RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 HSPA1AP0DMV8 641 aaKnown RBP15.38■□□□□ 0.05
CLIP2-209ENST00000493166 HSPA1BP0DMV9 641 aaKnown RBP15.38■□□□□ 0.05
CLIP2-209ENST00000493166 SLURP2P0DP57 97 aa15.38■□□□□ 0.05
CLIP2-209ENST00000493166 ZBTB48P10074 688 aaPredicted RBP15.38■□□□□ 0.05
CLIP2-209ENST00000493166 PDE4AP27815 886 aa15.38■□□□□ 0.05
CLIP2-209ENST00000493166 MAP3K10Q02779 954 aa15.38■□□□□ 0.05
CLIP2-209ENST00000493166 CENPQQ7L2Z9 268 aaPredicted RBP15.38■□□□□ 0.05
CLIP2-209ENST00000493166 CRACR2BQ8N4Y2 399 aaPredicted RBP15.38■□□□□ 0.05
CLIP2-209ENST00000493166 OSBP2Q969R2 916 aa15.38■□□□□ 0.05
CLIP2-209ENST00000493166 RILPL2Q969X0 211 aa15.38■□□□□ 0.05
CLIP2-209ENST00000493166 CCDC136Q96JN2 1154 aa15.38■□□□□ 0.05
CLIP2-209ENST00000493166 BEGAINQ9BUH8 593 aa15.38■□□□□ 0.05
CLIP2-209ENST00000493166 SNCAIPQ9Y6H5 919 aa15.38■□□□□ 0.05
CLIP2-209ENST00000493166 PHF20L1A8MW92 1017 aa15.37■□□□□ 0.05
CLIP2-209ENST00000493166 REM2Q8IYK8 340 aaPredicted RBP15.37■□□□□ 0.05
CLIP2-209ENST00000493166 OTUD5Q96G74 571 aa15.37■□□□□ 0.05
CLIP2-209ENST00000493166 DDRGK1Q96HY6 314 aa15.37■□□□□ 0.05
CLIP2-209ENST00000493166 DCP1AQ9NPI6 582 aaPredicted RBP15.37■□□□□ 0.05
CLIP2-209ENST00000493166 ATP8A2Q9NTI2 1148 aa15.37■□□□□ 0.05
CLIP2-209ENST00000493166 WBP1LQ9NX94 342 aa15.37■□□□□ 0.05
CLIP2-209ENST00000493166 SLC4A4Q9Y6R1 1079 aa15.37■□□□□ 0.05
CLIP2-209ENST00000493166 SPDYE5A6NIY4 337 aa15.36■□□□□ 0.05
CLIP2-209ENST00000493166 M0R2C6 588 aa15.36■□□□□ 0.05
CLIP2-209ENST00000493166 PRKAB2O43741 272 aa15.36■□□□□ 0.05
CLIP2-209ENST00000493166 POLR3DP05423 398 aaPredicted RBP15.36■□□□□ 0.05
CLIP2-209ENST00000493166 GJA5P36382 358 aa15.36■□□□□ 0.05
CLIP2-209ENST00000493166 SREBF2Q12772 1141 aa15.36■□□□□ 0.05
CLIP2-209ENST00000493166 NOL9Q5SY16 702 aaKnown RBP15.36■□□□□ 0.05
CLIP2-209ENST00000493166 TTC6Q86TZ1 520 aa15.36■□□□□ 0.05
CLIP2-209ENST00000493166 ERO1BQ86YB8 467 aa15.36■□□□□ 0.05
CLIP2-209ENST00000493166 FOXP4Q8IVH2 680 aaPredicted RBP15.36■□□□□ 0.05
CLIP2-209ENST00000493166 CNKSR2Q8WXI2 1034 aa15.36■□□□□ 0.05
CLIP2-209ENST00000493166 STRBPQ96SI9 672 aaKnown RBP15.36■□□□□ 0.05
CLIP2-209ENST00000493166 MCM9Q9NXL9 1143 aa15.36■□□□□ 0.05
CLIP2-209ENST00000493166 MANSC4A6NHS7 340 aaPredicted RBP15.35■□□□□ 0.05
CLIP2-209ENST00000493166 GPAA1O43292 621 aa15.35■□□□□ 0.05
CLIP2-209ENST00000493166 CTNND1O60716 968 aaKnown RBP15.35■□□□□ 0.05
CLIP2-209ENST00000493166 ZMYM1Q5SVZ6 1142 aa15.35■□□□□ 0.05
CLIP2-209ENST00000493166 SCYL3Q8IZE3 742 aa15.35■□□□□ 0.05
CLIP2-209ENST00000493166 SEC62Q99442 399 aaKnown RBP15.35■□□□□ 0.05
CLIP2-209ENST00000493166 PICK1Q9NRD5 415 aa15.35■□□□□ 0.05
CLIP2-209ENST00000493166 SERPINB13Q9UIV8 391 aa15.35■□□□□ 0.05
CLIP2-209ENST00000493166 GNAT2P19087 354 aa15.34■□□□□ 0.05
CLIP2-209ENST00000493166 PPATQ06203 517 aa15.34■□□□□ 0.05
CLIP2-209ENST00000493166 PPIL2Q13356 520 aa15.34■□□□□ 0.05
CLIP2-209ENST00000493166 TTC22Q5TAA0 569 aa15.34■□□□□ 0.05
CLIP2-209ENST00000493166 METTL16Q86W50 562 aaKnown RBP15.34■□□□□ 0.05
CLIP2-209ENST00000493166 TICAM2Q86XR7 235 aa15.34■□□□□ 0.05
CLIP2-209ENST00000493166 AMOTL1Q8IY63 956 aa15.34■□□□□ 0.05
CLIP2-209ENST00000493166 EHD4Q9H223 541 aa15.34■□□□□ 0.05
CLIP2-209ENST00000493166 DNAJC18Q9H819 358 aa15.34■□□□□ 0.05
CLIP2-209ENST00000493166 CA12O43570 354 aa15.33■□□□□ 0.04
CLIP2-209ENST00000493166 PLCD1P51178 756 aa15.33■□□□□ 0.04
CLIP2-209ENST00000493166 IFFO2Q5TF58 517 aa15.33■□□□□ 0.04
CLIP2-209ENST00000493166 LOC285556D6RIA3 1793 aa15.32■□□□□ 0.04
CLIP2-209ENST00000493166 FOXN1O15353 648 aa15.32■□□□□ 0.04
CLIP2-209ENST00000493166 APPP05067 770 aa15.32■□□□□ 0.04
CLIP2-209ENST00000493166 CYP2D6P10635 497 aa15.32■□□□□ 0.04
CLIP2-209ENST00000493166 CAP2P40123 477 aa15.32■□□□□ 0.04
CLIP2-209ENST00000493166 TM4SF4P48230 202 aa15.32■□□□□ 0.04
CLIP2-209ENST00000493166 GTF2A2P52657 109 aa15.32■□□□□ 0.04
CLIP2-209ENST00000493166 INHBEP58166 350 aa15.32■□□□□ 0.04
CLIP2-209ENST00000493166 HELLSQ9NRZ9 838 aa15.32■□□□□ 0.04
CLIP2-209ENST00000493166 CASP8AP2Q9UKL3 1982 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 A0A0D9SFI3 127 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 GSG1L2A8MUP6 293 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 USP17L12C9JPN9 530 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 USP17L21D6R901 530 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 IRF6O14896 467 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 GSPT1P15170 499 aaKnown RBP15.31■□□□□ 0.04
CLIP2-209ENST00000493166 PTPRAP18433 802 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 SDSP20132 328 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 TDO2P48775 406 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 SNAPC2Q13487 334 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 RRP1BQ14684 758 aaKnown RBP15.31■□□□□ 0.04
CLIP2-209ENST00000493166 ERICH6BQ5W0A0 696 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 GIMAP6Q6P9H5 292 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 CCDC129Q6ZRS4 1044 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 FAM227BQ96M60 508 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 DIAPH3Q9NSV4 1193 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.31■□□□□ 0.04
CLIP2-209ENST00000493166 ARPP21Q9UBL0 812 aaPredicted RBP15.31■□□□□ 0.04
CLIP2-209ENST00000493166 ZHX2Q9Y6X8 837 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 LAMA4Q16363 1823 aa15.31■□□□□ 0.04
CLIP2-209ENST00000493166 CYP2D7A0A087X1C5 515 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 CCL15-CCL14A0A0B4J2E2 113 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 PATL2C9JE40 543 aaKnown RBP15.3■□□□□ 0.04
CLIP2-209ENST00000493166 HIP1O00291 1037 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 TRPA1O75762 1119 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 GDF11O95390 407 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 ASNSP08243 561 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 CTCFP49711 727 aaPredicted RBP15.3■□□□□ 0.04
CLIP2-209ENST00000493166 EVX2Q03828 476 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 GABPAQ06546 454 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 NMIQ13287 307 aaPredicted RBP15.3■□□□□ 0.04
CLIP2-209ENST00000493166 CCL15Q16663 113 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 MCMDC2Q4G0Z9 681 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 C12orf60Q5U649 245 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 TATDN1Q6P1N9 297 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 CTR9Q6PD62 1173 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms