RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 FAM135BQ49AJ0 1406 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 SMARCA5O60264 1052 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 CPP00450 1065 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 RHOQP17081 205 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 MX2P20592 715 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 GSCP56915 257 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 EXOSC9Q06265 439 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 ZSCAN26Q16670 478 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 CASC1Q6TDU7 716 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 RGL4Q8IZJ4 473 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 CNPY4Q8N129 248 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 FBXO18Q8NFZ0 1043 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 NEK11Q8NG66 645 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 IFT43Q96FT9 208 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 IFT57Q9NWB7 429 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 RRP7AQ9Y3A4 280 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 JRKLQ9Y4A0 524 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 LRRFIP2Q9Y608 721 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 ABCA9Q8IUA7 1624 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 ABCC4O15439 1325 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 NSD2O96028 1365 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 PTPRTO14522 1441 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 RPS6KA5O75582 802 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 CCDC192P0DO97 292 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 MAGEA9P43362 315 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 SATB1Q01826 763 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 LRMPQ12912 555 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 MLECQ14165 292 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 WDR44Q5JSH3 913 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 ZMYM1Q5SVZ6 1142 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 C1orf53Q5VUE5 145 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 KRBA2Q6ZNG9 492 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 CCDC186Q7Z3E2 898 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 SIRT2Q8IXJ6 389 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 ZNF280CQ8ND82 737 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 TDRD7Q8NHU6 1098 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 GIPC2Q8TF65 315 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 EXOC4Q96A65 974 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 GAS2L1Q99501 681 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 MED4Q9NPJ6 270 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 PHF24Q9UPV7 400 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 RRP15Q9Y3B9 282 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 IFT172Q9UG01 1749 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 ASXL2Q76L83 1435 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 EFCAB6Q5THR3 1501 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 GLI2P10070 1586 aa5.57□□□□□ -1.52
CDC42BPA-213ENST00000488131 MAP3K4Q9Y6R4 1608 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 KRBA1A5PL33 1030 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 ERC2O15083 957 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 EPB41L2O43491 1005 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 TUBB4AP04350 444 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 ATP4AP20648 1035 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 ZNF75DP51815 510 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 DSC3Q14574 896 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 DBN1Q16643 649 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 TPD52L1Q16890 204 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 RGL3Q3MIN7 710 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 TTC31Q49AM3 519 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 CCDC93Q567U6 631 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 GNASQ5JWF2 1037 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 NBPF10Q6P3W6 841 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 RPAINQ86UA6 219 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 C10orf67Q8IYJ2 551 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 SPC24Q8NBT2 197 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 CCDC191Q8NCU4 936 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 MNS1Q8NEH6 495 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 RTF1Q92541 710 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 SMARCE1Q969G3 411 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 AIDAQ96BJ3 306 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 SRCIN1Q9C0H9 1055 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 LCMT1Q9UIC8 334 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 MKL2Q9ULH7 1088 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 SPAG9O60271 1321 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 NSD3Q9BZ95 1437 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 ATP10DQ9P241 1426 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 SETBP1Q9Y6X0 1596 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 TREHO43280 583 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 P4HBP07237 508 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 IVLP07476 585 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 KCNJ6P48051 423 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 GYS2P54840 703 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 SARM1Q6SZW1 724 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 RBM43Q6ZSC3 357 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 CCDC91Q7Z6B0 441 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 EGFL6Q8IUX8 553 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 CACTINQ8WUQ7 758 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 TSR2Q969E8 191 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 GTF3C6Q969F1 213 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 GTPBP3Q969Y2 492 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 ACDQ96AP0 544 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 CEP89Q96ST8 783 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 FAM129BQ96TA1 746 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 CFHR5Q9BXR6 569 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 DCTPP1Q9H773 170 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 ARGLU1Q9NWB6 273 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 DMGDHQ9UI17 866 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 POLIQ9UNA4 740 aa5.56□□□□□ -1.52
CDC42BPA-213ENST00000488131 MAGI1Q96QZ7 1491 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 ADGRB1O14514 1584 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 HECW2Q9P2P5 1572 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms