RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 GOLIM4O00461 696 aa16.38■□□□□ 0.21
LMO4-203ENST00000489303 TBC1D12O60347 775 aa16.38■□□□□ 0.21
LMO4-203ENST00000489303 ATP5JP18859 108 aa16.38■□□□□ 0.21
LMO4-203ENST00000489303 MOGSQ13724 837 aa16.38■□□□□ 0.21
LMO4-203ENST00000489303 PRPF38BQ5VTL8 546 aaKnown RBP16.38■□□□□ 0.21
LMO4-203ENST00000489303 ADGRA1Q86SQ6 560 aa16.38■□□□□ 0.21
LMO4-203ENST00000489303 TGFBRAP1Q8WUH2 860 aa16.38■□□□□ 0.21
LMO4-203ENST00000489303 ARMC5Q96C12 935 aa16.38■□□□□ 0.21
LMO4-203ENST00000489303 TRIM34Q9BYJ4 488 aa16.38■□□□□ 0.21
LMO4-203ENST00000489303 BOLA2Q9H3K6 86 aa16.38■□□□□ 0.21
LMO4-203ENST00000489303 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.38■□□□□ 0.21
LMO4-203ENST00000489303 ZBTB47Q9UFB7 747 aaPredicted RBP16.38■□□□□ 0.21
LMO4-203ENST00000489303 ATRNL1Q5VV63 1379 aa16.38■□□□□ 0.21
LMO4-203ENST00000489303 SMARCA5O60264 1052 aaPredicted RBP16.37■□□□□ 0.21
LMO4-203ENST00000489303 TLR2O60603 784 aa16.37■□□□□ 0.21
LMO4-203ENST00000489303 USP5P45974 858 aa16.37■□□□□ 0.21
LMO4-203ENST00000489303 MAP3K10Q02779 954 aa16.37■□□□□ 0.21
LMO4-203ENST00000489303 AAMPQ13685 434 aa16.37■□□□□ 0.21
LMO4-203ENST00000489303 SLC9C2Q5TAH2 1124 aa16.37■□□□□ 0.21
LMO4-203ENST00000489303 MAPKAPK5Q8IW41 473 aa16.37■□□□□ 0.21
LMO4-203ENST00000489303 SCYL3Q8IZE3 742 aa16.37■□□□□ 0.21
LMO4-203ENST00000489303 MIGA1Q8NAN2 632 aa16.37■□□□□ 0.21
LMO4-203ENST00000489303 PAG1Q9NWQ8 432 aa16.37■□□□□ 0.21
LMO4-203ENST00000489303 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.37■□□□□ 0.21
LMO4-203ENST00000489303 PI4KBQ9UBF8 816 aa16.37■□□□□ 0.21
LMO4-203ENST00000489303 CPA4Q9UI42 421 aa16.37■□□□□ 0.21
LMO4-203ENST00000489303 PCDHB15Q9Y5E8 787 aa16.37■□□□□ 0.21
LMO4-203ENST00000489303 COL2A1P02458 1487 aaPredicted RBP16.36■□□□□ 0.21
LMO4-203ENST00000489303 PHF20L1A8MW92 1017 aa16.36■□□□□ 0.21
LMO4-203ENST00000489303 CTNND1O60716 968 aaKnown RBP16.36■□□□□ 0.21
LMO4-203ENST00000489303 HLA-DOAP06340 250 aa16.36■□□□□ 0.21
LMO4-203ENST00000489303 DYNLL1P63167 89 aaKnown RBP16.36■□□□□ 0.21
LMO4-203ENST00000489303 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.36■□□□□ 0.21
LMO4-203ENST00000489303 ECHDC1Q9NTX5 307 aa16.36■□□□□ 0.21
LMO4-203ENST00000489303 HERC5Q9UII4 1024 aaKnown RBP16.36■□□□□ 0.21
LMO4-203ENST00000489303 MAGEB6P1A0A0J9YX57 407 aa16.35■□□□□ 0.21
LMO4-203ENST00000489303 PDE6AP16499 860 aa16.35■□□□□ 0.21
LMO4-203ENST00000489303 LACTBP83111 547 aaPredicted RBP16.35■□□□□ 0.21
LMO4-203ENST00000489303 CCDC84Q86UT8 332 aaPredicted RBP16.35■□□□□ 0.21
LMO4-203ENST00000489303 SH3TC2Q8TF17 1288 aa16.35■□□□□ 0.21
LMO4-203ENST00000489303 ZNF333Q96JL9 665 aa16.35■□□□□ 0.21
LMO4-203ENST00000489303 HAUS7Q99871 368 aa16.35■□□□□ 0.21
LMO4-203ENST00000489303 FLT1P17948 1338 aa16.35■□□□□ 0.21
LMO4-203ENST00000489303 MAST2Q6P0Q8 1798 aa16.35■□□□□ 0.21
LMO4-203ENST00000489303 RBBP6Q7Z6E9 1792 aaKnown RBP16.35■□□□□ 0.21
LMO4-203ENST00000489303 DOCK2Q92608 1830 aa16.34■□□□□ 0.21
LMO4-203ENST00000489303 PDHXO00330 501 aa16.34■□□□□ 0.21
LMO4-203ENST00000489303 CXCL11O14625 94 aa16.34■□□□□ 0.21
LMO4-203ENST00000489303 ZSCAN25Q6NSZ9 544 aa16.34■□□□□ 0.21
LMO4-203ENST00000489303 GPAT2Q6NUI2 795 aa16.34■□□□□ 0.21
LMO4-203ENST00000489303 C17orf99Q6UX52 265 aa16.34■□□□□ 0.21
LMO4-203ENST00000489303 FOXP4Q8IVH2 680 aaPredicted RBP16.34■□□□□ 0.21
LMO4-203ENST00000489303 CRACR2BQ8N4Y2 399 aaPredicted RBP16.34■□□□□ 0.21
LMO4-203ENST00000489303 ZCCHC17Q9NP64 241 aaKnown RBP16.34■□□□□ 0.21
LMO4-203ENST00000489303 KCNH4Q9UQ05 1017 aa16.34■□□□□ 0.21
LMO4-203ENST00000489303 ZHX2Q9Y6X8 837 aa16.34■□□□□ 0.21
LMO4-203ENST00000489303 ADGRA2Q96PE1 1338 aa16.34■□□□□ 0.21
LMO4-203ENST00000489303 KIAA0100Q14667 2235 aaKnown RBP16.34■□□□□ 0.21
LMO4-203ENST00000489303 PTPRAP18433 802 aa16.33■□□□□ 0.2
LMO4-203ENST00000489303 CRNKL1Q9BZJ0 848 aaKnown RBP16.33■□□□□ 0.2
LMO4-203ENST00000489303 ZNF532Q9HCE3 1301 aa16.33■□□□□ 0.2
LMO4-203ENST00000489303 FAM196BA6NMK8 535 aa16.32■□□□□ 0.2
LMO4-203ENST00000489303 CYP2C8P10632 490 aa16.32■□□□□ 0.2
LMO4-203ENST00000489303 SLC9C1Q4G0N8 1177 aa16.32■□□□□ 0.2
LMO4-203ENST00000489303 ANKRD23Q86SG2 305 aa16.32■□□□□ 0.2
LMO4-203ENST00000489303 TTC6Q86TZ1 520 aa16.32■□□□□ 0.2
LMO4-203ENST00000489303 EDC3Q96F86 508 aaKnown RBP16.32■□□□□ 0.2
LMO4-203ENST00000489303 TRIM47Q96LD4 638 aa16.32■□□□□ 0.2
LMO4-203ENST00000489303 TBC1D2Q9BYX2 928 aa16.32■□□□□ 0.2
LMO4-203ENST00000489303 SAP30BPQ9UHR5 308 aaKnown RBP16.32■□□□□ 0.2
LMO4-203ENST00000489303 PALD1Q9ULE6 856 aa16.32■□□□□ 0.2
LMO4-203ENST00000489303 ERC2O15083 957 aa16.31■□□□□ 0.2
LMO4-203ENST00000489303 FASTKD5Q7L8L6 764 aaKnown RBP16.31■□□□□ 0.2
LMO4-203ENST00000489303 GCC1Q96CN9 775 aa16.31■□□□□ 0.2
LMO4-203ENST00000489303 RIOK1Q9BRS2 568 aaKnown RBP16.31■□□□□ 0.2
LMO4-203ENST00000489303 ADD2P35612 726 aa16.3■□□□□ 0.2
LMO4-203ENST00000489303 CAP2P40123 477 aa16.3■□□□□ 0.2
LMO4-203ENST00000489303 HDAC1Q13547 482 aaPredicted RBP16.3■□□□□ 0.2
LMO4-203ENST00000489303 ARHGEF6Q15052 776 aa16.3■□□□□ 0.2
LMO4-203ENST00000489303 MTFR1Q15390 333 aa16.3■□□□□ 0.2
LMO4-203ENST00000489303 LRRFIP1Q32MZ4 808 aaKnown RBP16.3■□□□□ 0.2
LMO4-203ENST00000489303 AS3MTQ9HBK9 375 aa16.3■□□□□ 0.2
LMO4-203ENST00000489303 AFG3L2Q9Y4W6 797 aa16.3■□□□□ 0.2
LMO4-203ENST00000489303 PHIPQ8WWQ0 1821 aa16.3■□□□□ 0.2
LMO4-203ENST00000489303 TTC41PQ6P2S7 1318 aa16.29■□□□□ 0.2
LMO4-203ENST00000489303 TCRBV5S4A2TA0A5A2 114 aa16.29■□□□□ 0.2
LMO4-203ENST00000489303 POLR3DP05423 398 aaPredicted RBP16.29■□□□□ 0.2
LMO4-203ENST00000489303 PSMC4P43686 418 aa16.29■□□□□ 0.2
LMO4-203ENST00000489303 RRP1BQ14684 758 aaKnown RBP16.29■□□□□ 0.2
LMO4-203ENST00000489303 UBE3CQ15386 1083 aa16.29■□□□□ 0.2
LMO4-203ENST00000489303 ANKRD45Q5TZF3 282 aa16.29■□□□□ 0.2
LMO4-203ENST00000489303 DDRGK1Q96HY6 314 aa16.29■□□□□ 0.2
LMO4-203ENST00000489303 RWDD1Q9H446 243 aaPredicted RBP16.29■□□□□ 0.2
LMO4-203ENST00000489303 GINM1Q9NU53 330 aa16.29■□□□□ 0.2
LMO4-203ENST00000489303 A0A0G2JLL6 359 aaPredicted RBP16.28■□□□□ 0.2
LMO4-203ENST00000489303 TRIM75PA6NK02 468 aa16.28■□□□□ 0.2
LMO4-203ENST00000489303 USP17L5A8MUK1 530 aa16.28■□□□□ 0.2
LMO4-203ENST00000489303 ASNSP08243 561 aa16.28■□□□□ 0.2
LMO4-203ENST00000489303 OSBPP22059 807 aa16.28■□□□□ 0.2
LMO4-203ENST00000489303 KIF22Q14807 665 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms