RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 BAG3O95817 575 aa11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 GNRH1P01148 92 aa11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 PLCG2P16885 1265 aa11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 LACTBP83111 547 aaPredicted RBP11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 PICALMQ13492 652 aa11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 RRP1BQ14684 758 aaKnown RBP11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 ARHGEF6Q15052 776 aa11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 ZSCAN29Q8IWY8 852 aaPredicted RBP11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 DHX36Q9H2U1 1008 aaKnown RBP11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 PICK1Q9NRD5 415 aa11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 PI4KBQ9UBF8 816 aa11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 EXOC6BQ9Y2D4 811 aa11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 COG6Q9Y2V7 657 aa11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 BCRP11274 1271 aa11.89□□□□□ -0.51
TMEM39A-210ENST00000490099 FASTKD5Q7L8L6 764 aaKnown RBP11.89□□□□□ -0.51
TMEM39A-210ENST00000490099 FOXP4Q8IVH2 680 aaPredicted RBP11.89□□□□□ -0.51
TMEM39A-210ENST00000490099 TEX11Q8IYF3 940 aa11.89□□□□□ -0.51
TMEM39A-210ENST00000490099 HERC5Q9UII4 1024 aaKnown RBP11.89□□□□□ -0.51
TMEM39A-210ENST00000490099 DOCK2Q92608 1830 aa11.88□□□□□ -0.51
TMEM39A-210ENST00000490099 RAB11FIP3O75154 756 aa11.88□□□□□ -0.51
TMEM39A-210ENST00000490099 CTGFP29279 349 aa11.88□□□□□ -0.51
TMEM39A-210ENST00000490099 CAP2P40123 477 aa11.88□□□□□ -0.51
TMEM39A-210ENST00000490099 AACSQ86V21 672 aa11.88□□□□□ -0.51
TMEM39A-210ENST00000490099 CERS3Q8IU89 383 aa11.88□□□□□ -0.51
TMEM39A-210ENST00000490099 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMEM39A-210ENST00000490099 KIF1BPQ96EK5 621 aa11.88□□□□□ -0.51
TMEM39A-210ENST00000490099 TBC1D2Q9BYX2 928 aa11.88□□□□□ -0.51
TMEM39A-210ENST00000490099 CHMP4BQ9H444 224 aaKnown RBP11.88□□□□□ -0.51
TMEM39A-210ENST00000490099 ANTXR1Q9H6X2 564 aa11.88□□□□□ -0.51
TMEM39A-210ENST00000490099 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMEM39A-210ENST00000490099 AATFQ9NY61 560 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMEM39A-210ENST00000490099 FAM196BA6NMK8 535 aa11.87□□□□□ -0.51
TMEM39A-210ENST00000490099 HMMRO75330 724 aa11.87□□□□□ -0.51
TMEM39A-210ENST00000490099 CYP7A1P22680 504 aa11.87□□□□□ -0.51
TMEM39A-210ENST00000490099 PRMT2P55345 433 aa11.87□□□□□ -0.51
TMEM39A-210ENST00000490099 SH3D19Q5HYK7 790 aa11.87□□□□□ -0.51
TMEM39A-210ENST00000490099 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
TMEM39A-210ENST00000490099 TGFBRAP1Q8WUH2 860 aa11.87□□□□□ -0.51
TMEM39A-210ENST00000490099 ZNF333Q96JL9 665 aa11.87□□□□□ -0.51
TMEM39A-210ENST00000490099 WDR18Q9BV38 432 aa11.87□□□□□ -0.51
TMEM39A-210ENST00000490099 ARHGAP39Q9C0H5 1083 aa11.87□□□□□ -0.51
TMEM39A-210ENST00000490099 DNAJC18Q9H819 358 aa11.87□□□□□ -0.51
TMEM39A-210ENST00000490099 CPA4Q9UI42 421 aa11.87□□□□□ -0.51
TMEM39A-210ENST00000490099 PHIPQ8WWQ0 1821 aa11.87□□□□□ -0.51
TMEM39A-210ENST00000490099 FLT1P17948 1338 aa11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 POTEFA5A3E0 1075 aa11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 CYP2C8P10632 490 aa11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 JAG1P78504 1218 aa11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 C20orf194Q5TEA3 1177 aa11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 CLASRPQ8N2M8 674 aaKnown RBP11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 ZNF280CQ8ND82 737 aa11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 TRIM47Q96LD4 638 aa11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 PARK7Q99497 189 aaKnown RBP11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 IL1RAPL2Q9NP60 686 aa11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 GINM1Q9NU53 330 aa11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 PTCH2Q9Y6C5 1203 aa11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 MYO5AQ9Y4I1 1855 aaKnown RBP11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 TNRC18O15417 2968 aaPredicted RBP11.86□□□□□ -0.51
TMEM39A-210ENST00000490099 IDH1O75874 414 aaKnown RBP11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 PSMC4P43686 418 aa11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 DYNLL1P63167 89 aaKnown RBP11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 MAP3K12Q12852 859 aa11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 SPP2Q13103 211 aa11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 KIF22Q14807 665 aa11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 CCDC84Q86UT8 332 aaPredicted RBP11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 IFNLR1Q8IU57 520 aaPredicted RBP11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 MAPKAPK5Q8IW41 473 aa11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 MAGEB6Q8N7X4 407 aa11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 PROCA1Q8NCQ7 364 aaPredicted RBP11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 RIOK1Q9BRS2 568 aaKnown RBP11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 SRRDQ9UH36 339 aa11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 PALD1Q9ULE6 856 aa11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 AGTPBP1Q9UPW5 1226 aa11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 NDUFB9Q9Y6M9 179 aa11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 PTPRFP10586 1907 aa11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 DOCK1Q14185 1865 aa11.85□□□□□ -0.51
TMEM39A-210ENST00000490099 MAST2Q6P0Q8 1798 aa11.84□□□□□ -0.51
TMEM39A-210ENST00000490099 SIPA1L1O43166 1804 aa11.84□□□□□ -0.51
TMEM39A-210ENST00000490099 TCRBV5S4A2TA0A5A2 114 aa11.84□□□□□ -0.51
TMEM39A-210ENST00000490099 TRIM75PA6NK02 468 aa11.84□□□□□ -0.51
TMEM39A-210ENST00000490099 USP17L5A8MUK1 530 aa11.84□□□□□ -0.51
TMEM39A-210ENST00000490099 ASNSP08243 561 aa11.84□□□□□ -0.51
TMEM39A-210ENST00000490099 PRKAR2AP13861 404 aaKnown RBP11.84□□□□□ -0.51
TMEM39A-210ENST00000490099 ATP5JP18859 108 aa11.84□□□□□ -0.51
TMEM39A-210ENST00000490099 TTF1Q15361 905 aaPredicted RBP11.84□□□□□ -0.51
TMEM39A-210ENST00000490099 TATDN1Q6P1N9 297 aa11.84□□□□□ -0.51
TMEM39A-210ENST00000490099 EHD4Q9H223 541 aa11.84□□□□□ -0.51
TMEM39A-210ENST00000490099 OSBPP22059 807 aa11.83□□□□□ -0.52
TMEM39A-210ENST00000490099 HOXD10P28358 340 aa11.83□□□□□ -0.52
TMEM39A-210ENST00000490099 MNX1P50219 401 aaPredicted RBP11.83□□□□□ -0.52
TMEM39A-210ENST00000490099 TREML2Q5T2D2 321 aa11.83□□□□□ -0.52
TMEM39A-210ENST00000490099 NBPF11Q86T75 865 aa11.83□□□□□ -0.52
TMEM39A-210ENST00000490099 FOCADQ5VW36 1801 aa11.83□□□□□ -0.52
TMEM39A-210ENST00000490099 CDK5RAP2Q96SN8 1893 aa11.83□□□□□ -0.52
TMEM39A-210ENST00000490099 C19orf81C9J6K1 198 aa11.82□□□□□ -0.52
TMEM39A-210ENST00000490099 IFIT2P09913 472 aaKnown RBP11.82□□□□□ -0.52
TMEM39A-210ENST00000490099 PDE6AP16499 860 aa11.82□□□□□ -0.52
TMEM39A-210ENST00000490099 HOXA7P31268 230 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms