RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SPRYD7Q5W111 196 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 SNX21Q969T3 373 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 WNK4Q96J92 1243 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 WRNIP1Q96S55 665 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 STAP2Q9UGK3 403 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 ZNF112Q9UJU3 913 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 FLT1P17948 1338 aa11.26□□□□□ -0.61
BRCA1-219ENST00000491747 MAGEB6P1A0A0J9YX57 407 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 FAM196BA6NMK8 535 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 PHF20L1A8MW92 1017 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 PLCG2P16885 1265 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 PDE1AP54750 535 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 CHD1LQ86WJ1 897 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 UBE2Q2Q8WVN8 375 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 ZNF341Q9BYN7 854 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 SNCAIPQ9Y6H5 919 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 BAZ2AQ9UIF9 1905 aaKnown RBP11.25□□□□□ -0.61
BRCA1-219ENST00000491747 PHIPQ8WWQ0 1821 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 DOCK1Q14185 1865 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 UNCXA6NJT0 531 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 MAP2K1Q02750 393 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-219ENST00000491747 DCAF15Q66K64 600 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 LCORLQ8N3X6 602 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 KBTBD3Q8NAB2 608 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 HOOK2Q96ED9 719 aa11.25□□□□□ -0.61
BRCA1-219ENST00000491747 SAP30BPQ9UHR5 308 aaKnown RBP11.25□□□□□ -0.61
BRCA1-219ENST00000491747 GLRX3O76003 335 aaKnown RBP11.24□□□□□ -0.61
BRCA1-219ENST00000491747 SLC4A8Q2Y0W8 1093 aa11.24□□□□□ -0.61
BRCA1-219ENST00000491747 TMED8Q6PL24 325 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-219ENST00000491747 PUS7LQ9H0K6 701 aaKnown RBP11.24□□□□□ -0.61
BRCA1-219ENST00000491747 ARMT1Q9H993 441 aa11.24□□□□□ -0.61
BRCA1-219ENST00000491747 PALD1Q9ULE6 856 aa11.24□□□□□ -0.61
BRCA1-219ENST00000491747 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-219ENST00000491747 ERC2O15083 957 aa11.24□□□□□ -0.61
BRCA1-219ENST00000491747 RRP1BQ14684 758 aaKnown RBP11.24□□□□□ -0.61
BRCA1-219ENST00000491747 UBE3CQ15386 1083 aa11.24□□□□□ -0.61
BRCA1-219ENST00000491747 OPTNQ96CV9 577 aa11.24□□□□□ -0.61
BRCA1-219ENST00000491747 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.24□□□□□ -0.61
BRCA1-219ENST00000491747 TSKSQ9UJT2 592 aa11.24□□□□□ -0.61
BRCA1-219ENST00000491747 PRKAB2O43741 272 aa11.23□□□□□ -0.61
BRCA1-219ENST00000491747 PTMSP20962 102 aa11.23□□□□□ -0.61
BRCA1-219ENST00000491747 CLCN1P35523 988 aa11.23□□□□□ -0.61
BRCA1-219ENST00000491747 EVX2Q03828 476 aa11.23□□□□□ -0.61
BRCA1-219ENST00000491747 PLEKHM2Q8IWE5 1019 aa11.23□□□□□ -0.61
BRCA1-219ENST00000491747 SDR42E1Q8WUS8 393 aa11.23□□□□□ -0.61
BRCA1-219ENST00000491747 GBP4Q96PP9 640 aa11.23□□□□□ -0.61
BRCA1-219ENST00000491747 MBD4O95243 580 aa11.23□□□□□ -0.61
BRCA1-219ENST00000491747 DDIT3P35638 169 aa11.23□□□□□ -0.61
BRCA1-219ENST00000491747 USP5P45974 858 aa11.23□□□□□ -0.61
BRCA1-219ENST00000491747 BMP2KLQ5H9B9 411 aa11.23□□□□□ -0.61
BRCA1-219ENST00000491747 PANK2Q9BZ23 570 aa11.23□□□□□ -0.61
BRCA1-219ENST00000491747 DNAJC18Q9H819 358 aa11.23□□□□□ -0.61
BRCA1-219ENST00000491747 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-219ENST00000491747 CSADQ9Y600 493 aa11.23□□□□□ -0.61
BRCA1-219ENST00000491747 TBC1D12O60347 775 aa11.22□□□□□ -0.61
BRCA1-219ENST00000491747 ZBTB48P10074 688 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-219ENST00000491747 TM4SF4P48230 202 aa11.22□□□□□ -0.61
BRCA1-219ENST00000491747 OSBP2Q969R2 916 aa11.22□□□□□ -0.61
BRCA1-219ENST00000491747 OTUD5Q96G74 571 aa11.22□□□□□ -0.61
BRCA1-219ENST00000491747 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.22□□□□□ -0.61
BRCA1-219ENST00000491747 GRPEL1Q9HAV7 217 aa11.22□□□□□ -0.61
BRCA1-219ENST00000491747 RNF186Q9NXI6 227 aa11.22□□□□□ -0.61
BRCA1-219ENST00000491747 SPDYE5A6NIY4 337 aa11.21□□□□□ -0.61
BRCA1-219ENST00000491747 RNF113AO15541 343 aaKnown RBP11.21□□□□□ -0.61
BRCA1-219ENST00000491747 HSPA8P11142 646 aaKnown RBP11.21□□□□□ -0.61
BRCA1-219ENST00000491747 NOL9Q5SY16 702 aaKnown RBP11.21□□□□□ -0.61
BRCA1-219ENST00000491747 ZSCAN25Q6NSZ9 544 aa11.21□□□□□ -0.61
BRCA1-219ENST00000491747 CERS3Q8IU89 383 aa11.21□□□□□ -0.61
BRCA1-219ENST00000491747 MS4A4AQ96JQ5 239 aa11.21□□□□□ -0.61
BRCA1-219ENST00000491747 SEC62Q99442 399 aaKnown RBP11.21□□□□□ -0.61
BRCA1-219ENST00000491747 DHX36Q9H2U1 1008 aaKnown RBP11.21□□□□□ -0.61
BRCA1-219ENST00000491747 PI4KBQ9UBF8 816 aa11.21□□□□□ -0.61
BRCA1-219ENST00000491747 PTPRFP10586 1907 aa11.21□□□□□ -0.61
BRCA1-219ENST00000491747 PLCD1P51178 756 aa11.21□□□□□ -0.62
BRCA1-219ENST00000491747 JAG1P78504 1218 aa11.21□□□□□ -0.62
BRCA1-219ENST00000491747 SKOR2Q2VWA4 1001 aaPredicted RBP11.21□□□□□ -0.62
BRCA1-219ENST00000491747 METTL16Q86W50 562 aaKnown RBP11.21□□□□□ -0.62
BRCA1-219ENST00000491747 AIDAQ96BJ3 306 aa11.21□□□□□ -0.62
BRCA1-219ENST00000491747 PTPN18Q99952 460 aa11.21□□□□□ -0.62
BRCA1-219ENST00000491747 CRNKL1Q9BZJ0 848 aaKnown RBP11.21□□□□□ -0.62
BRCA1-219ENST00000491747 DCP1AQ9NPI6 582 aaPredicted RBP11.21□□□□□ -0.62
BRCA1-219ENST00000491747 SMIM22K7EJ46 135 aa11.2□□□□□ -0.62
BRCA1-219ENST00000491747 M0R2C6 588 aa11.2□□□□□ -0.62
BRCA1-219ENST00000491747 TRPA1O75762 1119 aa11.2□□□□□ -0.62
BRCA1-219ENST00000491747 LBX1P52954 281 aa11.2□□□□□ -0.62
BRCA1-219ENST00000491747 SHROOM1Q2M3G4 852 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-219ENST00000491747 CCDC84Q86UT8 332 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-219ENST00000491747 ERO1BQ86YB8 467 aa11.2□□□□□ -0.62
BRCA1-219ENST00000491747 FSD1Q9BTV5 496 aa11.2□□□□□ -0.62
BRCA1-219ENST00000491747 OSBPL3Q9H4L5 887 aa11.2□□□□□ -0.62
BRCA1-219ENST00000491747 IGF2BP3O00425 579 aaKnown RBP eCLIP11.2□□□□□ -0.62
BRCA1-219ENST00000491747 IRF6O14896 467 aa11.2□□□□□ -0.62
BRCA1-219ENST00000491747 HSP90AA1P07900 732 aaKnown RBP11.2□□□□□ -0.62
BRCA1-219ENST00000491747 CYP2D6P10635 497 aa11.2□□□□□ -0.62
BRCA1-219ENST00000491747 SCYL3Q8IZE3 742 aa11.2□□□□□ -0.62
BRCA1-219ENST00000491747 APPBP2Q92624 585 aa11.2□□□□□ -0.62
BRCA1-219ENST00000491747 STRBPQ96SI9 672 aaKnown RBP11.2□□□□□ -0.62
BRCA1-219ENST00000491747 BEGAINQ9BUH8 593 aa11.2□□□□□ -0.62
BRCA1-219ENST00000491747 CASP8AP2Q9UKL3 1982 aa11.19□□□□□ -0.62
BRCA1-219ENST00000491747 MYH8P13535 1937 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms