RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ANKRD45Q5TZF3 282 aa9.28□□□□□ -0.92
CLDN1-202ENST00000490800 ARMC9Q7Z3E5 817 aa9.28□□□□□ -0.92
CLDN1-202ENST00000490800 FBXO33Q7Z6M2 555 aa9.28□□□□□ -0.92
CLDN1-202ENST00000490800 SPIRE2Q8WWL2 714 aa9.28□□□□□ -0.92
CLDN1-202ENST00000490800 VEZTQ9HBM0 779 aa9.28□□□□□ -0.92
CLDN1-202ENST00000490800 ANGEL1Q9UNK9 670 aaKnown RBP9.28□□□□□ -0.92
CLDN1-202ENST00000490800 TTF2Q9UNY4 1162 aaKnown RBP9.28□□□□□ -0.92
CLDN1-202ENST00000490800 IQSEC3Q9UPP2 1182 aaPredicted RBP9.28□□□□□ -0.92
CLDN1-202ENST00000490800 RNF40O75150 1001 aa9.27□□□□□ -0.93
CLDN1-202ENST00000490800 TBC1D8O95759 1140 aa9.27□□□□□ -0.93
CLDN1-202ENST00000490800 TM4SF4P48230 202 aa9.27□□□□□ -0.93
CLDN1-202ENST00000490800 BCAMP50895 628 aa9.27□□□□□ -0.93
CLDN1-202ENST00000490800 DIXDC1Q155Q3 683 aa9.27□□□□□ -0.93
CLDN1-202ENST00000490800 GRIK5Q16478 980 aa9.27□□□□□ -0.93
CLDN1-202ENST00000490800 LDLRAD1Q5T700 205 aa9.27□□□□□ -0.93
CLDN1-202ENST00000490800 NBPF12Q5TAG4 269 aaPredicted RBP9.27□□□□□ -0.93
CLDN1-202ENST00000490800 VPS37DQ86XT2 251 aa9.27□□□□□ -0.93
CLDN1-202ENST00000490800 LNPKQ9C0E8 428 aa9.27□□□□□ -0.93
CLDN1-202ENST00000490800 EXOC6BQ9Y2D4 811 aa9.27□□□□□ -0.93
CLDN1-202ENST00000490800 PPP1R12BO60237 982 aaPredicted RBP9.26□□□□□ -0.93
CLDN1-202ENST00000490800 SMARCA5O60264 1052 aaPredicted RBP9.26□□□□□ -0.93
CLDN1-202ENST00000490800 FRAT2O75474 233 aaPredicted RBP9.26□□□□□ -0.93
CLDN1-202ENST00000490800 RFX5P48382 616 aaPredicted RBP9.26□□□□□ -0.93
CLDN1-202ENST00000490800 CHAF1AQ13111 956 aaPredicted RBP9.26□□□□□ -0.93
CLDN1-202ENST00000490800 RASA3Q14644 834 aa9.26□□□□□ -0.93
CLDN1-202ENST00000490800 SUPT20HL1Q3ZLR7 823 aa9.26□□□□□ -0.93
CLDN1-202ENST00000490800 CAVIN4Q5BKX8 364 aa9.26□□□□□ -0.93
CLDN1-202ENST00000490800 VGLL2Q8N8G2 317 aa9.26□□□□□ -0.93
CLDN1-202ENST00000490800 SLC10A4Q96EP9 437 aa9.26□□□□□ -0.93
CLDN1-202ENST00000490800 TDRD3Q9H7E2 651 aaKnown RBP9.26□□□□□ -0.93
CLDN1-202ENST00000490800 ZNF70Q9UC06 446 aaPredicted RBP9.26□□□□□ -0.93
CLDN1-202ENST00000490800 SERPINA10Q9UK55 444 aa9.26□□□□□ -0.93
CLDN1-202ENST00000490800 NOP58Q9Y2X3 529 aaKnown RBP9.26□□□□□ -0.93
CLDN1-202ENST00000490800 CASP8AP2Q9UKL3 1982 aa9.26□□□□□ -0.93
CLDN1-202ENST00000490800 ZNF646O15015 1829 aaPredicted RBP9.26□□□□□ -0.93
CLDN1-202ENST00000490800 EYA2O00167 538 aa9.25□□□□□ -0.93
CLDN1-202ENST00000490800 APBB1O00213 710 aa9.25□□□□□ -0.93
CLDN1-202ENST00000490800 RAB11FIP3O75154 756 aa9.25□□□□□ -0.93
CLDN1-202ENST00000490800 USP2O75604 605 aaPredicted RBP9.25□□□□□ -0.93
CLDN1-202ENST00000490800 SURF6O75683 361 aaKnown RBP9.25□□□□□ -0.93
CLDN1-202ENST00000490800 CRKP46108 304 aa9.25□□□□□ -0.93
CLDN1-202ENST00000490800 SLC4A3P48751 1232 aa9.25□□□□□ -0.93
CLDN1-202ENST00000490800 LSM11P83369 360 aaKnown RBP eCLIP9.25□□□□□ -0.93
CLDN1-202ENST00000490800 MAP3K11Q16584 847 aa9.25□□□□□ -0.93
CLDN1-202ENST00000490800 SPRYD7Q5W111 196 aa9.25□□□□□ -0.93
CLDN1-202ENST00000490800 CLMNQ96JQ2 1002 aa9.25□□□□□ -0.93
CLDN1-202ENST00000490800 PA2G4Q9UQ80 394 aaKnown RBP9.25□□□□□ -0.93
CLDN1-202ENST00000490800 PPP2R3BQ9Y5P8 575 aa9.25□□□□□ -0.93
CLDN1-202ENST00000490800 PAPPA2Q9BXP8 1791 aa9.24□□□□□ -0.93
CLDN1-202ENST00000490800 TCP10L2B9ZVM9 353 aa9.24□□□□□ -0.93
CLDN1-202ENST00000490800 IFIT1P09914 478 aaKnown RBP9.24□□□□□ -0.93
CLDN1-202ENST00000490800 FGFR2P21802 821 aa9.24□□□□□ -0.93
CLDN1-202ENST00000490800 SREBF2Q12772 1141 aa9.24□□□□□ -0.93
CLDN1-202ENST00000490800 CSPP1Q1MSJ5 1256 aa9.24□□□□□ -0.93
CLDN1-202ENST00000490800 ADGRD1Q6QNK2 874 aa9.24□□□□□ -0.93
CLDN1-202ENST00000490800 ATG9AQ7Z3C6 839 aa9.24□□□□□ -0.93
CLDN1-202ENST00000490800 ZNF296Q8WUU4 475 aaPredicted RBP9.24□□□□□ -0.93
CLDN1-202ENST00000490800 LRRCC1Q9C099 1032 aa9.24□□□□□ -0.93
CLDN1-202ENST00000490800 R3HDMLQ9H3Y0 253 aa9.24□□□□□ -0.93
CLDN1-202ENST00000490800 LIMD1Q9UGP4 676 aa9.24□□□□□ -0.93
CLDN1-202ENST00000490800 TK2O00142 265 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 GPR25O00155 361 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 IREB2P48200 963 aaKnown RBP9.23□□□□□ -0.93
CLDN1-202ENST00000490800 RGS19P49795 217 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 HDLBPQ00341 1268 aaKnown RBP9.23□□□□□ -0.93
CLDN1-202ENST00000490800 TNFAIP1Q13829 316 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 PUM3Q15397 648 aaKnown RBP9.23□□□□□ -0.93
CLDN1-202ENST00000490800 HSP90AB4PQ58FF6 505 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 CTU1Q7Z7A3 348 aaKnown RBP9.23□□□□□ -0.93
CLDN1-202ENST00000490800 LAPTM4BQ86VI4 370 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 PLEKHM2Q8IWE5 1019 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 CDAN1Q8IWY9 1227 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 RHPN1Q8TCX5 695 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 OTUD7AQ8TE49 926 aaPredicted RBP9.23□□□□□ -0.93
CLDN1-202ENST00000490800 TBC1D22AQ8WUA7 517 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 LPIN2Q92539 896 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 TEPSINQ96N21 525 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 MRIQ9BWK5 157 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 SIL1Q9H173 461 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 COPRSQ9NQ92 184 aa9.23□□□□□ -0.93
CLDN1-202ENST00000490800 COL1A1P02452 1464 aaPredicted RBP9.22□□□□□ -0.93
CLDN1-202ENST00000490800 SSC5DA1L4H1 1573 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 MOXD2PA6NHM9 499 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 MANSC4A6NHS7 340 aaPredicted RBP9.22□□□□□ -0.93
CLDN1-202ENST00000490800 UNCXA6NJT0 531 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 KDM4AO75164 1064 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 SLC5A1P13866 664 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 NDUFV2P19404 249 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 CACNB3P54284 484 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 INHBEP58166 350 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 MLLT1Q03111 559 aaPredicted RBP9.22□□□□□ -0.93
CLDN1-202ENST00000490800 SLF2Q8IX21 1173 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 ANKRD13AQ8IZ07 590 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 TEKT1Q969V4 418 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 KIF1BPQ96EK5 621 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 WNK4Q96J92 1243 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 TMEM39BQ9GZU3 492 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 CEP126Q9P2H0 1117 aa9.22□□□□□ -0.93
CLDN1-202ENST00000490800 ZBTB48P10074 688 aaPredicted RBP9.21□□□□□ -0.94
CLDN1-202ENST00000490800 GJA5P36382 358 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms