RNA–Protein interactions for RNA: ENST00000490458.1

SNAP29-203, Transcript of synaptosome associated protein 29, humanhuman

TSL 2

Gene SNAP29, Length 972 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-203ENST00000490458 A0A1B0GUL7 405 aa20.23■□□□□ 0.83
SNAP29-203ENST00000490458 SPP2Q13103 211 aa20.23■□□□□ 0.83
SNAP29-203ENST00000490458 ERICH6Q7L0X2 663 aa20.23■□□□□ 0.83
SNAP29-203ENST00000490458 NECAB2Q7Z6G3 386 aa20.23■□□□□ 0.83
SNAP29-203ENST00000490458 XAGE2Q96GT9 111 aa20.23■□□□□ 0.83
SNAP29-203ENST00000490458 MEIS3Q99687 375 aa20.23■□□□□ 0.83
SNAP29-203ENST00000490458 OSBPL5Q9H0X9 879 aaPredicted RBP20.23■□□□□ 0.83
SNAP29-203ENST00000490458 NPM3O75607 178 aaKnown RBP20.22■□□□□ 0.83
SNAP29-203ENST00000490458 CDCA7LQ96GN5 454 aa20.22■□□□□ 0.83
SNAP29-203ENST00000490458 NOB1Q9ULX3 412 aaKnown RBP20.22■□□□□ 0.83
SNAP29-203ENST00000490458 HMGCRP04035 888 aa20.21■□□□□ 0.83
SNAP29-203ENST00000490458 GCLCP48506 637 aaPredicted RBP20.21■□□□□ 0.83
SNAP29-203ENST00000490458 HMGCS2P54868 508 aa20.21■□□□□ 0.83
SNAP29-203ENST00000490458 RRP1BQ14684 758 aaKnown RBP20.21■□□□□ 0.83
SNAP29-203ENST00000490458 MVPQ14764 893 aaKnown RBP20.21■□□□□ 0.83
SNAP29-203ENST00000490458 C7orf61Q8IZ16 206 aa20.21■□□□□ 0.83
SNAP29-203ENST00000490458 ZNF280CQ8ND82 737 aa20.21■□□□□ 0.83
SNAP29-203ENST00000490458 SLC17A8Q8NDX2 589 aa20.21■□□□□ 0.83
SNAP29-203ENST00000490458 HDAC5Q9UQL6 1122 aa20.21■□□□□ 0.83
SNAP29-203ENST00000490458 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.21■□□□□ 0.83
SNAP29-203ENST00000490458 CDK5RAP2Q96SN8 1893 aa20.21■□□□□ 0.83
SNAP29-203ENST00000490458 TFCP2Q12800 502 aa20.2■□□□□ 0.82
SNAP29-203ENST00000490458 TRIM32Q13049 653 aa20.2■□□□□ 0.82
SNAP29-203ENST00000490458 DIEXFQ68CQ4 756 aaKnown RBP20.2■□□□□ 0.82
SNAP29-203ENST00000490458 PI16Q6UXB8 463 aa20.2■□□□□ 0.82
SNAP29-203ENST00000490458 ANKLE1Q8NAG6 615 aa20.2■□□□□ 0.82
SNAP29-203ENST00000490458 GDF15Q99988 308 aa20.2■□□□□ 0.82
SNAP29-203ENST00000490458 API5Q9BZZ5 524 aaKnown RBP20.2■□□□□ 0.82
SNAP29-203ENST00000490458 AKAP2Q9Y2D5 859 aa20.2■□□□□ 0.82
SNAP29-203ENST00000490458 MAST2Q6P0Q8 1798 aa20.19■□□□□ 0.82
SNAP29-203ENST00000490458 CAP2P40123 477 aa20.19■□□□□ 0.82
SNAP29-203ENST00000490458 PABPC4Q13310 644 aaKnown RBP eCLIP20.19■□□□□ 0.825e-7■□□□□ 8.7
SNAP29-203ENST00000490458 NSUN4Q96CB9 384 aaKnown RBP20.19■□□□□ 0.82
SNAP29-203ENST00000490458 TBC1D2Q9BYX2 928 aa20.19■□□□□ 0.82
SNAP29-203ENST00000490458 ASCC2Q9H1I8 757 aaPredicted RBP20.19■□□□□ 0.82
SNAP29-203ENST00000490458 HMG20BQ9P0W2 317 aa20.19■□□□□ 0.82
SNAP29-203ENST00000490458 GJD2Q9UKL4 321 aa20.19■□□□□ 0.82
SNAP29-203ENST00000490458 ZMYND8Q9ULU4 1186 aaPredicted RBP20.19■□□□□ 0.82
SNAP29-203ENST00000490458 FOCADQ5VW36 1801 aa20.18■□□□□ 0.82
SNAP29-203ENST00000490458 DLL1O00548 723 aa20.18■□□□□ 0.82
SNAP29-203ENST00000490458 SH3D19Q5HYK7 790 aa20.18■□□□□ 0.82
SNAP29-203ENST00000490458 TBC1D9Q6ZT07 1266 aa20.18■□□□□ 0.82
SNAP29-203ENST00000490458 HMX1Q9NP08 348 aaPredicted RBP20.18■□□□□ 0.82
SNAP29-203ENST00000490458 RPTORQ8N122 1335 aa20.18■□□□□ 0.82
SNAP29-203ENST00000490458 USP17L5A8MUK1 530 aa20.17■□□□□ 0.82
SNAP29-203ENST00000490458 SRGAP3O43295 1099 aa20.17■□□□□ 0.82
SNAP29-203ENST00000490458 MAP4K4O95819 1239 aaPredicted RBP20.17■□□□□ 0.82
SNAP29-203ENST00000490458 LDHCP07864 332 aa20.17■□□□□ 0.82
SNAP29-203ENST00000490458 BMP8BP34820 402 aa20.17■□□□□ 0.82
SNAP29-203ENST00000490458 MNX1P50219 401 aaPredicted RBP20.17■□□□□ 0.82
SNAP29-203ENST00000490458 GSTO1P78417 241 aa20.17■□□□□ 0.82
SNAP29-203ENST00000490458 SPATA5Q8NB90 893 aa20.17■□□□□ 0.82
SNAP29-203ENST00000490458 TRIB2Q92519 343 aa20.17■□□□□ 0.82
SNAP29-203ENST00000490458 NEUROD6Q96NK8 337 aa20.17■□□□□ 0.82
SNAP29-203ENST00000490458 MYO5AQ9Y4I1 1855 aaKnown RBP20.16■□□□□ 0.82
SNAP29-203ENST00000490458 TRMT2AQ8IZ69 625 aaKnown RBP20.16■□□□□ 0.82
SNAP29-203ENST00000490458 NBPF3Q9H094 633 aa20.16■□□□□ 0.82
SNAP29-203ENST00000490458 AS3MTQ9HBK9 375 aa20.16■□□□□ 0.82
SNAP29-203ENST00000490458 RAI14Q9P0K7 980 aa20.16■□□□□ 0.82
SNAP29-203ENST00000490458 MORF4L1Q9UBU8 362 aa20.16■□□□□ 0.82
SNAP29-203ENST00000490458 TEX11Q8IYF3 940 aa20.15■□□□□ 0.82
SNAP29-203ENST00000490458 C11orf49Q9H6J7 331 aa20.15■□□□□ 0.82
SNAP29-203ENST00000490458 HERC5Q9UII4 1024 aaKnown RBP20.15■□□□□ 0.82
SNAP29-203ENST00000490458 FRMPD3Q5JV73 1810 aa20.15■□□□□ 0.82
SNAP29-203ENST00000490458 CT47B1P0C2W7 299 aaPredicted RBP20.14■□□□□ 0.81
SNAP29-203ENST00000490458 SYN1P17600 705 aa20.14■□□□□ 0.81
SNAP29-203ENST00000490458 CYP2B6P20813 491 aa20.14■□□□□ 0.81
SNAP29-203ENST00000490458 ARID4AP29374 1257 aaPredicted RBP20.14■□□□□ 0.81
SNAP29-203ENST00000490458 IRX3P78415 501 aaPredicted RBP20.14■□□□□ 0.81
SNAP29-203ENST00000490458 MTX1Q13505 466 aa20.14■□□□□ 0.81
SNAP29-203ENST00000490458 MTMR2Q13614 643 aa20.14■□□□□ 0.81
SNAP29-203ENST00000490458 SH3RF3Q8TEJ3 882 aaPredicted RBP20.14■□□□□ 0.81
SNAP29-203ENST00000490458 OGDHLQ9ULD0 1010 aa20.14■□□□□ 0.81
SNAP29-203ENST00000490458 PEX10O60683 326 aa20.13■□□□□ 0.81
SNAP29-203ENST00000490458 MCAMP43121 646 aa20.13■□□□□ 0.81
SNAP29-203ENST00000490458 GORABQ5T7V8 394 aa20.13■□□□□ 0.81
SNAP29-203ENST00000490458 MAP3K21Q5TCX8 1036 aa20.13■□□□□ 0.81
SNAP29-203ENST00000490458 WDR18Q9BV38 432 aa20.13■□□□□ 0.81
SNAP29-203ENST00000490458 GNAI3P08754 354 aa20.12■□□□□ 0.81
SNAP29-203ENST00000490458 MAGEA10P43363 369 aaPredicted RBP20.12■□□□□ 0.81
SNAP29-203ENST00000490458 TXNRD2Q9NNW7 524 aa20.12■□□□□ 0.81
SNAP29-203ENST00000490458 PI4KBQ9UBF8 816 aa20.12■□□□□ 0.81
SNAP29-203ENST00000490458 PFASO15067 1338 aa20.11■□□□□ 0.81
SNAP29-203ENST00000490458 PRKAR2AP13861 404 aaKnown RBP20.11■□□□□ 0.81
SNAP29-203ENST00000490458 HOXA7P31268 230 aaPredicted RBP20.11■□□□□ 0.81
SNAP29-203ENST00000490458 BACE1P56817 501 aa20.11■□□□□ 0.81
SNAP29-203ENST00000490458 JAG1P78504 1218 aa20.11■□□□□ 0.81
SNAP29-203ENST00000490458 SHROOM1Q2M3G4 852 aaPredicted RBP20.11■□□□□ 0.81
SNAP29-203ENST00000490458 GPR153Q6NV75 609 aa20.11■□□□□ 0.81
SNAP29-203ENST00000490458 SOCS4Q8WXH5 440 aa20.11■□□□□ 0.81
SNAP29-203ENST00000490458 P2RX7Q99572 595 aaKnown RBP20.11■□□□□ 0.81
SNAP29-203ENST00000490458 NUDT12Q9BQG2 462 aa20.11■□□□□ 0.81
SNAP29-203ENST00000490458 DNAJC18Q9H819 358 aa20.11■□□□□ 0.81
SNAP29-203ENST00000490458 TMOD4Q9NZQ9 345 aa20.11■□□□□ 0.81
SNAP29-203ENST00000490458 LRP2BPQ9P2M1 347 aa20.11■□□□□ 0.81
SNAP29-203ENST00000490458 LAMA3Q16787 3333 aa20.1■□□□□ 0.81
SNAP29-203ENST00000490458 ASNSP08243 561 aa20.1■□□□□ 0.81
SNAP29-203ENST00000490458 HERVK_113P62684 666 aa20.1■□□□□ 0.81
SNAP29-203ENST00000490458 Q7L0L9 218 aa20.1■□□□□ 0.81
SNAP29-203ENST00000490458 DEFB123Q8N688 67 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms