RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 CDC5LQ99459 802 aaKnown RBP9.77□□□□□ -0.85
NECTIN3-209ENST00000488016 RTFDC1Q9BY42 306 aaPredicted RBP9.77□□□□□ -0.85
NECTIN3-209ENST00000488016 ANKIB1Q9P2G1 1089 aa9.77□□□□□ -0.85
NECTIN3-209ENST00000488016 GJA3Q9Y6H8 435 aa9.77□□□□□ -0.85
NECTIN3-209ENST00000488016 SHTN1A0MZ66 631 aa9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 HSP90B1P14625 803 aaKnown RBP9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 IGHMBP2P38935 993 aaKnown RBP9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 CHRNDQ07001 517 aa9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 KIAA2012Q0VF49 1180 aa9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 CBLBQ13191 982 aa9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 IFIT5Q13325 482 aaKnown RBP9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 RABL6Q3YEC7 729 aaPredicted RBP9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 LRRC24Q50LG9 513 aa9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 C20orf194Q5TEA3 1177 aa9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 INTS3Q68E01 1043 aaKnown RBP9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 TXNRD3Q86VQ6 643 aa9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 BANK1Q8NDB2 785 aa9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 ARHGAP45Q92619 1136 aa9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 IRF7Q92985 503 aa9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 TMX4Q9H1E5 349 aaPredicted RBP9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 BSDC1Q9NW68 430 aaPredicted RBP9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 RCAN3Q9UKA8 241 aa9.76□□□□□ -0.85
NECTIN3-209ENST00000488016 SCN9AQ15858 1988 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 GLTPD2A6NH11 291 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 ZBBXA8MT70 800 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 FZD9O00144 591 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 APBB1O00213 710 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 WIPF1O43516 503 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 RAD17O75943 681 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 UBTFL1P0CB47 393 aaPredicted RBP9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 VEGFBP49765 207 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 INSM1Q01101 510 aaPredicted RBP9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 WASHC4Q2M389 1173 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 CCDC57Q2TAC2 916 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 TAF7LQ5H9L4 462 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 TMC4Q7Z404 712 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 ITPRIPQ8IWB1 547 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 NIM1KQ8IY84 436 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 MPHOSPH8Q99549 860 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 GGA1Q9UJY5 639 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 PA2G4Q9UQ80 394 aaKnown RBP9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 XDHP47989 1333 aa9.75□□□□□ -0.85
NECTIN3-209ENST00000488016 IPO8O15397 1037 aaKnown RBP9.74□□□□□ -0.85
NECTIN3-209ENST00000488016 ECE2O60344 883 aa9.74□□□□□ -0.85
NECTIN3-209ENST00000488016 NEFLP07196 543 aa9.74□□□□□ -0.85
NECTIN3-209ENST00000488016 RFX5P48382 616 aaPredicted RBP9.74□□□□□ -0.85
NECTIN3-209ENST00000488016 CXCL9Q07325 125 aa9.74□□□□□ -0.85
NECTIN3-209ENST00000488016 Q6ZVU0 165 aa9.74□□□□□ -0.85
NECTIN3-209ENST00000488016 FTSJ3Q8IY81 847 aaKnown RBP9.74□□□□□ -0.85
NECTIN3-209ENST00000488016 DZIP1LQ8IYY4 767 aaKnown RBP9.74□□□□□ -0.85
NECTIN3-209ENST00000488016 JDP2Q8WYK2 163 aa9.74□□□□□ -0.85
NECTIN3-209ENST00000488016 SIL1Q9H173 461 aa9.74□□□□□ -0.85
NECTIN3-209ENST00000488016 CNNM1Q9NRU3 951 aa9.74□□□□□ -0.85
NECTIN3-209ENST00000488016 PODXL2Q9NZ53 605 aa9.74□□□□□ -0.85
NECTIN3-209ENST00000488016 H3BM21 787 aa9.73□□□□□ -0.85
NECTIN3-209ENST00000488016 ERICH6BQ5W0A0 696 aa9.73□□□□□ -0.85
NECTIN3-209ENST00000488016 LDHAL6AQ6ZMR3 332 aa9.73□□□□□ -0.85
NECTIN3-209ENST00000488016 SMC1BQ8NDV3 1235 aa9.73□□□□□ -0.85
NECTIN3-209ENST00000488016 SUPT20HQ8NEM7 779 aa9.73□□□□□ -0.85
NECTIN3-209ENST00000488016 MXD3Q9BW11 206 aa9.73□□□□□ -0.85
NECTIN3-209ENST00000488016 JAG2Q9Y219 1238 aa9.73□□□□□ -0.85
NECTIN3-209ENST00000488016 PCDHB9Q9Y5E1 797 aa9.73□□□□□ -0.85
NECTIN3-209ENST00000488016 KDM2BQ8NHM5 1336 aa9.73□□□□□ -0.85
NECTIN3-209ENST00000488016 PNMA6EA0A0J9YXQ4 647 aa9.72□□□□□ -0.85
NECTIN3-209ENST00000488016 PSMD14O00487 310 aa9.72□□□□□ -0.85
NECTIN3-209ENST00000488016 FOXN1O15353 648 aa9.72□□□□□ -0.85
NECTIN3-209ENST00000488016 SCNN1DP51172 638 aa9.72□□□□□ -0.85
NECTIN3-209ENST00000488016 EIF6P56537 245 aaKnown RBP9.72□□□□□ -0.85
NECTIN3-209ENST00000488016 PTPN12Q05209 780 aaKnown RBP9.72□□□□□ -0.85
NECTIN3-209ENST00000488016 ZNRF3Q9ULT6 936 aa9.72□□□□□ -0.85
NECTIN3-209ENST00000488016 COG6Q9Y2V7 657 aa9.72□□□□□ -0.85
NECTIN3-209ENST00000488016 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.72□□□□□ -0.85
NECTIN3-209ENST00000488016 ZNF804BA4D1E1 1349 aa9.72□□□□□ -0.85
NECTIN3-209ENST00000488016 IRS2Q9Y4H2 1338 aa9.72□□□□□ -0.85
NECTIN3-209ENST00000488016 ZNF646O15015 1829 aaPredicted RBP9.71□□□□□ -0.85
NECTIN3-209ENST00000488016 TTLL8A6PVC2 850 aa9.71□□□□□ -0.86
NECTIN3-209ENST00000488016 FBXO45P0C2W1 286 aa9.71□□□□□ -0.86
NECTIN3-209ENST00000488016 ATP2B4P23634 1241 aa9.71□□□□□ -0.86
NECTIN3-209ENST00000488016 EPS15P42566 896 aa9.71□□□□□ -0.86
NECTIN3-209ENST00000488016 KCNJ4P48050 445 aa9.71□□□□□ -0.86
NECTIN3-209ENST00000488016 GMPSP49915 693 aaPredicted RBP9.71□□□□□ -0.86
NECTIN3-209ENST00000488016 LCE2CQ5TA81 110 aa9.71□□□□□ -0.86
NECTIN3-209ENST00000488016 CIAPIN1Q6FI81 312 aa9.71□□□□□ -0.86
NECTIN3-209ENST00000488016 ATG9AQ7Z3C6 839 aa9.71□□□□□ -0.86
NECTIN3-209ENST00000488016 EYA3Q99504 573 aa9.71□□□□□ -0.86
NECTIN3-209ENST00000488016 ZC3H12CQ9C0D7 883 aaKnown RBP9.71□□□□□ -0.86
NECTIN3-209ENST00000488016 RIPOR2Q9Y4F9 1068 aa9.71□□□□□ -0.86
NECTIN3-209ENST00000488016 NDUFB9Q9Y6M9 179 aa9.71□□□□□ -0.86
NECTIN3-209ENST00000488016 MED23Q9ULK4 1368 aa9.71□□□□□ -0.86
NECTIN3-209ENST00000488016 ESPNB1AK53 854 aa9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 ERVH48-1M5A8F1 160 aa9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 ZBTB7BO15156 539 aaPredicted RBP9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 SRGAP3O43295 1099 aa9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 EGFRP00533 1210 aa9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 GNAI2P04899 355 aa9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 RELBQ01201 579 aa9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 EAPPQ56P03 285 aaPredicted RBP9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 METTL24Q5JXM2 366 aa9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 GPC2Q8N158 579 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms