RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 PRIMPOLQ96LW4 560 aa6.83□□□□□ -1.32
ATG4A-208ENST00000489247 METTL22Q9BUU2 404 aaPredicted RBP6.83□□□□□ -1.32
ATG4A-208ENST00000489247 MAP3K2Q9Y2U5 619 aa6.83□□□□□ -1.32
ATG4A-208ENST00000489247 THRAP3Q9Y2W1 955 aaKnown RBP6.83□□□□□ -1.32
ATG4A-208ENST00000489247 HCN4Q9Y3Q4 1203 aa6.83□□□□□ -1.32
ATG4A-208ENST00000489247 LRRFIP2Q9Y608 721 aaKnown RBP6.83□□□□□ -1.32
ATG4A-208ENST00000489247 IVNS1ABPQ9Y6Y0 642 aa6.83□□□□□ -1.32
ATG4A-208ENST00000489247 SLIT2O94813 1529 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 GRM8O00222 908 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 CDC45O75419 566 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 IGKV5-2P06315 115 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 NBPF7P0C2Y1 421 aaPredicted RBP6.82□□□□□ -1.32
ATG4A-208ENST00000489247 ATP2B4P23634 1241 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 SCNN1AP37088 669 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 EVA1CP58658 441 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 SLC39A6Q13433 755 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 SWI5Q1ZZU3 235 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 HSP90AB4PQ58FF6 505 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 RNFT1Q5M7Z0 435 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 LRRCC1Q9C099 1032 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 NUCKS1Q9H1E3 243 aaKnown RBP6.82□□□□□ -1.32
ATG4A-208ENST00000489247 BTG4Q9NY30 223 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 USP16Q9Y5T5 823 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 LAMB4A4D0S4 1761 aa6.82□□□□□ -1.32
ATG4A-208ENST00000489247 C5P01031 1676 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 NEURL1BA8MQ27 555 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 EPB41L2O43491 1005 aaKnown RBP6.81□□□□□ -1.32
ATG4A-208ENST00000489247 ANXA1P04083 346 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 WEE1P30291 646 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 PDE1AP54750 535 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 UBAP2LQ14157 1087 aaKnown RBP6.81□□□□□ -1.32
ATG4A-208ENST00000489247 POTEAQ6S8J7 498 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 PPP1R42Q7Z4L9 355 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 NPM2Q86SE8 214 aaKnown RBP6.81□□□□□ -1.32
ATG4A-208ENST00000489247 PLBD2Q8NHP8 589 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 XAGE3Q8WTP9 111 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 C7orf43Q8WVR3 580 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 IL17RAQ96F46 866 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 KAZALD1Q96I82 304 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 ZIC5Q96T25 663 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 C2orf49Q9BVC5 232 aaPredicted RBP6.81□□□□□ -1.32
ATG4A-208ENST00000489247 TEX13AQ9BXU3 409 aaPredicted RBP6.81□□□□□ -1.32
ATG4A-208ENST00000489247 C22orf23Q9BZE7 217 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 ZDHHC3Q9NYG2 299 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 BCL9O00512 1426 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 NRAPQ86VF7 1730 aa6.81□□□□□ -1.32
ATG4A-208ENST00000489247 SPATA31A1Q5TZJ5 1347 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 A0A1W2PNR3 127 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 PATL2C9JE40 543 aaKnown RBP6.8□□□□□ -1.32
ATG4A-208ENST00000489247 H7C1W4 665 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 TOM1O60784 492 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 IGFBP4P22692 258 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 CASP7P55210 303 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 TRIM28Q13263 835 aaKnown RBP6.8□□□□□ -1.32
ATG4A-208ENST00000489247 GAS6Q14393 721 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 GCKRQ14397 625 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 RABL6Q3YEC7 729 aaPredicted RBP6.8□□□□□ -1.32
ATG4A-208ENST00000489247 ARSJQ5FYB0 599 aaPredicted RBP6.8□□□□□ -1.32
ATG4A-208ENST00000489247 COPS6Q7L5N1 327 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 PGBD3Q8N328 593 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 OTUD7AQ8TE49 926 aaPredicted RBP6.8□□□□□ -1.32
ATG4A-208ENST00000489247 SNX21Q969T3 373 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 KIF1BPQ96EK5 621 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 NGLY1Q96IV0 654 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 PHACTR1Q9C0D0 580 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 CRISPLD1Q9H336 500 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 TOGARAM1Q9Y4F4 1720 aa6.8□□□□□ -1.32
ATG4A-208ENST00000489247 CICQ96RK0 1608 aaPredicted RBP6.79□□□□□ -1.32
ATG4A-208ENST00000489247 SPATA31A5Q5VU36 1347 aa6.79□□□□□ -1.32
ATG4A-208ENST00000489247 SPATA31A7Q8IWB4 1347 aa6.79□□□□□ -1.32
ATG4A-208ENST00000489247 SRGAP3O43295 1099 aa6.79□□□□□ -1.32
ATG4A-208ENST00000489247 SDSP20132 328 aa6.79□□□□□ -1.32
ATG4A-208ENST00000489247 NEXNQ0ZGT2 675 aa6.79□□□□□ -1.32
ATG4A-208ENST00000489247 BECN1Q14457 450 aa6.79□□□□□ -1.32
ATG4A-208ENST00000489247 OCLNQ16625 522 aa6.79□□□□□ -1.32
ATG4A-208ENST00000489247 ERC1Q8IUD2 1116 aa6.79□□□□□ -1.32
ATG4A-208ENST00000489247 C16orf71Q8IYS4 520 aaPredicted RBP6.79□□□□□ -1.32
ATG4A-208ENST00000489247 RHPN1Q8TCX5 695 aa6.79□□□□□ -1.32
ATG4A-208ENST00000489247 STRN4Q9NRL3 753 aa6.79□□□□□ -1.32
ATG4A-208ENST00000489247 TMOD3Q9NYL9 352 aa6.79□□□□□ -1.32
ATG4A-208ENST00000489247 C9orf78Q9NZ63 289 aaPredicted RBP6.79□□□□□ -1.32
ATG4A-208ENST00000489247 HCN2Q9UL51 889 aa6.79□□□□□ -1.32
ATG4A-208ENST00000489247 EXOC6BQ9Y2D4 811 aa6.79□□□□□ -1.32
ATG4A-208ENST00000489247 TTC41PQ6P2S7 1318 aa6.78□□□□□ -1.32
ATG4A-208ENST00000489247 SMARCA5O60264 1052 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-208ENST00000489247 MX1P20591 662 aa6.78□□□□□ -1.32
ATG4A-208ENST00000489247 HIRAP54198 1017 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-208ENST00000489247 CWF19L2Q2TBE0 894 aaKnown RBP6.78□□□□□ -1.32
ATG4A-208ENST00000489247 TMCO4Q5TGY1 634 aa6.78□□□□□ -1.32
ATG4A-208ENST00000489247 BICDL1Q6ZP65 573 aa6.78□□□□□ -1.32
ATG4A-208ENST00000489247 ALDH16A1Q8IZ83 802 aa6.78□□□□□ -1.32
ATG4A-208ENST00000489247 C1orf216Q8TAB5 229 aa6.78□□□□□ -1.32
ATG4A-208ENST00000489247 PIGBQ92521 554 aa6.78□□□□□ -1.32
ATG4A-208ENST00000489247 SUCLG2Q96I99 432 aa6.78□□□□□ -1.32
ATG4A-208ENST00000489247 GMCL1Q96IK5 515 aa6.78□□□□□ -1.32
ATG4A-208ENST00000489247 KIF2CQ99661 725 aa6.78□□□□□ -1.32
ATG4A-208ENST00000489247 COPRSQ9NQ92 184 aa6.78□□□□□ -1.32
ATG4A-208ENST00000489247 ATG3Q9NT62 314 aa6.78□□□□□ -1.32
ATG4A-208ENST00000489247 CXXC1Q9P0U4 656 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-208ENST00000489247 CHMP3Q9Y3E7 222 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms