RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 SRSF11Q05519 484 aaKnown RBP8.61□□□□□ -1.03
RTFDC1-209ENST00000487211 SPRED3Q2MJR0 410 aa8.61□□□□□ -1.03
RTFDC1-209ENST00000487211 C3orf58Q8NDZ4 430 aa8.61□□□□□ -1.03
RTFDC1-209ENST00000487211 POP1Q99575 1024 aaKnown RBP8.61□□□□□ -1.03
RTFDC1-209ENST00000487211 SMG9Q9H0W8 520 aaKnown RBP8.61□□□□□ -1.03
RTFDC1-209ENST00000487211 GDF2Q9UK05 429 aaPredicted RBP8.61□□□□□ -1.03
RTFDC1-209ENST00000487211 C1orf167Q5SNV9 1468 aa8.61□□□□□ -1.03
RTFDC1-209ENST00000487211 RALGAPBQ86X10 1494 aa8.61□□□□□ -1.03
RTFDC1-209ENST00000487211 DCCP43146 1447 aa8.61□□□□□ -1.03
RTFDC1-209ENST00000487211 PRR36Q9H6K5 1346 aa8.6□□□□□ -1.03
RTFDC1-209ENST00000487211 A0A096LPE4 126 aa8.6□□□□□ -1.03
RTFDC1-209ENST00000487211 A0A1W2PPZ6 126 aa8.6□□□□□ -1.03
RTFDC1-209ENST00000487211 KRT76Q01546 638 aa8.6□□□□□ -1.03
RTFDC1-209ENST00000487211 PSAPL1Q6NUJ1 521 aa8.6□□□□□ -1.03
RTFDC1-209ENST00000487211 SLCO4C1Q6ZQN7 724 aa8.6□□□□□ -1.03
RTFDC1-209ENST00000487211 MDFIQ99750 246 aa8.6□□□□□ -1.03
RTFDC1-209ENST00000487211 LPIN3Q9BQK8 851 aa8.6□□□□□ -1.03
RTFDC1-209ENST00000487211 KNDC1Q76NI1 1749 aa8.6□□□□□ -1.03
RTFDC1-209ENST00000487211 ADAMTS2O95450 1211 aa8.59□□□□□ -1.03
RTFDC1-209ENST00000487211 ST13P50502 369 aaKnown RBP8.59□□□□□ -1.03
RTFDC1-209ENST00000487211 METTL16Q86W50 562 aaKnown RBP8.59□□□□□ -1.03
RTFDC1-209ENST00000487211 NT5DC4Q86YG4 428 aa8.59□□□□□ -1.03
RTFDC1-209ENST00000487211 PMFBP1Q8TBY8 1022 aa8.59□□□□□ -1.03
RTFDC1-209ENST00000487211 NUDT8Q8WV74 236 aa8.59□□□□□ -1.03
RTFDC1-209ENST00000487211 ACDQ96AP0 544 aa8.59□□□□□ -1.03
RTFDC1-209ENST00000487211 TESK2Q96S53 571 aa8.59□□□□□ -1.03
RTFDC1-209ENST00000487211 FRRS1LQ9P0K9 344 aa8.59□□□□□ -1.03
RTFDC1-209ENST00000487211 BLMP54132 1417 aaPredicted RBP8.59□□□□□ -1.03
RTFDC1-209ENST00000487211 NALCNQ8IZF0 1738 aa8.59□□□□□ -1.03
RTFDC1-209ENST00000487211 ITPKAP23677 461 aa8.58□□□□□ -1.04
RTFDC1-209ENST00000487211 ZFYVE1Q9HBF4 777 aa8.58□□□□□ -1.04
RTFDC1-209ENST00000487211 PPM1HQ9ULR3 514 aa8.58□□□□□ -1.04
RTFDC1-209ENST00000487211 TRIM33Q9UPN9 1127 aa8.58□□□□□ -1.04
RTFDC1-209ENST00000487211 FBXO24O75426 580 aa8.57□□□□□ -1.04
RTFDC1-209ENST00000487211 RGS9O75916 674 aaPredicted RBP8.57□□□□□ -1.04
RTFDC1-209ENST00000487211 EPXP11678 715 aa8.57□□□□□ -1.04
RTFDC1-209ENST00000487211 PTPRAP18433 802 aa8.57□□□□□ -1.04
RTFDC1-209ENST00000487211 PTPN12Q05209 780 aaKnown RBP8.57□□□□□ -1.04
RTFDC1-209ENST00000487211 TPTE2Q6XPS3 522 aa8.57□□□□□ -1.04
RTFDC1-209ENST00000487211 HS2ST1Q7LGA3 356 aa8.57□□□□□ -1.04
RTFDC1-209ENST00000487211 BSNDQ8WZ55 320 aa8.57□□□□□ -1.04
RTFDC1-209ENST00000487211 LACRTQ9GZZ8 138 aa8.57□□□□□ -1.04
RTFDC1-209ENST00000487211 MUC3BQ9H195 1237 aa8.57□□□□□ -1.04
RTFDC1-209ENST00000487211 GGT7Q9UJ14 662 aa8.57□□□□□ -1.04
RTFDC1-209ENST00000487211 ARHGEF28Q8N1W1 1705 aaKnown RBP8.57□□□□□ -1.04
RTFDC1-209ENST00000487211 FAM177BA6PVY3 158 aa8.56□□□□□ -1.04
RTFDC1-209ENST00000487211 HSPA5P11021 654 aaKnown RBP8.56□□□□□ -1.04
RTFDC1-209ENST00000487211 CCDC85BQ15834 202 aaPredicted RBP8.56□□□□□ -1.04
RTFDC1-209ENST00000487211 GDF6Q6KF10 455 aaPredicted RBP8.56□□□□□ -1.04
RTFDC1-209ENST00000487211 ADAMTSL4Q6UY14 1074 aa8.56□□□□□ -1.04
RTFDC1-209ENST00000487211 C1orf229Q6ZS94 237 aaPredicted RBP8.56□□□□□ -1.04
RTFDC1-209ENST00000487211 ZNF576Q9H609 170 aa8.56□□□□□ -1.04
RTFDC1-209ENST00000487211 USP47Q96K76 1375 aa8.56□□□□□ -1.04
RTFDC1-209ENST00000487211 CDC42BPGQ6DT37 1551 aa8.56□□□□□ -1.04
RTFDC1-209ENST00000487211 EVC2Q86UK5 1308 aa8.55□□□□□ -1.04
RTFDC1-209ENST00000487211 RAD51AP2Q09MP3 1159 aa8.55□□□□□ -1.04
RTFDC1-209ENST00000487211 KRT28Q7Z3Y7 464 aa8.55□□□□□ -1.04
RTFDC1-209ENST00000487211 GALNT6Q8NCL4 622 aa8.55□□□□□ -1.04
RTFDC1-209ENST00000487211 EDARADDQ8WWZ3 215 aa8.55□□□□□ -1.04
RTFDC1-209ENST00000487211 JPH1Q9HDC5 661 aaPredicted RBP8.55□□□□□ -1.04
RTFDC1-209ENST00000487211 STARD13Q9Y3M8 1113 aa8.55□□□□□ -1.04
RTFDC1-209ENST00000487211 EIF3AQ14152 1382 aaKnown RBP8.55□□□□□ -1.04
RTFDC1-209ENST00000487211 SBNO2Q9Y2G9 1366 aa8.54□□□□□ -1.04
RTFDC1-209ENST00000487211 GMPRP36959 345 aa8.54□□□□□ -1.04
RTFDC1-209ENST00000487211 ZNF394Q53GI3 561 aa8.54□□□□□ -1.04
RTFDC1-209ENST00000487211 ANKRD24Q8TF21 1146 aa8.54□□□□□ -1.04
RTFDC1-209ENST00000487211 TTC9Q92623 222 aa8.54□□□□□ -1.04
RTFDC1-209ENST00000487211 LRRC59Q96AG4 307 aaKnown RBP8.54□□□□□ -1.04
RTFDC1-209ENST00000487211 NOC4LQ9BVI4 516 aaKnown RBP8.54□□□□□ -1.04
RTFDC1-209ENST00000487211 CEP44Q9C0F1 390 aa8.54□□□□□ -1.04
RTFDC1-209ENST00000487211 SH2B1Q9NRF2 756 aaPredicted RBP8.54□□□□□ -1.04
RTFDC1-209ENST00000487211 GPN3Q9UHW5 284 aaPredicted RBP8.54□□□□□ -1.04
RTFDC1-209ENST00000487211 BRWD3Q6RI45 1802 aa8.54□□□□□ -1.04
RTFDC1-209ENST00000487211 ANKARQ7Z5J8 1434 aa8.54□□□□□ -1.04
RTFDC1-209ENST00000487211 PCNTO95613 3336 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 ALBP02768 609 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 CDC27P30260 824 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 ZNF157P51786 506 aaPredicted RBP8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 ZC3H6P61129 1189 aaKnown RBP8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 FAAP100Q0VG06 881 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 RPS26P11Q5JNZ5 115 aaPredicted RBP8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 SV2BQ7L1I2 683 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 USP48Q86UV5 1035 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 NGDNQ8NEJ9 315 aaKnown RBP8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 PUS7Q96PZ0 661 aaKnown RBP8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 TGIF2Q9GZN2 237 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 ADAM19Q9H013 955 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 CLEC4MQ9H2X3 399 aaPredicted RBP8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 SLC12A5Q9H2X9 1139 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 CCSER2Q9H7U1 834 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 SOX13Q9UN79 622 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 PCDHGB7Q9Y5F8 929 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 SHANK3Q9BYB0 1731 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 TULP4Q9NRJ4 1543 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 ACEP12821 1306 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 NPHP3Q7Z494 1330 aa8.53□□□□□ -1.04
RTFDC1-209ENST00000487211 ADGRB2O60241 1585 aa8.52□□□□□ -1.04
RTFDC1-209ENST00000487211 FMN2Q9NZ56 1722 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 AHDC1Q5TGY3 1603 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms