RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 IMMTQ16891 758 aaKnown RBP23.63■■□□□ 1.37
SHROOM3-209ENST00000490690 PRAMEF18Q5VWM3 479 aa23.63■■□□□ 1.37
SHROOM3-209ENST00000490690 ANO2Q9NQ90 1003 aa23.63■■□□□ 1.37
SHROOM3-209ENST00000490690 FGAP02671 866 aa23.62■■□□□ 1.37
SHROOM3-209ENST00000490690 PDE4BQ07343 736 aa23.62■■□□□ 1.37
SHROOM3-209ENST00000490690 VPS53Q5VIR6 699 aa23.62■■□□□ 1.37
SHROOM3-209ENST00000490690 ANKRD13AQ8IZ07 590 aa23.62■■□□□ 1.37
SHROOM3-209ENST00000490690 RNF41Q9H4P4 317 aaPredicted RBP23.62■■□□□ 1.37
SHROOM3-209ENST00000490690 CREBZFQ9NS37 354 aa23.62■■□□□ 1.37
SHROOM3-209ENST00000490690 PAPPA2Q9BXP8 1791 aa23.62■■□□□ 1.37
SHROOM3-209ENST00000490690 ROBO3Q96MS0 1386 aa23.62■■□□□ 1.37
SHROOM3-209ENST00000490690 NAV1Q8NEY1 1877 aa23.62■■□□□ 1.37
SHROOM3-209ENST00000490690 POLR2AP24928 1970 aaKnown RBP23.61■■□□□ 1.37
SHROOM3-209ENST00000490690 MINDY4BA8MYZ0 360 aa23.61■■□□□ 1.37
SHROOM3-209ENST00000490690 ZNF213O14771 459 aa23.61■■□□□ 1.37
SHROOM3-209ENST00000490690 C1QTNF8P60827 252 aa23.61■■□□□ 1.37
SHROOM3-209ENST00000490690 PPARAQ07869 468 aa23.61■■□□□ 1.37
SHROOM3-209ENST00000490690 HHIPL1Q96JK4 782 aa23.61■■□□□ 1.37
SHROOM3-209ENST00000490690 ANAPC4Q9UJX5 808 aa23.61■■□□□ 1.37
SHROOM3-209ENST00000490690 ANGEL1Q9UNK9 670 aaKnown RBP23.61■■□□□ 1.37
SHROOM3-209ENST00000490690 CSADQ9Y600 493 aa23.61■■□□□ 1.37
SHROOM3-209ENST00000490690 MAP3K9P80192 1104 aa23.6■■□□□ 1.37
SHROOM3-209ENST00000490690 RNF20Q5VTR2 975 aa23.6■■□□□ 1.37
SHROOM3-209ENST00000490690 MAP4K1Q92918 833 aa23.6■■□□□ 1.37
SHROOM3-209ENST00000490690 KLRG1Q96E93 195 aa23.6■■□□□ 1.37
SHROOM3-209ENST00000490690 ZNF112Q9UJU3 913 aa23.6■■□□□ 1.37
SHROOM3-209ENST00000490690 CTNND1O60716 968 aaKnown RBP23.59■■□□□ 1.37
SHROOM3-209ENST00000490690 PLCD1P51178 756 aa23.59■■□□□ 1.37
SHROOM3-209ENST00000490690 GABPAQ06546 454 aa23.59■■□□□ 1.37
SHROOM3-209ENST00000490690 CST9Q5W186 159 aa23.59■■□□□ 1.37
SHROOM3-209ENST00000490690 C16orf86Q6ZW13 317 aa23.59■■□□□ 1.37
SHROOM3-209ENST00000490690 MIGA2Q7L4E1 593 aa23.59■■□□□ 1.37
SHROOM3-209ENST00000490690 CCDC17Q96LX7 622 aa23.59■■□□□ 1.37
SHROOM3-209ENST00000490690 WRNIP1Q96S55 665 aa23.59■■□□□ 1.37
SHROOM3-209ENST00000490690 TBC1D2Q9BYX2 928 aa23.59■■□□□ 1.37
SHROOM3-209ENST00000490690 TLL2Q9Y6L7 1015 aa23.59■■□□□ 1.37
SHROOM3-209ENST00000490690 CDK5RAP2Q96SN8 1893 aa23.59■■□□□ 1.37
SHROOM3-209ENST00000490690 DDX60LQ5H9U9 1706 aaKnown RBP23.59■■□□□ 1.37
SHROOM3-209ENST00000490690 SSC5DA1L4H1 1573 aa23.58■■□□□ 1.37
SHROOM3-209ENST00000490690 USP2O75604 605 aaPredicted RBP23.58■■□□□ 1.37
SHROOM3-209ENST00000490690 CDAN1Q8IWY9 1227 aa23.58■■□□□ 1.37
SHROOM3-209ENST00000490690 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.58■■□□□ 1.37
SHROOM3-209ENST00000490690 MKNK2Q9HBH9 465 aa23.58■■□□□ 1.37
SHROOM3-209ENST00000490690 ABT1Q9ULW3 272 aaKnown RBP23.58■■□□□ 1.37
SHROOM3-209ENST00000490690 TRPM7Q96QT4 1865 aa23.58■■□□□ 1.36
SHROOM3-209ENST00000490690 MYH1P12882 1939 aa23.57■■□□□ 1.36
SHROOM3-209ENST00000490690 FOXP2O15409 715 aa23.57■■□□□ 1.36
SHROOM3-209ENST00000490690 HUNKP57058 714 aa23.57■■□□□ 1.36
SHROOM3-209ENST00000490690 NOL9Q5SY16 702 aaKnown RBP23.57■■□□□ 1.36
SHROOM3-209ENST00000490690 TATDN1Q6P1N9 297 aa23.57■■□□□ 1.36
SHROOM3-209ENST00000490690 LSG1Q9H089 658 aaKnown RBP23.57■■□□□ 1.36
SHROOM3-209ENST00000490690 CABP5Q9NP86 173 aa23.57■■□□□ 1.36
SHROOM3-209ENST00000490690 ASNSP08243 561 aa23.56■■□□□ 1.36
SHROOM3-209ENST00000490690 MCCP23508 829 aa23.56■■□□□ 1.36
SHROOM3-209ENST00000490690 PRKG1Q13976 671 aa23.56■■□□□ 1.36
SHROOM3-209ENST00000490690 CERKLQ49MI3 558 aaPredicted RBP23.56■■□□□ 1.36
SHROOM3-209ENST00000490690 PPP4R3BQ5MIZ7 849 aa23.56■■□□□ 1.36
SHROOM3-209ENST00000490690 LDLRAD1Q5T700 205 aa23.56■■□□□ 1.36
SHROOM3-209ENST00000490690 SAPCD2Q86UD0 394 aa23.56■■□□□ 1.36
SHROOM3-209ENST00000490690 IL25Q9H293 177 aa23.56■■□□□ 1.36
SHROOM3-209ENST00000490690 PICK1Q9NRD5 415 aa23.56■■□□□ 1.36
SHROOM3-209ENST00000490690 CDK8P49336 464 aa23.55■■□□□ 1.36
SHROOM3-209ENST00000490690 SLC4A8Q2Y0W8 1093 aa23.55■■□□□ 1.36
SHROOM3-209ENST00000490690 DLK2Q6UY11 383 aa23.55■■□□□ 1.36
SHROOM3-209ENST00000490690 ZNF444Q8N0Y2 327 aaPredicted RBP23.55■■□□□ 1.36
SHROOM3-209ENST00000490690 CNNM2Q9H8M5 875 aa23.55■■□□□ 1.36
SHROOM3-209ENST00000490690 CYP2D6P10635 497 aa23.54■■□□□ 1.36
SHROOM3-209ENST00000490690 ZKSCAN1P17029 563 aaPredicted RBP23.54■■□□□ 1.36
SHROOM3-209ENST00000490690 HSPA6P17066 643 aa23.54■■□□□ 1.36
SHROOM3-209ENST00000490690 CAP2P40123 477 aa23.54■■□□□ 1.36
SHROOM3-209ENST00000490690 FMR1Q06787 632 aaKnown RBP eCLIP23.54■■□□□ 1.36
SHROOM3-209ENST00000490690 TRDNQ13061 729 aa23.54■■□□□ 1.36
SHROOM3-209ENST00000490690 MFSD6Q6ZSS7 791 aa23.54■■□□□ 1.36
SHROOM3-209ENST00000490690 SCYL3Q8IZE3 742 aa23.54■■□□□ 1.36
SHROOM3-209ENST00000490690 RBM8AQ9Y5S9 174 aaKnown RBP23.54■■□□□ 1.36
SHROOM3-209ENST00000490690 PHF20L1A8MW92 1017 aa23.53■■□□□ 1.36
SHROOM3-209ENST00000490690 PTH1RQ03431 593 aa23.53■■□□□ 1.36
SHROOM3-209ENST00000490690 AKNAD1Q5T1N1 836 aa23.53■■□□□ 1.36
SHROOM3-209ENST00000490690 STAG1Q8WVM7 1258 aa23.53■■□□□ 1.36
SHROOM3-209ENST00000490690 CCDC102AQ96A19 550 aa23.53■■□□□ 1.36
SHROOM3-209ENST00000490690 SLC10A4Q96EP9 437 aa23.53■■□□□ 1.36
SHROOM3-209ENST00000490690 DNAJC18Q9H819 358 aa23.53■■□□□ 1.36
SHROOM3-209ENST00000490690 CYP2D7A0A087X1C5 515 aa23.52■■□□□ 1.36
SHROOM3-209ENST00000490690 ORC4O43929 436 aa23.52■■□□□ 1.36
SHROOM3-209ENST00000490690 FGRP09769 529 aa23.52■■□□□ 1.36
SHROOM3-209ENST00000490690 SHMT1P34896 483 aa23.52■■□□□ 1.36
SHROOM3-209ENST00000490690 ECE1P42892 770 aa23.52■■□□□ 1.36
SHROOM3-209ENST00000490690 KRT23Q9C075 422 aa23.52■■□□□ 1.36
SHROOM3-209ENST00000490690 AS3MTQ9HBK9 375 aa23.52■■□□□ 1.36
SHROOM3-209ENST00000490690 UBE2Q2LH0YL09 131 aa23.51■■□□□ 1.35
SHROOM3-209ENST00000490690 VGLL4Q14135 290 aa23.51■■□□□ 1.35
SHROOM3-209ENST00000490690 KRT32Q14532 448 aa23.51■■□□□ 1.35
SHROOM3-209ENST00000490690 ABCB5Q2M3G0 1257 aa23.51■■□□□ 1.35
SHROOM3-209ENST00000490690 RGMBQ6NW40 437 aa23.51■■□□□ 1.35
SHROOM3-209ENST00000490690 TMEM179Q6ZVK1 233 aa23.51■■□□□ 1.35
SHROOM3-209ENST00000490690 ERO1BQ86YB8 467 aa23.51■■□□□ 1.35
SHROOM3-209ENST00000490690 DYNLL2Q96FJ2 89 aa23.51■■□□□ 1.35
SHROOM3-209ENST00000490690 UPF2Q9HAU5 1272 aaKnown RBP23.51■■□□□ 1.35
SHROOM3-209ENST00000490690 RASSF10A6NK89 507 aa23.5■■□□□ 1.35
SHROOM3-209ENST00000490690 ZBTB48P10074 688 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms