RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 FLT1P17948 1338 aa28.18■■■□□ 2.1
CUL4A-209ENST00000488558 RAB11FIP3O75154 756 aa28.17■■■□□ 2.1
CUL4A-209ENST00000488558 IDH1O75874 414 aaKnown RBP28.17■■■□□ 2.1
CUL4A-209ENST00000488558 LACTBP83111 547 aaPredicted RBP28.17■■■□□ 2.1
CUL4A-209ENST00000488558 PARK7Q99497 189 aaKnown RBP28.17■■■□□ 2.1
CUL4A-209ENST00000488558 TBC1D2Q9BYX2 928 aa28.17■■■□□ 2.1
CUL4A-209ENST00000488558 PI4KBQ9UBF8 816 aa28.17■■■□□ 2.1
CUL4A-209ENST00000488558 SLC45A1Q9Y2W3 748 aa28.17■■■□□ 2.1
CUL4A-209ENST00000488558 LOC285556D6RIA3 1793 aa28.16■■■□□ 2.1
CUL4A-209ENST00000488558 ZSWIM8A7E2V4 1837 aa28.16■■■□□ 2.1
CUL4A-209ENST00000488558 GNRH1P01148 92 aa28.16■■■□□ 2.1
CUL4A-209ENST00000488558 CYP7A1P22680 504 aa28.16■■■□□ 2.1
CUL4A-209ENST00000488558 KIF22Q14807 665 aa28.16■■■□□ 2.1
CUL4A-209ENST00000488558 GPAT2Q6NUI2 795 aa28.16■■■□□ 2.1
CUL4A-209ENST00000488558 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.16■■■□□ 2.1
CUL4A-209ENST00000488558 FAM196BA6NMK8 535 aa28.15■■■□□ 2.1
CUL4A-209ENST00000488558 MAP3K12Q12852 859 aa28.15■■■□□ 2.1
CUL4A-209ENST00000488558 ARMC5Q96C12 935 aa28.15■■■□□ 2.1
CUL4A-209ENST00000488558 TTF1Q15361 905 aaPredicted RBP28.14■■■□□ 2.1
CUL4A-209ENST00000488558 METTL16Q86W50 562 aaKnown RBP28.14■■■□□ 2.1
CUL4A-209ENST00000488558 TGFBRAP1Q8WUH2 860 aa28.14■■■□□ 2.1
CUL4A-209ENST00000488558 CAP2P40123 477 aa28.13■■■□□ 2.09
CUL4A-209ENST00000488558 C20orf194Q5TEA3 1177 aa28.13■■■□□ 2.09
CUL4A-209ENST00000488558 MAPKAPK5Q8IW41 473 aa28.13■■■□□ 2.09
CUL4A-209ENST00000488558 MAGEB6Q8N7X4 407 aa28.13■■■□□ 2.09
CUL4A-209ENST00000488558 ANTXR1Q9H6X2 564 aa28.13■■■□□ 2.09
CUL4A-209ENST00000488558 NDUFB9Q9Y6M9 179 aa28.13■■■□□ 2.09
CUL4A-209ENST00000488558 TNRC18O15417 2968 aaPredicted RBP28.13■■■□□ 2.09
CUL4A-209ENST00000488558 MYH1P12882 1939 aa28.12■■■□□ 2.09
CUL4A-209ENST00000488558 IFIT2P09913 472 aaKnown RBP28.12■■■□□ 2.09
CUL4A-209ENST00000488558 PRMT2P55345 433 aa28.12■■■□□ 2.09
CUL4A-209ENST00000488558 CPA4Q9UI42 421 aa28.12■■■□□ 2.09
CUL4A-209ENST00000488558 FOXP4Q8IVH2 680 aaPredicted RBP28.11■■■□□ 2.09
CUL4A-209ENST00000488558 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.11■■■□□ 2.09
CUL4A-209ENST00000488558 DDX60LQ5H9U9 1706 aaKnown RBP28.11■■■□□ 2.09
CUL4A-209ENST00000488558 TRIM75PA6NK02 468 aa28.1■■■□□ 2.09
CUL4A-209ENST00000488558 APBB1O00213 710 aa28.1■■■□□ 2.09
CUL4A-209ENST00000488558 DYNLL1P63167 89 aaKnown RBP28.1■■■□□ 2.09
CUL4A-209ENST00000488558 GADL1Q6ZQY3 521 aa28.1■■■□□ 2.09
CUL4A-209ENST00000488558 ARHGAP39Q9C0H5 1083 aa28.1■■■□□ 2.09
CUL4A-209ENST00000488558 HLA-DOAP06340 250 aa28.09■■■□□ 2.09
CUL4A-209ENST00000488558 BCRP11274 1271 aa28.09■■■□□ 2.09
CUL4A-209ENST00000488558 RRP1BQ14684 758 aaKnown RBP28.09■■■□□ 2.09
CUL4A-209ENST00000488558 MIGA1Q8NAN2 632 aa28.09■■■□□ 2.09
CUL4A-209ENST00000488558 PROCA1Q8NCQ7 364 aaPredicted RBP28.09■■■□□ 2.09
CUL4A-209ENST00000488558 ZNF280CQ8ND82 737 aa28.09■■■□□ 2.09
CUL4A-209ENST00000488558 GINM1Q9NU53 330 aa28.09■■■□□ 2.09
CUL4A-209ENST00000488558 AGTPBP1Q9UPW5 1226 aa28.09■■■□□ 2.09
CUL4A-209ENST00000488558 PTCH2Q9Y6C5 1203 aa28.09■■■□□ 2.09
CUL4A-209ENST00000488558 MGAMO43451 1857 aa28.08■■■□□ 2.09
CUL4A-209ENST00000488558 USP17L5A8MUK1 530 aa28.08■■■□□ 2.09
CUL4A-209ENST00000488558 CYP2C8P10632 490 aa28.08■■■□□ 2.09
CUL4A-209ENST00000488558 CCDC84Q86UT8 332 aaPredicted RBP28.08■■■□□ 2.09
CUL4A-209ENST00000488558 DNAJC18Q9H819 358 aa28.08■■■□□ 2.09
CUL4A-209ENST00000488558 PALD1Q9ULE6 856 aa28.08■■■□□ 2.09
CUL4A-209ENST00000488558 ASNSP08243 561 aa28.07■■■□□ 2.08
CUL4A-209ENST00000488558 CRACR2BQ8N4Y2 399 aaPredicted RBP28.07■■■□□ 2.08
CUL4A-209ENST00000488558 TRIM34Q9BYJ4 488 aa28.07■■■□□ 2.08
CUL4A-209ENST00000488558 AS3MTQ9HBK9 375 aa28.07■■■□□ 2.08
CUL4A-209ENST00000488558 NAV1Q8NEY1 1877 aa28.06■■■□□ 2.08
CUL4A-209ENST00000488558 SLC9C1Q4G0N8 1177 aa28.06■■■□□ 2.08
CUL4A-209ENST00000488558 NBPF11Q86T75 865 aa28.06■■■□□ 2.08
CUL4A-209ENST00000488558 ZNF333Q96JL9 665 aa28.06■■■□□ 2.08
CUL4A-209ENST00000488558 RIOK1Q9BRS2 568 aaKnown RBP28.06■■■□□ 2.08
CUL4A-209ENST00000488558 USP5P45974 858 aa28.05■■■□□ 2.08
CUL4A-209ENST00000488558 SPP2Q13103 211 aa28.05■■■□□ 2.08
CUL4A-209ENST00000488558 TRIM47Q96LD4 638 aa28.05■■■□□ 2.08
CUL4A-209ENST00000488558 WDR18Q9BV38 432 aa28.05■■■□□ 2.08
CUL4A-209ENST00000488558 PNMA3Q9UL41 463 aa28.05■■■□□ 2.08
CUL4A-209ENST00000488558 PDE6AP16499 860 aa28.04■■■□□ 2.08
CUL4A-209ENST00000488558 CTGFP29279 349 aa28.04■■■□□ 2.08
CUL4A-209ENST00000488558 PSMC4P43686 418 aa28.04■■■□□ 2.08
CUL4A-209ENST00000488558 SH3D19Q5HYK7 790 aa28.04■■■□□ 2.08
CUL4A-209ENST00000488558 LRRCC1Q9C099 1032 aa28.04■■■□□ 2.08
CUL4A-209ENST00000488558 EHD4Q9H223 541 aa28.04■■■□□ 2.08
CUL4A-209ENST00000488558 SRRDQ9UH36 339 aa28.04■■■□□ 2.08
CUL4A-209ENST00000488558 SAP30BPQ9UHR5 308 aaKnown RBP28.04■■■□□ 2.08
CUL4A-209ENST00000488558 GOLIM4O00461 696 aa28.03■■■□□ 2.08
CUL4A-209ENST00000488558 ATP5JP18859 108 aa28.03■■■□□ 2.08
CUL4A-209ENST00000488558 HOXD10P28358 340 aa28.03■■■□□ 2.08
CUL4A-209ENST00000488558 PABPC4Q13310 644 aaKnown RBP eCLIP28.03■■■□□ 2.08
CUL4A-209ENST00000488558 SLC9C2Q5TAH2 1124 aa28.03■■■□□ 2.08
CUL4A-209ENST00000488558 SMCR8Q8TEV9 937 aaPredicted RBP28.03■■■□□ 2.08
CUL4A-209ENST00000488558 DNAJC2Q99543 621 aaKnown RBP28.03■■■□□ 2.08
CUL4A-209ENST00000488558 MAGEB6P1A0A0J9YX57 407 aa28.02■■■□□ 2.08
CUL4A-209ENST00000488558 FCGRTP55899 365 aa28.02■■■□□ 2.08
CUL4A-209ENST00000488558 TREML2Q5T2D2 321 aa28.02■■■□□ 2.08
CUL4A-209ENST00000488558 MYH7P12883 1935 aa28.02■■■□□ 2.08
CUL4A-209ENST00000488558 PDE4DIPQ5VU43 2346 aa28.01■■■□□ 2.07
CUL4A-209ENST00000488558 FMNL1O95466 1100 aaPredicted RBP28.01■■■□□ 2.07
CUL4A-209ENST00000488558 OSBPP22059 807 aa28.01■■■□□ 2.07
CUL4A-209ENST00000488558 HMGCS2P54868 508 aa28.01■■■□□ 2.07
CUL4A-209ENST00000488558 TTC6Q86TZ1 520 aa28.01■■■□□ 2.07
CUL4A-209ENST00000488558 ZBTB21Q9ULJ3 1066 aa28.01■■■□□ 2.07
CUL4A-209ENST00000488558 CENPFP49454 3210 aa28.01■■■□□ 2.07
CUL4A-209ENST00000488558 ZNF532Q9HCE3 1301 aa28■■■□□ 2.07
CUL4A-209ENST00000488558 TCRBV5S4A2TA0A5A2 114 aa28■■■□□ 2.07
CUL4A-209ENST00000488558 PAG1Q9NWQ8 432 aa28■■■□□ 2.07
CUL4A-209ENST00000488558 SERPINB13Q9UIV8 391 aa28■■■□□ 2.07
CUL4A-209ENST00000488558 MYPNQ86TC9 1320 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms