RNA–Protein interactions for RNA: ENST00000488069.5

CCDC12-205, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-205ENST00000488069 FLT1P17948 1338 aa22.06■■□□□ 1.12
CCDC12-205ENST00000488069 A0A0G2JLL6 359 aaPredicted RBP22.05■■□□□ 1.12
CCDC12-205ENST00000488069 TTF1Q15361 905 aaPredicted RBP22.05■■□□□ 1.12
CCDC12-205ENST00000488069 FASTKD5Q7L8L6 764 aaKnown RBP22.05■■□□□ 1.12
CCDC12-205ENST00000488069 PRRT2Q7Z6L0 340 aaPredicted RBP22.05■■□□□ 1.12
CCDC12-205ENST00000488069 BCL11AQ9H165 835 aa22.05■■□□□ 1.12
CCDC12-205ENST00000488069 PTPN22Q9Y2R2 807 aa22.05■■□□□ 1.12
CCDC12-205ENST00000488069 CDK5RAP2Q96SN8 1893 aa22.05■■□□□ 1.12
CCDC12-205ENST00000488069 FOCADQ5VW36 1801 aa22.04■■□□□ 1.12
CCDC12-205ENST00000488069 DYNLL1P63167 89 aaKnown RBP22.04■■□□□ 1.12
CCDC12-205ENST00000488069 KIF22Q14807 665 aa22.04■■□□□ 1.12
CCDC12-205ENST00000488069 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.04■■□□□ 1.12
CCDC12-205ENST00000488069 CAP1Q01518 475 aa22.03■■□□□ 1.12
CCDC12-205ENST00000488069 MIGA1Q8NAN2 632 aa22.03■■□□□ 1.12
CCDC12-205ENST00000488069 PARK7Q99497 189 aaKnown RBP22.03■■□□□ 1.12
CCDC12-205ENST00000488069 PHIPQ8WWQ0 1821 aa22.02■■□□□ 1.12
CCDC12-205ENST00000488069 TRIM75PA6NK02 468 aa22.02■■□□□ 1.12
CCDC12-205ENST00000488069 GPAT2Q6NUI2 795 aa22.02■■□□□ 1.12
CCDC12-205ENST00000488069 C17orf99Q6UX52 265 aa22.02■■□□□ 1.12
CCDC12-205ENST00000488069 GADL1Q6ZQY3 521 aa22.02■■□□□ 1.12
CCDC12-205ENST00000488069 TRIM34Q9BYJ4 488 aa22.02■■□□□ 1.12
CCDC12-205ENST00000488069 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.02■■□□□ 1.12
CCDC12-205ENST00000488069 HLA-DOAP06340 250 aa22.01■■□□□ 1.11
CCDC12-205ENST00000488069 CAP2P40123 477 aa22.01■■□□□ 1.11
CCDC12-205ENST00000488069 LACTBP83111 547 aaPredicted RBP22.01■■□□□ 1.11
CCDC12-205ENST00000488069 CCDC84Q86UT8 332 aaPredicted RBP22.01■■□□□ 1.11
CCDC12-205ENST00000488069 FOXP4Q8IVH2 680 aaPredicted RBP22.01■■□□□ 1.11
CCDC12-205ENST00000488069 CRACR2BQ8N4Y2 399 aaPredicted RBP22.01■■□□□ 1.11
CCDC12-205ENST00000488069 DNAJC2Q99543 621 aaKnown RBP22.01■■□□□ 1.11
CCDC12-205ENST00000488069 TBC1D2Q9BYX2 928 aa22.01■■□□□ 1.11
CCDC12-205ENST00000488069 CPA4Q9UI42 421 aa22.01■■□□□ 1.11
CCDC12-205ENST00000488069 PALD1Q9ULE6 856 aa22.01■■□□□ 1.11
CCDC12-205ENST00000488069 ADGRA2Q96PE1 1338 aa22.01■■□□□ 1.11
CCDC12-205ENST00000488069 SIPA1L1O43166 1804 aa22.01■■□□□ 1.11
CCDC12-205ENST00000488069 PTPRFP10586 1907 aa22■■□□□ 1.11
CCDC12-205ENST00000488069 USP5P45974 858 aa22■■□□□ 1.11
CCDC12-205ENST00000488069 LRRCC1Q9C099 1032 aa22■■□□□ 1.11
CCDC12-205ENST00000488069 SAP30BPQ9UHR5 308 aaKnown RBP22■■□□□ 1.11
CCDC12-205ENST00000488069 SLC45A1Q9Y2W3 748 aa22■■□□□ 1.11
CCDC12-205ENST00000488069 ATAD5Q96QE3 1844 aa22■■□□□ 1.11
CCDC12-205ENST00000488069 GOLIM4O00461 696 aa21.99■■□□□ 1.11
CCDC12-205ENST00000488069 RRP1BQ14684 758 aaKnown RBP21.99■■□□□ 1.11
CCDC12-205ENST00000488069 METTL16Q86W50 562 aaKnown RBP21.99■■□□□ 1.11
CCDC12-205ENST00000488069 ARHGAP39Q9C0H5 1083 aa21.99■■□□□ 1.11
CCDC12-205ENST00000488069 USP17L5A8MUK1 530 aa21.98■■□□□ 1.11
CCDC12-205ENST00000488069 GNRH1P01148 92 aa21.98■■□□□ 1.11
CCDC12-205ENST00000488069 CYP2C8P10632 490 aa21.98■■□□□ 1.11
CCDC12-205ENST00000488069 SLC9C2Q5TAH2 1124 aa21.98■■□□□ 1.11
CCDC12-205ENST00000488069 ZNF280CQ8ND82 737 aa21.98■■□□□ 1.11
CCDC12-205ENST00000488069 MAGEB6P1A0A0J9YX57 407 aa21.97■■□□□ 1.11
CCDC12-205ENST00000488069 ASNSP08243 561 aa21.97■■□□□ 1.11
CCDC12-205ENST00000488069 PDE6AP16499 860 aa21.97■■□□□ 1.11
CCDC12-205ENST00000488069 SPP2Q13103 211 aa21.97■■□□□ 1.11
CCDC12-205ENST00000488069 DNAJC18Q9H819 358 aa21.97■■□□□ 1.11
CCDC12-205ENST00000488069 AS3MTQ9HBK9 375 aa21.97■■□□□ 1.11
CCDC12-205ENST00000488069 AGTPBP1Q9UPW5 1226 aa21.97■■□□□ 1.11
CCDC12-205ENST00000488069 CENPFP49454 3210 aa21.97■■□□□ 1.11
CCDC12-205ENST00000488069 MYH1P12882 1939 aa21.96■■□□□ 1.11
CCDC12-205ENST00000488069 ATP5JP18859 108 aa21.96■■□□□ 1.11
CCDC12-205ENST00000488069 SLC4A8Q2Y0W8 1093 aa21.96■■□□□ 1.11
CCDC12-205ENST00000488069 PROCA1Q8NCQ7 364 aaPredicted RBP21.96■■□□□ 1.11
CCDC12-205ENST00000488069 ARMC5Q96C12 935 aa21.96■■□□□ 1.11
CCDC12-205ENST00000488069 RIOK1Q9BRS2 568 aaKnown RBP21.96■■□□□ 1.11
CCDC12-205ENST00000488069 BOLA2Q9H3K6 86 aa21.96■■□□□ 1.11
CCDC12-205ENST00000488069 PAG1Q9NWQ8 432 aa21.96■■□□□ 1.11
CCDC12-205ENST00000488069 PTCH2Q9Y6C5 1203 aa21.96■■□□□ 1.11
CCDC12-205ENST00000488069 ZSWIM8A7E2V4 1837 aa21.96■■□□□ 1.11
CCDC12-205ENST00000488069 BCRP11274 1271 aa21.95■■□□□ 1.1
CCDC12-205ENST00000488069 PRMT2P55345 433 aa21.95■■□□□ 1.1
CCDC12-205ENST00000488069 SLC9C1Q4G0N8 1177 aa21.95■■□□□ 1.1
CCDC12-205ENST00000488069 EDC3Q96F86 508 aaKnown RBP21.95■■□□□ 1.1
CCDC12-205ENST00000488069 GINM1Q9NU53 330 aa21.95■■□□□ 1.1
CCDC12-205ENST00000488069 ZNF532Q9HCE3 1301 aa21.95■■□□□ 1.1
CCDC12-205ENST00000488069 TNRC18O15417 2968 aaPredicted RBP21.95■■□□□ 1.1
CCDC12-205ENST00000488069 ECM2O94769 699 aaPredicted RBP21.94■■□□□ 1.1
CCDC12-205ENST00000488069 PSMC4P43686 418 aa21.94■■□□□ 1.1
CCDC12-205ENST00000488069 HMGCS2P54868 508 aa21.94■■□□□ 1.1
CCDC12-205ENST00000488069 TTC6Q86TZ1 520 aa21.94■■□□□ 1.1
CCDC12-205ENST00000488069 SMCR8Q8TEV9 937 aaPredicted RBP21.94■■□□□ 1.1
CCDC12-205ENST00000488069 HAUS7Q99871 368 aa21.94■■□□□ 1.1
CCDC12-205ENST00000488069 CRNKL1Q9BZJ0 848 aaKnown RBP21.94■■□□□ 1.1
CCDC12-205ENST00000488069 PNMA3Q9UL41 463 aa21.94■■□□□ 1.1
CCDC12-205ENST00000488069 LOC285556D6RIA3 1793 aa21.93■■□□□ 1.1
CCDC12-205ENST00000488069 SMARCA5O60264 1052 aaPredicted RBP21.93■■□□□ 1.1
CCDC12-205ENST00000488069 GDF11O95390 407 aa21.93■■□□□ 1.1
CCDC12-205ENST00000488069 FMNL1O95466 1100 aaPredicted RBP21.93■■□□□ 1.1
CCDC12-205ENST00000488069 HOXD10P28358 340 aa21.93■■□□□ 1.1
CCDC12-205ENST00000488069 RRP1P56182 461 aaKnown RBP21.93■■□□□ 1.1
CCDC12-205ENST00000488069 TREML2Q5T2D2 321 aa21.93■■□□□ 1.1
CCDC12-205ENST00000488069 NBPF11Q86T75 865 aa21.93■■□□□ 1.1
CCDC12-205ENST00000488069 TRIM47Q96LD4 638 aa21.93■■□□□ 1.1
CCDC12-205ENST00000488069 WDR18Q9BV38 432 aa21.93■■□□□ 1.1
CCDC12-205ENST00000488069 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.93■■□□□ 1.13e-10■■□□□ 12.7
CCDC12-205ENST00000488069 EHD4Q9H223 541 aa21.93■■□□□ 1.1
CCDC12-205ENST00000488069 DCTPP1Q9H773 170 aa21.93■■□□□ 1.1
CCDC12-205ENST00000488069 SERPINB13Q9UIV8 391 aa21.93■■□□□ 1.1
CCDC12-205ENST00000488069 TCRBV5S4A2TA0A5A2 114 aa21.92■■□□□ 1.1
CCDC12-205ENST00000488069 CTGFP29279 349 aa21.92■■□□□ 1.1
CCDC12-205ENST00000488069 PABPC4Q13310 644 aaKnown RBP eCLIP21.92■■□□□ 1.1
CCDC12-205ENST00000488069 SH3D19Q5HYK7 790 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms