RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 DDAH1O94760 285 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 PTPRAP18433 802 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 ITGA6P23229 1130 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 MASP1P48740 699 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 PCBP4P57723 403 aaKnown RBP4.64□□□□□ -1.67
GPNMB-212ENST00000487890 MTERF2Q49AM1 385 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 C2orf27AQ580R0 203 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 HGSNATQ68CP4 663 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 C6orf15Q6UXA7 325 aaPredicted RBP4.64□□□□□ -1.67
GPNMB-212ENST00000487890 C16orf86Q6ZW13 317 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 NOL8Q76FK4 1167 aaKnown RBP4.64□□□□□ -1.67
GPNMB-212ENST00000487890 TTC6Q86TZ1 520 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 FAM35AQ86V20 835 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 JMYQ8N9B5 988 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 STAG1Q8WVM7 1258 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 EMILIN2Q9BXX0 1053 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 SMG9Q9H0W8 520 aaKnown RBP4.64□□□□□ -1.67
GPNMB-212ENST00000487890 RBSNQ9H1K0 784 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 METTL14Q9HCE5 456 aaKnown RBP4.64□□□□□ -1.67
GPNMB-212ENST00000487890 ATP13A2Q9NQ11 1180 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 ZMYM5Q9UJ78 669 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 PRKAB1Q9Y478 270 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 KDM2BQ8NHM5 1336 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 POGZQ7Z3K3 1410 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 SCAPERQ9BY12 1400 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 FYCO1Q9BQS8 1478 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 ZMYM4Q5VZL5 1548 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 UPK3BL1B0FP48 263 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 UPK3BL2E5RIL1 263 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 GPR25O00155 361 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 GFRA2O00451 464 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 EIF5BO60841 1220 aaKnown RBP4.63□□□□□ -1.67
GPNMB-212ENST00000487890 PCSK7Q16549 785 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 C21orf62-AS1Q17RA5 79 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 ARSHQ5FYA8 562 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 EFCAB2Q5VUJ9 269 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 MAP1SQ66K74 1059 aaPredicted RBP4.63□□□□□ -1.67
GPNMB-212ENST00000487890 MRM1Q6IN84 353 aaKnown RBP4.63□□□□□ -1.67
GPNMB-212ENST00000487890 FAM178BQ8IXR5 827 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 CRIPAKQ8N1N5 446 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 MICALL1Q8N3F8 863 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 C19orf47Q8N9M1 422 aaKnown RBP4.63□□□□□ -1.67
GPNMB-212ENST00000487890 THAP3Q8WTV1 239 aaPredicted RBP4.63□□□□□ -1.67
GPNMB-212ENST00000487890 GMCL1Q96IK5 515 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 ZC3H12CQ9C0D7 883 aaKnown RBP4.63□□□□□ -1.67
GPNMB-212ENST00000487890 CACNA2D2Q9NY47 1150 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 DDX56Q9NY93 547 aaKnown RBP4.63□□□□□ -1.67
GPNMB-212ENST00000487890 KLF15Q9UIH9 416 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 NAGPAQ9UK23 515 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 SLC6A14Q9UN76 642 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 PHF24Q9UPV7 400 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 PTCH2Q9Y6C5 1203 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 PREX2Q70Z35 1606 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 PLCH2O75038 1416 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 CASKIN1Q8WXD9 1431 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 YEATS2Q9ULM3 1422 aa4.63□□□□□ -1.67
GPNMB-212ENST00000487890 PTPRMP28827 1452 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 ITSN2Q9NZM3 1697 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 ST8SIA5O15466 376 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 SIN3BO75182 1162 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 GSTP1P09211 210 aaKnown RBP4.62□□□□□ -1.67
GPNMB-212ENST00000487890 EPHA1P21709 976 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 CDC25BP30305 580 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 SSRP1Q08945 709 aaKnown RBP4.62□□□□□ -1.67
GPNMB-212ENST00000487890 IKBKEQ14164 716 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 INPP5AQ14642 412 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 PLEKHG6Q3KR16 790 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 PKDCCQ504Y2 493 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 ZNF468Q5VIY5 522 aaPredicted RBP4.62□□□□□ -1.67
GPNMB-212ENST00000487890 DIEXFQ68CQ4 756 aaKnown RBP4.62□□□□□ -1.67
GPNMB-212ENST00000487890 ELMSAN1Q6PJG2 1045 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 GPBAR1Q8TDU6 330 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 FEZ1Q99689 392 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 CORINQ9Y5Q5 1042 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 SIGLEC1Q9BZZ2 1709 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 LTBP3Q9NS15 1303 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 ZNF518AQ6AHZ1 1483 aa4.62□□□□□ -1.67
GPNMB-212ENST00000487890 SETD1BQ9UPS6 1966 aaKnown RBP4.62□□□□□ -1.67
GPNMB-212ENST00000487890 DNAJA2O60884 412 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 HTR3BO95264 441 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 PARNO95453 639 aaKnown RBP4.61□□□□□ -1.67
GPNMB-212ENST00000487890 ASMTLO95671 621 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 ECEL1O95672 775 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 FAM153BP0C7A2 387 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 ACRP10323 421 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 HCLS1P14317 486 aaPredicted RBP4.61□□□□□ -1.67
GPNMB-212ENST00000487890 GUCY2CP25092 1073 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 CDC27P30260 824 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 ZYXQ15942 572 aaKnown RBP4.61□□□□□ -1.67
GPNMB-212ENST00000487890 DALRD3Q5D0E6 543 aaKnown RBP4.61□□□□□ -1.67
GPNMB-212ENST00000487890 SCARA3Q6AZY7 606 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 VWA5B2Q8N398 1253 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 ZSCAN1Q8NBB4 408 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 TNFRSF25Q93038 417 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 TM9SF2Q99805 663 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 LPIN3Q9BQK8 851 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 AAASQ9NRG9 546 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 PCDHA4Q9UN74 947 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 PRR36Q9H6K5 1346 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 MTUS2Q5JR59 1369 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms