 89 aaKnown RBP25.04■■□□□ 1.6
CLTA-208ENST00000493185 PDE3AQ14432 1141 aa25.04■■□□□ 1.6
CLTA-208ENST00000493185 SIRT2Q8IXJ6 389 aa25.04■■□□□ 1.6
CLTA-208ENST00000493185 CRACR2BQ8N4Y2 399 aaPredicted RBP25.04■■□□□ 1.6
CLTA-208ENST00000493185 ANTXR1Q9H6X2 564 aa25.04■■□□□ 1.6
CLTA-208ENST00000493185 HOXD10P28358 340 aa25.03■■□□□ 1.6
CLTA-208ENST00000493185 TTF1Q15361 905 aaPredicted RBP25.03■■□□□ 1.6
CLTA-208ENST00000493185 FOXP4Q8IVH2 680 aaPredicted RBP25.03■■□□□ 1.6
CLTA-208ENST00000493185 MIGA1Q8NAN2 632 aa25.03■■□□□ 1.6
CLTA-208ENST00000493185 ZNF280CQ8ND82 737 aa25.03■■□□□ 1.6
CLTA-208ENST00000493185 ZNF333Q96JL9 665 aa25.03■■□□□ 1.6
CLTA-208ENST00000493185 PALD1Q9ULE6 856 aa25.03■■□□□ 1.6
CLTA-208ENST00000493185 AGTPBP1Q9UPW5 1226 aa25.03■■□□□ 1.6
CLTA-208ENST00000493185 POTEFA5A3E0 1075 aa25.02■■□□□ 1.6
CLTA-208ENST00000493185 USP17L5A8MUK1 530 aa25.02■■□□□ 1.6
CLTA-208ENST00000493185 FMNL1O95466 1100 aaPredicted RBP25.02■■□□□ 1.6
CLTA-208ENST00000493185 HLA-DOAP06340 250 aa25.02■■□□□ 1.6
CLTA-208ENST00000493185 BCRP11274 1271 aa25.02■■□□□ 1.6
CLTA-208ENST00000493185 SPP2Q13103 211 aa25.02■■□□□ 1.6
CLTA-208ENST00000493185 SMCR8Q8TEV9 937 aaPredicted RBP25.02■■□□□ 1.6
CLTA-208ENST00000493185 TRIM47Q96LD4 638 aa25.02■■□□□ 1.6
CLTA-208ENST00000493185 TMEM106CQ9BVX2 250 aa25.02■■□□□ 1.6
CLTA-208ENST00000493185 BCL11AQ9H165 835 aa25.02■■□□□ 1.6
CLTA-208ENST00000493185 AS3MTQ9HBK9 375 aa25.02■■□□□ 1.6
CLTA-208ENST00000493185 SAP30BPQ9UHR5 308 aaKnown RBP25.02■■□□□ 1.6
CLTA-208ENST00000493185 MYH1P12882 1939 aa25.02■■□□□ 1.6
CLTA-208ENST00000493185 USP5P45974 858 aa25.01■■□□□ 1.59
CLTA-208ENST00000493185 RRP1BQ14684 758 aaKnown RBP25.01■■□□□ 1.59
CLTA-208ENST00000493185 PROCA1Q8NCQ7 364 aaPredicted RBP25.01■■□□□ 1.59
CLTA-208ENST00000493185 SRRDQ9UH36 339 aa25.01■■□□□ 1.59
CLTA-208ENST00000493185 PNMA3Q9UL41 463 aa25.01■■□□□ 1.59
CLTA-208ENST00000493185 MGAMO43451 1857 aa25■■□□□ 1.59
CLTA-208ENST00000493185 ASNSP08243 561 aa25■■□□□ 1.59
CLTA-208ENST00000493185 CTGFP29279 349 aa25■■□□□ 1.59
CLTA-208ENST00000493185 FCGRTP55899 365 aa25■■□□□ 1.59
CLTA-208ENST00000493185 METTL16Q86W50 562 aaKnown RBP25■■□□□ 1.59
CLTA-208ENST00000493185 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25■■□□□ 1.59
CLTA-208ENST00000493185 LOC285556D6RIA3 1793 aa25■■□□□ 1.59
CLTA-208ENST00000493185 OSBPP22059 807 aa24.99■■□□□ 1.59
CLTA-208ENST00000493185 C20orf194Q5TEA3 1177 aa24.99■■□□□ 1.59
CLTA-208ENST00000493185 PABPC4Q13310 644 aaKnown RBP eCLIP24.98■■□□□ 1.591e-9■■■□□ 17.2
CLTA-208ENST00000493185 RAET1EQ8TD07 263 aa24.98■■□□□ 1.59
CLTA-208ENST00000493185 SH3TC2Q8TF17 1288 aa24.98■■□□□ 1.59
CLTA-208ENST00000493185 DNAJC2Q99543 621 aaKnown RBP24.98■■□□□ 1.59
CLTA-208ENST00000493185 DNAJC18Q9H819 358 aa24.98■■□□□ 1.59
CLTA-208ENST00000493185 GINM1Q9NU53 330 aa24.98■■□□□ 1.59
CLTA-208ENST00000493185 MYPNQ86TC9 1320 aa24.97■■□□□ 1.59
CLTA-208ENST00000493185 HMGCS2P54868 508 aa24.97■■□□□ 1.59
CLTA-208ENST00000493185 SLC4A8Q2Y0W8 1093 aa24.97■■□□□ 1.59
CLTA-208ENST00000493185 TREML2Q5T2D2 321 aa24.97■■□□□ 1.59
CLTA-208ENST00000493185 GOLIM4O00461 696 aa24.96■■□□□ 1.59
CLTA-208ENST00000493185 SLC9C2Q5TAH2 1124 aa24.96■■□□□ 1.59
CLTA-208ENST00000493185 WDR18Q9BV38 432 aa24.96■■□□□ 1.59
CLTA-208ENST00000493185 MAGEB6P1A0A0J9YX57 407 aa24.95■■□□□ 1.58
CLTA-208ENST00000493185 MYCP01106 439 aaPredicted RBP24.95■■□□□ 1.58
CLTA-208ENST00000493185 PDE6AP16499 860 aa24.95■■□□□ 1.58
CLTA-208ENST00000493185 SH3D19Q5HYK7 790 aa24.95■■□□□ 1.58
CLTA-208ENST00000493185 GDF11O95390 407 aa24.94■■□□□ 1.58
CLTA-208ENST00000493185 EN2P19622 333 aaPredicted RBP24.94■■□□□ 1.58
CLTA-208ENST00000493185 MTMR2Q13614 643 aa24.94■■□□□ 1.58
CLTA-208ENST00000493185 TTC6Q86TZ1 520 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms