RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 PHIPQ8WWQ0 1821 aa15.06■□□□□ 0
GPNMB-214ENST00000492858 FAM196BA6NMK8 535 aa15.06■□□□□ 0
GPNMB-214ENST00000492858 ZNF280CQ8ND82 737 aa15.06■□□□□ 0
GPNMB-214ENST00000492858 CDX2Q99626 313 aaPredicted RBP15.06■□□□□ 0
GPNMB-214ENST00000492858 GNL3LQ9NVN8 582 aaKnown RBP15.06■□□□□ 0
GPNMB-214ENST00000492858 GAKO14976 1311 aa15.06■□□□□ 0
GPNMB-214ENST00000492858 SALL1Q9NSC2 1324 aa15.06■□□□□ 0
GPNMB-214ENST00000492858 EYA2O00167 538 aa15.05■□□□□ -0
GPNMB-214ENST00000492858 XRCC5P13010 732 aaKnown RBP15.05■□□□□ -0
GPNMB-214ENST00000492858 ZKSCAN1P17029 563 aaPredicted RBP15.05■□□□□ -0
GPNMB-214ENST00000492858 CACNB2Q08289 660 aaPredicted RBP15.05■□□□□ -0
GPNMB-214ENST00000492858 SOCS4Q8WXH5 440 aa15.05■□□□□ -0
GPNMB-214ENST00000492858 NUDT12Q9BQG2 462 aa15.05■□□□□ -0
GPNMB-214ENST00000492858 MORF4L1Q9UBU8 362 aa15.05■□□□□ -0
GPNMB-214ENST00000492858 DENND2AQ9ULE3 1009 aa15.05■□□□□ -0
GPNMB-214ENST00000492858 SALL2Q9Y467 1007 aaPredicted RBP15.05■□□□□ -0
GPNMB-214ENST00000492858 TTC28Q96AY4 2481 aa15.05■□□□□ -0
GPNMB-214ENST00000492858 MYH13Q9UKX3 1938 aa15.04■□□□□ -0
GPNMB-214ENST00000492858 CCND3P30281 292 aaPredicted RBP15.04■□□□□ -0
GPNMB-214ENST00000492858 LHX8Q68G74 356 aa15.04■□□□□ -0
GPNMB-214ENST00000492858 DZIP1Q86YF9 867 aaKnown RBP15.04■□□□□ -0
GPNMB-214ENST00000492858 WDR63Q8IWG1 891 aa15.04■□□□□ -0
GPNMB-214ENST00000492858 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.04■□□□□ -0
GPNMB-214ENST00000492858 TBC1D12O60347 775 aa15.03■□□□□ -0
GPNMB-214ENST00000492858 PEX10O60683 326 aa15.03■□□□□ -0
GPNMB-214ENST00000492858 BTDP43251 543 aa15.03■□□□□ -0
GPNMB-214ENST00000492858 PHKA1P46020 1223 aa15.03■□□□□ -0
GPNMB-214ENST00000492858 IRX3P78415 501 aaPredicted RBP15.03■□□□□ -0
GPNMB-214ENST00000492858 PDE3AQ14432 1141 aa15.03■□□□□ -0
GPNMB-214ENST00000492858 ATP2B3Q16720 1220 aa15.03■□□□□ -0
GPNMB-214ENST00000492858 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
GPNMB-214ENST00000492858 TRMT44Q8IYL2 757 aaKnown RBP15.03■□□□□ -0
GPNMB-214ENST00000492858 ZGPATQ8N5A5 531 aaKnown RBP15.03■□□□□ -0
GPNMB-214ENST00000492858 SENP6Q9GZR1 1112 aaPredicted RBP15.03■□□□□ -0
GPNMB-214ENST00000492858 OSBPL5Q9H0X9 879 aaPredicted RBP15.03■□□□□ -0
GPNMB-214ENST00000492858 PLXNB2O15031 1838 aa15.03■□□□□ -0
GPNMB-214ENST00000492858 LOC285556D6RIA3 1793 aa15.03■□□□□ -0
GPNMB-214ENST00000492858 SEMA3EO15041 775 aa15.02■□□□□ -0
GPNMB-214ENST00000492858 RFX5P48382 616 aaPredicted RBP15.02■□□□□ -0
GPNMB-214ENST00000492858 CCL14Q16627 93 aa15.02■□□□□ -0
GPNMB-214ENST00000492858 CCDC184Q52MB2 194 aa15.02■□□□□ -0
GPNMB-214ENST00000492858 SH3D19Q5HYK7 790 aa15.02■□□□□ -0
GPNMB-214ENST00000492858 ATG9AQ7Z3C6 839 aa15.02■□□□□ -0
GPNMB-214ENST00000492858 SLF2Q8IX21 1173 aa15.02■□□□□ -0
GPNMB-214ENST00000492858 MYLIPQ8WY64 445 aa15.02■□□□□ -0
GPNMB-214ENST00000492858 TBC1D2Q9BYX2 928 aa15.02■□□□□ -0
GPNMB-214ENST00000492858 SEMA6BQ9H3T3 888 aa15.02■□□□□ -0
GPNMB-214ENST00000492858 USP17L5A8MUK1 530 aa15.01□□□□□ -0.01
GPNMB-214ENST00000492858 CAP2P40123 477 aa15.01□□□□□ -0.01
GPNMB-214ENST00000492858 ATN1P54259 1190 aaPredicted RBP15.01□□□□□ -0.01
GPNMB-214ENST00000492858 CCAR1Q8IX12 1150 aaKnown RBP15.01□□□□□ -0.01
GPNMB-214ENST00000492858 GPRC5AQ8NFJ5 357 aa15.01□□□□□ -0.01
GPNMB-214ENST00000492858 SYMPKQ92797 1274 aaKnown RBP15.01□□□□□ -0.01
GPNMB-214ENST00000492858 FAM163AQ96GL9 167 aaPredicted RBP15.01□□□□□ -0.01
GPNMB-214ENST00000492858 P2RX7Q99572 595 aaKnown RBP15.01□□□□□ -0.01
GPNMB-214ENST00000492858 SIL1Q9H173 461 aa15.01□□□□□ -0.01
GPNMB-214ENST00000492858 TXNRD2Q9NNW7 524 aa15.01□□□□□ -0.01
GPNMB-214ENST00000492858 ABCF2Q9UG63 623 aa15.01□□□□□ -0.01
GPNMB-214ENST00000492858 PRKAG2Q9UGJ0 569 aa15.01□□□□□ -0.01
GPNMB-214ENST00000492858 MROH7-TTC4A0A0A0MT08 1334 aa15□□□□□ -0.01
GPNMB-214ENST00000492858 COL9A1P20849 921 aa15□□□□□ -0.01
GPNMB-214ENST00000492858 MAPK4P31152 587 aa15□□□□□ -0.01
GPNMB-214ENST00000492858 RGS2P41220 211 aa15□□□□□ -0.01
GPNMB-214ENST00000492858 RHBDL3P58872 404 aa15□□□□□ -0.01
GPNMB-214ENST00000492858 HERVK_113P62684 666 aa15□□□□□ -0.01
GPNMB-214ENST00000492858 MTMR2Q13614 643 aa15□□□□□ -0.01
GPNMB-214ENST00000492858 RRP1BQ14684 758 aaKnown RBP15□□□□□ -0.01
GPNMB-214ENST00000492858 USP6NLQ92738 828 aa15□□□□□ -0.01
GPNMB-214ENST00000492858 CEP126Q9P2H0 1117 aa15□□□□□ -0.01
GPNMB-214ENST00000492858 SHHQ15465 462 aa14.99□□□□□ -0.01
GPNMB-214ENST00000492858 APBA2Q99767 749 aa14.99□□□□□ -0.01
GPNMB-214ENST00000492858 USP44Q9H0E7 712 aa14.99□□□□□ -0.01
GPNMB-214ENST00000492858 PORCNQ9H237 461 aa14.99□□□□□ -0.01
GPNMB-214ENST00000492858 AS3MTQ9HBK9 375 aa14.99□□□□□ -0.01
GPNMB-214ENST00000492858 TMOD4Q9NZQ9 345 aa14.99□□□□□ -0.01
GPNMB-214ENST00000492858 MYH2Q9UKX2 1941 aa14.99□□□□□ -0.01
GPNMB-214ENST00000492858 NPM3O75607 178 aaKnown RBP14.98□□□□□ -0.01
GPNMB-214ENST00000492858 FOSL2P15408 326 aa14.98□□□□□ -0.01
GPNMB-214ENST00000492858 ADORA1P30542 326 aa14.98□□□□□ -0.01
GPNMB-214ENST00000492858 HOXA7P31268 230 aaPredicted RBP14.98□□□□□ -0.01
GPNMB-214ENST00000492858 BACE1P56817 501 aa14.98□□□□□ -0.01
GPNMB-214ENST00000492858 ERVK-9P63128 1117 aa14.98□□□□□ -0.01
GPNMB-214ENST00000492858 ERVK-24P63145 666 aa14.98□□□□□ -0.01
GPNMB-214ENST00000492858 RASGRF1Q13972 1273 aa14.98□□□□□ -0.01
GPNMB-214ENST00000492858 C9orf50Q5SZB4 431 aa14.98□□□□□ -0.01
GPNMB-214ENST00000492858 MORN1Q5T089 497 aa14.98□□□□□ -0.01
GPNMB-214ENST00000492858 SPTY2D1Q68D10 685 aaPredicted RBP14.98□□□□□ -0.01
GPNMB-214ENST00000492858 CCDC102BQ68D86 513 aa14.98□□□□□ -0.01
GPNMB-214ENST00000492858 GPR142Q7Z601 462 aa14.98□□□□□ -0.01
GPNMB-214ENST00000492858 PLEKHH3Q7Z736 793 aa14.98□□□□□ -0.01
GPNMB-214ENST00000492858 TTYH1Q9H313 450 aaPredicted RBP14.98□□□□□ -0.01
GPNMB-214ENST00000492858 RBPJLQ9UBG7 517 aa14.98□□□□□ -0.01
GPNMB-214ENST00000492858 GPR75-ASB3A0A0A6YYF3 556 aa14.97□□□□□ -0.01
GPNMB-214ENST00000492858 RTP1P59025 263 aa14.97□□□□□ -0.01
GPNMB-214ENST00000492858 MECOMQ03112 1051 aa14.97□□□□□ -0.01
GPNMB-214ENST00000492858 Q3C1V9 767 aa14.97□□□□□ -0.01
GPNMB-214ENST00000492858 PAGR1Q9BTK6 254 aa14.97□□□□□ -0.01
GPNMB-214ENST00000492858 WDR18Q9BV38 432 aa14.97□□□□□ -0.01
GPNMB-214ENST00000492858 CWC22Q9HCG8 908 aaKnown RBP14.97□□□□□ -0.01
GPNMB-214ENST00000492858 ATP11BQ9Y2G3 1177 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms