RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 ZSCAN29Q8IWY8 852 aaPredicted RBP20.44■□□□□ 0.86
TOM1-214ENST00000487670 IDI2Q9BXS1 227 aa20.44■□□□□ 0.86
TOM1-214ENST00000487670 LRRFIP2Q9Y608 721 aaKnown RBP20.44■□□□□ 0.86
TOM1-214ENST00000487670 PRKAR2AP13861 404 aaKnown RBP20.43■□□□□ 0.86
TOM1-214ENST00000487670 SLC5A1P13866 664 aa20.43■□□□□ 0.86
TOM1-214ENST00000487670 CAPN2P17655 700 aa20.43■□□□□ 0.86
TOM1-214ENST00000487670 PHKA1P46020 1223 aa20.43■□□□□ 0.86
TOM1-214ENST00000487670 ATG9AQ7Z3C6 839 aa20.43■□□□□ 0.86
TOM1-214ENST00000487670 GAKO14976 1311 aa20.43■□□□□ 0.86
TOM1-214ENST00000487670 CTNND1O60716 968 aaKnown RBP20.42■□□□□ 0.86
TOM1-214ENST00000487670 ENTPD3O75355 529 aa20.42■□□□□ 0.86
TOM1-214ENST00000487670 CCND3P30281 292 aaPredicted RBP20.42■□□□□ 0.86
TOM1-214ENST00000487670 HMGCS2P54868 508 aa20.42■□□□□ 0.86
TOM1-214ENST00000487670 ASCC2Q9H1I8 757 aaPredicted RBP20.42■□□□□ 0.86
TOM1-214ENST00000487670 SPP2Q13103 211 aa20.41■□□□□ 0.86
TOM1-214ENST00000487670 CCL14Q16627 93 aa20.41■□□□□ 0.86
TOM1-214ENST00000487670 LPIN2Q92539 896 aa20.41■□□□□ 0.86
TOM1-214ENST00000487670 EYA2O00167 538 aa20.4■□□□□ 0.86
TOM1-214ENST00000487670 ADORA1P30542 326 aa20.4■□□□□ 0.86
TOM1-214ENST00000487670 LHX8Q68G74 356 aa20.4■□□□□ 0.86
TOM1-214ENST00000487670 ZNF384Q8TF68 577 aa20.4■□□□□ 0.86
TOM1-214ENST00000487670 TXNRD2Q9NNW7 524 aa20.4■□□□□ 0.86
TOM1-214ENST00000487670 SALL1Q9NSC2 1324 aa20.39■□□□□ 0.85
TOM1-214ENST00000487670 CACNB2Q08289 660 aaPredicted RBP20.39■□□□□ 0.85
TOM1-214ENST00000487670 SHROOM1Q2M3G4 852 aaPredicted RBP20.39■□□□□ 0.85
TOM1-214ENST00000487670 PROCA1Q8NCQ7 364 aaPredicted RBP20.39■□□□□ 0.85
TOM1-214ENST00000487670 SIL1Q9H173 461 aa20.39■□□□□ 0.85
TOM1-214ENST00000487670 PNMA3Q9UL41 463 aa20.39■□□□□ 0.85
TOM1-214ENST00000487670 BTDP43251 543 aa20.38■□□□□ 0.85
TOM1-214ENST00000487670 PRDM6Q9NQX0 595 aa20.38■□□□□ 0.85
TOM1-214ENST00000487670 REV3LO60673 3130 aa20.38■□□□□ 0.85
TOM1-214ENST00000487670 RHBDL3P58872 404 aa20.37■□□□□ 0.85
TOM1-214ENST00000487670 JAG1P78504 1218 aa20.37■□□□□ 0.85
TOM1-214ENST00000487670 ATP2B3Q16720 1220 aa20.37■□□□□ 0.85
TOM1-214ENST00000487670 FAM109BQ6ICB4 259 aaPredicted RBP20.37■□□□□ 0.85
TOM1-214ENST00000487670 POTEEQ6S8J3 1075 aa20.37■□□□□ 0.85
TOM1-214ENST00000487670 USP44Q9H0E7 712 aa20.37■□□□□ 0.85
TOM1-214ENST00000487670 RAPGEFL1Q9UHV5 662 aa20.37■□□□□ 0.85
TOM1-214ENST00000487670 GCLCP48506 637 aaPredicted RBP20.36■□□□□ 0.85
TOM1-214ENST00000487670 WDR63Q8IWG1 891 aa20.36■□□□□ 0.85
TOM1-214ENST00000487670 ZNF280CQ8ND82 737 aa20.36■□□□□ 0.85
TOM1-214ENST00000487670 CDX2Q99626 313 aaPredicted RBP20.36■□□□□ 0.85
TOM1-214ENST00000487670 MORF4L1Q9UBU8 362 aa20.36■□□□□ 0.85
TOM1-214ENST00000487670 PORCNQ9H237 461 aa20.35■□□□□ 0.85
TOM1-214ENST00000487670 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.35■□□□□ 0.85
TOM1-214ENST00000487670 MYH1P12882 1939 aa20.35■□□□□ 0.85
TOM1-214ENST00000487670 MROH7-TTC4A0A0A0MT08 1334 aa20.34■□□□□ 0.85
TOM1-214ENST00000487670 RASGRF1Q13972 1273 aa20.34■□□□□ 0.85
TOM1-214ENST00000487670 Q3C1V9 767 aa20.34■□□□□ 0.85
TOM1-214ENST00000487670 MAFAQ8NHW3 353 aaPredicted RBP20.34■□□□□ 0.85
TOM1-214ENST00000487670 MYLIPQ8WY64 445 aa20.34■□□□□ 0.85
TOM1-214ENST00000487670 USP6NLQ92738 828 aa20.34■□□□□ 0.85
TOM1-214ENST00000487670 P2RX7Q99572 595 aaKnown RBP20.34■□□□□ 0.85
TOM1-214ENST00000487670 SMCHD1A6NHR9 2005 aa20.33■□□□□ 0.85
TOM1-214ENST00000487670 C9orf50Q5SZB4 431 aa20.33■□□□□ 0.85
TOM1-214ENST00000487670 ZNF697Q5TEC3 545 aa20.33■□□□□ 0.85
TOM1-214ENST00000487670 DZIP1Q86YF9 867 aaKnown RBP20.33■□□□□ 0.85
TOM1-214ENST00000487670 TTYH1Q9H313 450 aaPredicted RBP20.33■□□□□ 0.85
TOM1-214ENST00000487670 ABCF2Q9UG63 623 aa20.33■□□□□ 0.85
TOM1-214ENST00000487670 DENND2AQ9ULE3 1009 aa20.33■□□□□ 0.85
TOM1-214ENST00000487670 PA2G4Q9UQ80 394 aaKnown RBP20.33■□□□□ 0.85
TOM1-214ENST00000487670 ZKSCAN1P17029 563 aaPredicted RBP20.32■□□□□ 0.84
TOM1-214ENST00000487670 ATN1P54259 1190 aaPredicted RBP20.32■□□□□ 0.84
TOM1-214ENST00000487670 MTMR2Q13614 643 aa20.32■□□□□ 0.84
TOM1-214ENST00000487670 SH3D19Q5HYK7 790 aa20.32■□□□□ 0.84
TOM1-214ENST00000487670 CCDC102BQ68D86 513 aa20.32■□□□□ 0.84
TOM1-214ENST00000487670 MRPL50Q8N5N7 158 aaKnown RBP20.32■□□□□ 0.84
TOM1-214ENST00000487670 NUDT12Q9BQG2 462 aa20.32■□□□□ 0.84
TOM1-214ENST00000487670 OSBPL5Q9H0X9 879 aaPredicted RBP20.32■□□□□ 0.84
TOM1-214ENST00000487670 FLRT1Q9NZU1 646 aa20.32■□□□□ 0.84
TOM1-214ENST00000487670 MYO9BQ13459 2157 aa20.32■□□□□ 0.84
TOM1-214ENST00000487670 ZNFX1Q9P2E3 1918 aaKnown RBP20.31■□□□□ 0.84
TOM1-214ENST00000487670 TBC1D12O60347 775 aa20.31■□□□□ 0.84
TOM1-214ENST00000487670 CAP2P40123 477 aa20.31■□□□□ 0.84
TOM1-214ENST00000487670 SHHQ15465 462 aa20.31■□□□□ 0.84
TOM1-214ENST00000487670 SENP6Q9GZR1 1112 aaPredicted RBP20.31■□□□□ 0.84
TOM1-214ENST00000487670 RBPJLQ9UBG7 517 aa20.31■□□□□ 0.84
TOM1-214ENST00000487670 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.31■□□□□ 0.84
TOM1-214ENST00000487670 HERVK_113P62684 666 aa20.3■□□□□ 0.84
TOM1-214ENST00000487670 MECOMQ03112 1051 aa20.3■□□□□ 0.84
TOM1-214ENST00000487670 NCBP3Q53F19 620 aaKnown RBP20.3■□□□□ 0.84
TOM1-214ENST00000487670 MORN1Q5T089 497 aa20.3■□□□□ 0.84
TOM1-214ENST00000487670 PI16Q6UXB8 463 aa20.3■□□□□ 0.84
TOM1-214ENST00000487670 SEMA6BQ9H3T3 888 aa20.3■□□□□ 0.84
TOM1-214ENST00000487670 NDUFB9Q9Y6M9 179 aa20.3■□□□□ 0.84
TOM1-214ENST00000487670 GBF1Q92538 1859 aa20.29■□□□□ 0.84
TOM1-214ENST00000487670 USP17L5A8MUK1 530 aa20.29■□□□□ 0.84
TOM1-214ENST00000487670 XRCC5P13010 732 aaKnown RBP20.29■□□□□ 0.84
TOM1-214ENST00000487670 IRX3P78415 501 aaPredicted RBP20.29■□□□□ 0.84
TOM1-214ENST00000487670 GPR142Q7Z601 462 aa20.29■□□□□ 0.84
TOM1-214ENST00000487670 FAM163AQ96GL9 167 aaPredicted RBP20.29■□□□□ 0.84
TOM1-214ENST00000487670 DNAJC18Q9H819 358 aa20.29■□□□□ 0.84
TOM1-214ENST00000487670 GNL3LQ9NVN8 582 aaKnown RBP20.29■□□□□ 0.84
TOM1-214ENST00000487670 PLXNA1Q9UIW2 1896 aa20.28■□□□□ 0.84
TOM1-214ENST00000487670 GPR75-ASB3A0A0A6YYF3 556 aa20.28■□□□□ 0.84
TOM1-214ENST00000487670 PABPC4Q13310 644 aaKnown RBP eCLIP20.28■□□□□ 0.84
TOM1-214ENST00000487670 USP38Q8NB14 1042 aa20.28■□□□□ 0.84
TOM1-214ENST00000487670 SOCS4Q8WXH5 440 aa20.28■□□□□ 0.84
TOM1-214ENST00000487670 PAGR1Q9BTK6 254 aa20.28■□□□□ 0.84
TOM1-214ENST00000487670 SEMA3EO15041 775 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms