RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 GPR75-ASB3A0A0A6YYF3 556 aa16.45■□□□□ 0.22
USF1-206ENST00000491629 TBC1D12O60347 775 aa16.45■□□□□ 0.22
USF1-206ENST00000491629 PEX10O60683 326 aa16.45■□□□□ 0.22
USF1-206ENST00000491629 UBTFL1P0CB47 393 aaPredicted RBP16.45■□□□□ 0.22
USF1-206ENST00000491629 MECOMQ03112 1051 aa16.45■□□□□ 0.22
USF1-206ENST00000491629 SLFN5Q08AF3 891 aa16.45■□□□□ 0.22
USF1-206ENST00000491629 PROCA1Q8NCQ7 364 aaPredicted RBP16.45■□□□□ 0.22
USF1-206ENST00000491629 COA7Q96BR5 231 aa16.45■□□□□ 0.22
USF1-206ENST00000491629 EYSQ5T1H1 3165 aa16.44■□□□□ 0.22
USF1-206ENST00000491629 VCANP13611 3396 aa16.44■□□□□ 0.22
USF1-206ENST00000491629 BMP8BP34820 402 aa16.44■□□□□ 0.22
USF1-206ENST00000491629 HMGCS2P54868 508 aa16.44■□□□□ 0.22
USF1-206ENST00000491629 SPP2Q13103 211 aa16.44■□□□□ 0.22
USF1-206ENST00000491629 PI16Q6UXB8 463 aa16.44■□□□□ 0.22
USF1-206ENST00000491629 NECAB2Q7Z6G3 386 aa16.44■□□□□ 0.22
USF1-206ENST00000491629 DZIP1Q86YF9 867 aaKnown RBP16.44■□□□□ 0.22
USF1-206ENST00000491629 C7orf61Q8IZ16 206 aa16.44■□□□□ 0.22
USF1-206ENST00000491629 ZGPATQ8N5A5 531 aaKnown RBP16.44■□□□□ 0.22
USF1-206ENST00000491629 ZMYND8Q9ULU4 1186 aaPredicted RBP16.44■□□□□ 0.22
USF1-206ENST00000491629 COL2A1P02458 1487 aaPredicted RBP16.43■□□□□ 0.22
USF1-206ENST00000491629 NPM3O75607 178 aaKnown RBP16.43■□□□□ 0.22
USF1-206ENST00000491629 HMGCRP04035 888 aa16.43■□□□□ 0.22
USF1-206ENST00000491629 CAPN2P17655 700 aa16.43■□□□□ 0.22
USF1-206ENST00000491629 JAG1P78504 1218 aa16.43■□□□□ 0.22
USF1-206ENST00000491629 ALDH1L2Q3SY69 923 aa16.43■□□□□ 0.22
USF1-206ENST00000491629 CDCA7LQ96GN5 454 aa16.43■□□□□ 0.22
USF1-206ENST00000491629 XAGE2Q96GT9 111 aa16.43■□□□□ 0.22
USF1-206ENST00000491629 ASCC2Q9H1I8 757 aaPredicted RBP16.43■□□□□ 0.22
USF1-206ENST00000491629 A0A1B0GUL7 405 aa16.42■□□□□ 0.22
USF1-206ENST00000491629 E9PSI1 815 aa16.42■□□□□ 0.22
USF1-206ENST00000491629 SYN1P17600 705 aa16.42■□□□□ 0.22
USF1-206ENST00000491629 TBC1D9Q6ZT07 1266 aa16.42■□□□□ 0.22
USF1-206ENST00000491629 Q7L0L9 218 aa16.42■□□□□ 0.22
USF1-206ENST00000491629 ANKLE1Q8NAG6 615 aa16.42■□□□□ 0.22
USF1-206ENST00000491629 ZNF280CQ8ND82 737 aa16.42■□□□□ 0.22
USF1-206ENST00000491629 TRIB2Q92519 343 aa16.42■□□□□ 0.22
USF1-206ENST00000491629 NSUN4Q96CB9 384 aaKnown RBP16.42■□□□□ 0.22
USF1-206ENST00000491629 MEIS3Q99687 375 aa16.42■□□□□ 0.22
USF1-206ENST00000491629 OSBPL5Q9H0X9 879 aaPredicted RBP16.42■□□□□ 0.22
USF1-206ENST00000491629 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.42■□□□□ 0.22
USF1-206ENST00000491629 HMG20BQ9P0W2 317 aa16.42■□□□□ 0.22
USF1-206ENST00000491629 PFASO15067 1338 aa16.42■□□□□ 0.22
USF1-206ENST00000491629 RPTORQ8N122 1335 aa16.42■□□□□ 0.22
USF1-206ENST00000491629 MAST2Q6P0Q8 1798 aa16.41■□□□□ 0.22
USF1-206ENST00000491629 CAP2P40123 477 aa16.41■□□□□ 0.22
USF1-206ENST00000491629 TFCP2Q12800 502 aa16.41■□□□□ 0.22
USF1-206ENST00000491629 SHROOM1Q2M3G4 852 aaPredicted RBP16.41■□□□□ 0.22
USF1-206ENST00000491629 SH3D19Q5HYK7 790 aa16.41■□□□□ 0.22
USF1-206ENST00000491629 POTEEQ6S8J3 1075 aa16.41■□□□□ 0.22
USF1-206ENST00000491629 SMC4Q9NTJ3 1288 aa16.41■□□□□ 0.22
USF1-206ENST00000491629 PNMA3Q9UL41 463 aa16.41■□□□□ 0.22
USF1-206ENST00000491629 MYH1P12882 1939 aa16.41■□□□□ 0.22
USF1-206ENST00000491629 MAGEA10P43363 369 aaPredicted RBP16.4■□□□□ 0.22
USF1-206ENST00000491629 GCLCP48506 637 aaPredicted RBP16.4■□□□□ 0.22
USF1-206ENST00000491629 MAP3K21Q5TCX8 1036 aa16.4■□□□□ 0.22
USF1-206ENST00000491629 SPTY2D1Q68D10 685 aaPredicted RBP16.4■□□□□ 0.22
USF1-206ENST00000491629 ERICH6Q7L0X2 663 aa16.4■□□□□ 0.22
USF1-206ENST00000491629 SLF2Q8IX21 1173 aa16.4■□□□□ 0.22
USF1-206ENST00000491629 TRMT2AQ8IZ69 625 aaKnown RBP16.4■□□□□ 0.22
USF1-206ENST00000491629 TXNRD2Q9NNW7 524 aa16.4■□□□□ 0.22
USF1-206ENST00000491629 MORF4L1Q9UBU8 362 aa16.4■□□□□ 0.22
USF1-206ENST00000491629 OGDHLQ9ULD0 1010 aa16.4■□□□□ 0.22
USF1-206ENST00000491629 NOB1Q9ULX3 412 aaKnown RBP16.4■□□□□ 0.22
USF1-206ENST00000491629 CDH23Q9H251 3354 aa16.39■□□□□ 0.21
USF1-206ENST00000491629 NBPF3Q9H094 633 aa16.39■□□□□ 0.21
USF1-206ENST00000491629 DNAJC18Q9H819 358 aa16.39■□□□□ 0.21
USF1-206ENST00000491629 HMX1Q9NP08 348 aaPredicted RBP16.39■□□□□ 0.21
USF1-206ENST00000491629 SPTBN5Q9NRC6 3674 aaKnown RBP16.39■□□□□ 0.21
USF1-206ENST00000491629 USP17L5A8MUK1 530 aa16.38■□□□□ 0.21
USF1-206ENST00000491629 LRIT3Q3SXY7 679 aa16.38■□□□□ 0.21
USF1-206ENST00000491629 GPR153Q6NV75 609 aa16.38■□□□□ 0.21
USF1-206ENST00000491629 DEFB123Q8N688 67 aa16.38■□□□□ 0.21
USF1-206ENST00000491629 P2RX7Q99572 595 aaKnown RBP16.38■□□□□ 0.21
USF1-206ENST00000491629 C11orf49Q9H6J7 331 aa16.38■□□□□ 0.21
USF1-206ENST00000491629 PRUNE2Q8WUY3 3088 aa16.37■□□□□ 0.21
USF1-206ENST00000491629 COL6A1P12109 1028 aa16.37■□□□□ 0.21
USF1-206ENST00000491629 CYP2B6P20813 491 aa16.37■□□□□ 0.21
USF1-206ENST00000491629 SPATA5Q8NB90 893 aa16.37■□□□□ 0.21
USF1-206ENST00000491629 SH3RF3Q8TEJ3 882 aaPredicted RBP16.37■□□□□ 0.21
USF1-206ENST00000491629 USP6NLQ92738 828 aa16.37■□□□□ 0.21
USF1-206ENST00000491629 MTMR10Q9NXD2 777 aa16.37■□□□□ 0.21
USF1-206ENST00000491629 LTBP2Q14767 1821 aa16.36■□□□□ 0.21
USF1-206ENST00000491629 PRKAR2AP13861 404 aaKnown RBP16.36■□□□□ 0.21
USF1-206ENST00000491629 ARID4AP29374 1257 aaPredicted RBP16.36■□□□□ 0.21
USF1-206ENST00000491629 MCAMP43121 646 aa16.36■□□□□ 0.21
USF1-206ENST00000491629 MTX1Q13505 466 aa16.36■□□□□ 0.21
USF1-206ENST00000491629 MTMR2Q13614 643 aa16.36■□□□□ 0.21
USF1-206ENST00000491629 MVPQ14764 893 aaKnown RBP16.36■□□□□ 0.21
USF1-206ENST00000491629 Q3C1V9 767 aa16.36■□□□□ 0.21
USF1-206ENST00000491629 LHX8Q68G74 356 aa16.36■□□□□ 0.21
USF1-206ENST00000491629 WDR18Q9BV38 432 aa16.36■□□□□ 0.21
USF1-206ENST00000491629 RBPJLQ9UBG7 517 aa16.36■□□□□ 0.21
USF1-206ENST00000491629 RLFQ13129 1914 aa16.35■□□□□ 0.21
USF1-206ENST00000491629 SRGAP3O43295 1099 aa16.35■□□□□ 0.21
USF1-206ENST00000491629 MAP4K4O95819 1239 aaPredicted RBP16.35■□□□□ 0.21
USF1-206ENST00000491629 HOXA7P31268 230 aaPredicted RBP16.35■□□□□ 0.21
USF1-206ENST00000491629 BACE1P56817 501 aa16.35■□□□□ 0.21
USF1-206ENST00000491629 CACNB2Q08289 660 aaPredicted RBP16.35■□□□□ 0.21
USF1-206ENST00000491629 PABPC4Q13310 644 aaKnown RBP eCLIP16.35■□□□□ 0.21
USF1-206ENST00000491629 CCL14Q16627 93 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms