RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 COPRSQ9NQ92 184 aa19.11■□□□□ 0.65
MCF2L-228ENST00000487354 MYO5AQ9Y4I1 1855 aaKnown RBP19.11■□□□□ 0.65
MCF2L-228ENST00000487354 GPR75-ASB3A0A0A6YYF3 556 aa19.1■□□□□ 0.65
MCF2L-228ENST00000487354 BMP8BP34820 402 aa19.1■□□□□ 0.65
MCF2L-228ENST00000487354 COA7Q96BR5 231 aa19.1■□□□□ 0.65
MCF2L-228ENST00000487354 TAOK2Q9UL54 1235 aa19.1■□□□□ 0.65
MCF2L-228ENST00000487354 NPM3O75607 178 aaKnown RBP19.09■□□□□ 0.65
MCF2L-228ENST00000487354 HMGCRP04035 888 aa19.09■□□□□ 0.65
MCF2L-228ENST00000487354 UBTFL1P0CB47 393 aaPredicted RBP19.09■□□□□ 0.65
MCF2L-228ENST00000487354 MECOMQ03112 1051 aa19.09■□□□□ 0.65
MCF2L-228ENST00000487354 NECAB2Q7Z6G3 386 aa19.09■□□□□ 0.65
MCF2L-228ENST00000487354 C7orf61Q8IZ16 206 aa19.09■□□□□ 0.65
MCF2L-228ENST00000487354 ANKLE1Q8NAG6 615 aa19.09■□□□□ 0.65
MCF2L-228ENST00000487354 ABCF2Q9UG63 623 aa19.09■□□□□ 0.65
MCF2L-228ENST00000487354 TIMM10P62072 90 aa19.08■□□□□ 0.64
MCF2L-228ENST00000487354 SLFN5Q08AF3 891 aa19.08■□□□□ 0.64
MCF2L-228ENST00000487354 ALDH1L2Q3SY69 923 aa19.08■□□□□ 0.64
MCF2L-228ENST00000487354 OSBPL5Q9H0X9 879 aaPredicted RBP19.08■□□□□ 0.64
MCF2L-228ENST00000487354 PNMA3Q9UL41 463 aa19.08■□□□□ 0.64
MCF2L-228ENST00000487354 ZMYND8Q9ULU4 1186 aaPredicted RBP19.08■□□□□ 0.64
MCF2L-228ENST00000487354 LAMA2P24043 3122 aaKnown RBP19.07■□□□□ 0.64
MCF2L-228ENST00000487354 E9PSI1 815 aa19.07■□□□□ 0.64
MCF2L-228ENST00000487354 HMGCS2P54868 508 aa19.07■□□□□ 0.64
MCF2L-228ENST00000487354 SPP2Q13103 211 aa19.07■□□□□ 0.64
MCF2L-228ENST00000487354 PI16Q6UXB8 463 aa19.07■□□□□ 0.64
MCF2L-228ENST00000487354 ZNF280CQ8ND82 737 aa19.07■□□□□ 0.64
MCF2L-228ENST00000487354 TRIB2Q92519 343 aa19.07■□□□□ 0.64
MCF2L-228ENST00000487354 ASCC2Q9H1I8 757 aaPredicted RBP19.07■□□□□ 0.64
MCF2L-228ENST00000487354 DNAH12Q6ZR08 3092 aa19.06■□□□□ 0.64
MCF2L-228ENST00000487354 PFASO15067 1338 aa19.06■□□□□ 0.64
MCF2L-228ENST00000487354 RPTORQ8N122 1335 aa19.06■□□□□ 0.64
MCF2L-228ENST00000487354 A0A1B0GUL7 405 aa19.06■□□□□ 0.64
MCF2L-228ENST00000487354 PEX10O60683 326 aa19.06■□□□□ 0.64
MCF2L-228ENST00000487354 GCLCP48506 637 aaPredicted RBP19.06■□□□□ 0.64
MCF2L-228ENST00000487354 SH3D19Q5HYK7 790 aa19.06■□□□□ 0.64
MCF2L-228ENST00000487354 MAP3K21Q5TCX8 1036 aa19.06■□□□□ 0.64
MCF2L-228ENST00000487354 XAGE2Q96GT9 111 aa19.06■□□□□ 0.64
MCF2L-228ENST00000487354 MEIS3Q99687 375 aa19.06■□□□□ 0.64
MCF2L-228ENST00000487354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.06■□□□□ 0.641e-6■■□□□ 11.7
MCF2L-228ENST00000487354 MORF4L1Q9UBU8 362 aa19.06■□□□□ 0.64
MCF2L-228ENST00000487354 CAP2P40123 477 aa19.05■□□□□ 0.64
MCF2L-228ENST00000487354 JAG1P78504 1218 aa19.05■□□□□ 0.64
MCF2L-228ENST00000487354 GPR153Q6NV75 609 aa19.05■□□□□ 0.64
MCF2L-228ENST00000487354 Q7L0L9 218 aa19.05■□□□□ 0.64
MCF2L-228ENST00000487354 SLF2Q8IX21 1173 aa19.05■□□□□ 0.64
MCF2L-228ENST00000487354 NSUN4Q96CB9 384 aaKnown RBP19.05■□□□□ 0.64
MCF2L-228ENST00000487354 SMC4Q9NTJ3 1288 aa19.05■□□□□ 0.64
MCF2L-228ENST00000487354 HMG20BQ9P0W2 317 aa19.05■□□□□ 0.64
MCF2L-228ENST00000487354 OGDHLQ9ULD0 1010 aa19.05■□□□□ 0.64
MCF2L-228ENST00000487354 SYN1P17600 705 aa19.04■□□□□ 0.64
MCF2L-228ENST00000487354 MAGEA10P43363 369 aaPredicted RBP19.04■□□□□ 0.64
MCF2L-228ENST00000487354 TFCP2Q12800 502 aa19.04■□□□□ 0.64
MCF2L-228ENST00000487354 SPTY2D1Q68D10 685 aaPredicted RBP19.04■□□□□ 0.64
MCF2L-228ENST00000487354 CDCA7LQ96GN5 454 aa19.04■□□□□ 0.64
MCF2L-228ENST00000487354 SHROOM1Q2M3G4 852 aaPredicted RBP19.03■□□□□ 0.64
MCF2L-228ENST00000487354 LRIT3Q3SXY7 679 aa19.03■□□□□ 0.64
MCF2L-228ENST00000487354 POTEEQ6S8J3 1075 aa19.03■□□□□ 0.64
MCF2L-228ENST00000487354 TBC1D9Q6ZT07 1266 aa19.03■□□□□ 0.64
MCF2L-228ENST00000487354 ERICH6Q7L0X2 663 aa19.03■□□□□ 0.64
MCF2L-228ENST00000487354 TRMT2AQ8IZ69 625 aaKnown RBP19.03■□□□□ 0.64
MCF2L-228ENST00000487354 NBPF3Q9H094 633 aa19.03■□□□□ 0.64
MCF2L-228ENST00000487354 C11orf49Q9H6J7 331 aa19.03■□□□□ 0.64
MCF2L-228ENST00000487354 DNAJC18Q9H819 358 aa19.03■□□□□ 0.64
MCF2L-228ENST00000487354 TXNRD2Q9NNW7 524 aa19.03■□□□□ 0.64
MCF2L-228ENST00000487354 HMX1Q9NP08 348 aaPredicted RBP19.03■□□□□ 0.64
MCF2L-228ENST00000487354 EYSQ5T1H1 3165 aa19.02■□□□□ 0.64
MCF2L-228ENST00000487354 COL6A1P12109 1028 aa19.02■□□□□ 0.64
MCF2L-228ENST00000487354 DEFB123Q8N688 67 aa19.02■□□□□ 0.64
MCF2L-228ENST00000487354 TBC1D2Q9BYX2 928 aa19.02■□□□□ 0.64
MCF2L-228ENST00000487354 NOB1Q9ULX3 412 aaKnown RBP19.02■□□□□ 0.64
MCF2L-228ENST00000487354 LTBP2Q14767 1821 aa19.02■□□□□ 0.63
MCF2L-228ENST00000487354 USP17L5A8MUK1 530 aa19.01■□□□□ 0.63
MCF2L-228ENST00000487354 MTX1Q13505 466 aa19.01■□□□□ 0.63
MCF2L-228ENST00000487354 MVPQ14764 893 aaKnown RBP19.01■□□□□ 0.63
MCF2L-228ENST00000487354 MTMR10Q9NXD2 777 aa19.01■□□□□ 0.63
MCF2L-228ENST00000487354 MAP4K4O95819 1239 aaPredicted RBP19■□□□□ 0.63
MCF2L-228ENST00000487354 PRKAR2AP13861 404 aaKnown RBP19■□□□□ 0.63
MCF2L-228ENST00000487354 CYP2B6P20813 491 aa19■□□□□ 0.63
MCF2L-228ENST00000487354 ARID4AP29374 1257 aaPredicted RBP19■□□□□ 0.63
MCF2L-228ENST00000487354 PABPC4Q13310 644 aaKnown RBP eCLIP19■□□□□ 0.63
MCF2L-228ENST00000487354 MTMR2Q13614 643 aa19■□□□□ 0.63
MCF2L-228ENST00000487354 TDHQ8IZJ6 230 aa19■□□□□ 0.63
MCF2L-228ENST00000487354 SPATA5Q8NB90 893 aa19■□□□□ 0.63
MCF2L-228ENST00000487354 SH3RF3Q8TEJ3 882 aaPredicted RBP19■□□□□ 0.63
MCF2L-228ENST00000487354 USP6NLQ92738 828 aa19■□□□□ 0.63
MCF2L-228ENST00000487354 WDR18Q9BV38 432 aa19■□□□□ 0.63
MCF2L-228ENST00000487354 MYH1P12882 1939 aa19■□□□□ 0.63
MCF2L-228ENST00000487354 HOXA7P31268 230 aaPredicted RBP18.99■□□□□ 0.63
MCF2L-228ENST00000487354 MCAMP43121 646 aa18.99■□□□□ 0.63
MCF2L-228ENST00000487354 P2RX7Q99572 595 aaKnown RBP18.99■□□□□ 0.63
MCF2L-228ENST00000487354 HERC5Q9UII4 1024 aaKnown RBP18.99■□□□□ 0.63
MCF2L-228ENST00000487354 STXBP5LQ9Y2K9 1186 aa18.99■□□□□ 0.63
MCF2L-228ENST00000487354 SRGAP3O43295 1099 aa18.98■□□□□ 0.63
MCF2L-228ENST00000487354 XRCC5P13010 732 aaKnown RBP18.98■□□□□ 0.63
MCF2L-228ENST00000487354 BACE1P56817 501 aa18.98■□□□□ 0.63
MCF2L-228ENST00000487354 HERVK_113P62684 666 aa18.98■□□□□ 0.63
MCF2L-228ENST00000487354 LHX8Q68G74 356 aa18.98■□□□□ 0.63
MCF2L-228ENST00000487354 METTL16Q86W50 562 aaKnown RBP18.98■□□□□ 0.63
MCF2L-228ENST00000487354 TEX11Q8IYF3 940 aa18.98■□□□□ 0.63
MCF2L-228ENST00000487354 RBPJLQ9UBG7 517 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms