RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 RLFQ13129 1914 aa15.54■□□□□ 0.08
ATPAF1-205ENST00000487193 MYCNP04198 464 aaPredicted RBP15.53■□□□□ 0.08
ATPAF1-205ENST00000487193 SLURP2P0DP57 97 aa15.53■□□□□ 0.08
ATPAF1-205ENST00000487193 GCKRQ14397 625 aa15.53■□□□□ 0.08
ATPAF1-205ENST00000487193 AAK1Q2M2I8 961 aa15.53■□□□□ 0.08
ATPAF1-205ENST00000487193 CDC42EP5Q6NZY7 148 aa15.53■□□□□ 0.08
ATPAF1-205ENST00000487193 HHIPL2Q6UWX4 724 aa15.53■□□□□ 0.08
ATPAF1-205ENST00000487193 SOCS4Q8WXH5 440 aa15.53■□□□□ 0.08
ATPAF1-205ENST00000487193 LPAR1Q92633 364 aa15.53■□□□□ 0.08
ATPAF1-205ENST00000487193 ASCC2Q9H1I8 757 aaPredicted RBP15.53■□□□□ 0.08
ATPAF1-205ENST00000487193 DDX20Q9UHI6 824 aaKnown RBP15.53■□□□□ 0.08
ATPAF1-205ENST00000487193 GRXCR1A8MXD5 290 aa15.52■□□□□ 0.08
ATPAF1-205ENST00000487193 RGS2P41220 211 aa15.52■□□□□ 0.08
ATPAF1-205ENST00000487193 CASP7P55210 303 aa15.52■□□□□ 0.08
ATPAF1-205ENST00000487193 TRIM26Q12899 539 aaPredicted RBP15.52■□□□□ 0.08
ATPAF1-205ENST00000487193 UBE4AQ14139 1066 aa15.52■□□□□ 0.08
ATPAF1-205ENST00000487193 SKIV2LQ15477 1246 aaKnown RBP15.52■□□□□ 0.08
ATPAF1-205ENST00000487193 TAF7LQ5H9L4 462 aa15.52■□□□□ 0.08
ATPAF1-205ENST00000487193 PROCA1Q8NCQ7 364 aaPredicted RBP15.52■□□□□ 0.08
ATPAF1-205ENST00000487193 MBIPQ9NS73 344 aa15.52■□□□□ 0.08
ATPAF1-205ENST00000487193 FAM198AQ9UFP1 575 aa15.52■□□□□ 0.08
ATPAF1-205ENST00000487193 TRIM35Q9UPQ4 493 aa15.52■□□□□ 0.08
ATPAF1-205ENST00000487193 DAGLAQ9Y4D2 1042 aa15.52■□□□□ 0.08
ATPAF1-205ENST00000487193 NHLH1Q02575 133 aa15.51■□□□□ 0.07
ATPAF1-205ENST00000487193 PABPC4Q13310 644 aaKnown RBP eCLIP15.51■□□□□ 0.07
ATPAF1-205ENST00000487193 CCAR1Q8IX12 1150 aaKnown RBP15.51■□□□□ 0.07
ATPAF1-205ENST00000487193 USP6NLQ92738 828 aa15.51■□□□□ 0.07
ATPAF1-205ENST00000487193 PBX4Q9BYU1 374 aa15.51■□□□□ 0.07
ATPAF1-205ENST00000487193 MORF4L1Q9UBU8 362 aa15.51■□□□□ 0.07
ATPAF1-205ENST00000487193 REV3LO60673 3130 aa15.51■□□□□ 0.07
ATPAF1-205ENST00000487193 MAST3O60307 1309 aa15.5■□□□□ 0.07
ATPAF1-205ENST00000487193 CACNA1AO00555 2505 aa15.5■□□□□ 0.07
ATPAF1-205ENST00000487193 HMGCS2P54868 508 aa15.5■□□□□ 0.07
ATPAF1-205ENST00000487193 FPGSQ05932 587 aa15.5■□□□□ 0.07
ATPAF1-205ENST00000487193 SPP2Q13103 211 aa15.5■□□□□ 0.07
ATPAF1-205ENST00000487193 FERMT2Q96AC1 680 aa15.5■□□□□ 0.07
ATPAF1-205ENST00000487193 UIMC1Q96RL1 719 aa15.5■□□□□ 0.07
ATPAF1-205ENST00000487193 USP40Q9NVE5 1235 aa15.5■□□□□ 0.07
ATPAF1-205ENST00000487193 DOCK1Q14185 1865 aa15.49■□□□□ 0.07
ATPAF1-205ENST00000487193 KBTBD13C9JR72 458 aa15.49■□□□□ 0.07
ATPAF1-205ENST00000487193 CTNND1O60716 968 aaKnown RBP15.49■□□□□ 0.07
ATPAF1-205ENST00000487193 RAG1P15918 1043 aa15.49■□□□□ 0.07
ATPAF1-205ENST00000487193 FOXO4P98177 505 aa15.49■□□□□ 0.07
ATPAF1-205ENST00000487193 TLE2Q04725 743 aa15.49■□□□□ 0.07
ATPAF1-205ENST00000487193 MFSD14CQ5VZR4 134 aa15.49■□□□□ 0.07
ATPAF1-205ENST00000487193 FBXO33Q7Z6M2 555 aa15.49■□□□□ 0.07
ATPAF1-205ENST00000487193 ZSCAN29Q8IWY8 852 aaPredicted RBP15.49■□□□□ 0.07
ATPAF1-205ENST00000487193 CCDC146Q8IYE0 955 aa15.49■□□□□ 0.07
ATPAF1-205ENST00000487193 GPRC5AQ8NFJ5 357 aa15.49■□□□□ 0.07
ATPAF1-205ENST00000487193 FLRT1Q9NZU1 646 aa15.49■□□□□ 0.07
ATPAF1-205ENST00000487193 ADCYAP1R1P41586 468 aa15.48■□□□□ 0.07
ATPAF1-205ENST00000487193 CCDC57Q2TAC2 916 aa15.48■□□□□ 0.07
ATPAF1-205ENST00000487193 Q3C1V9 767 aa15.48■□□□□ 0.07
ATPAF1-205ENST00000487193 MORN1Q5T089 497 aa15.48■□□□□ 0.07
ATPAF1-205ENST00000487193 CCDC30Q5VVM6 783 aa15.48■□□□□ 0.07
ATPAF1-205ENST00000487193 ANO1Q5XXA6 986 aa15.48■□□□□ 0.07
ATPAF1-205ENST00000487193 GPR142Q7Z601 462 aa15.48■□□□□ 0.07
ATPAF1-205ENST00000487193 ARRDC4Q8NCT1 418 aa15.48■□□□□ 0.07
ATPAF1-205ENST00000487193 APBA2Q99767 749 aa15.48■□□□□ 0.07
ATPAF1-205ENST00000487193 CWC22Q9HCG8 908 aaKnown RBP15.48■□□□□ 0.07
ATPAF1-205ENST00000487193 TXNRD2Q9NNW7 524 aa15.48■□□□□ 0.07
ATPAF1-205ENST00000487193 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
ATPAF1-205ENST00000487193 TACC3Q9Y6A5 838 aa15.48■□□□□ 0.07
ATPAF1-205ENST00000487193 DOCK2Q92608 1830 aa15.47■□□□□ 0.07
ATPAF1-205ENST00000487193 MSCO60682 206 aa15.47■□□□□ 0.07
ATPAF1-205ENST00000487193 MAPK4P31152 587 aa15.47■□□□□ 0.07
ATPAF1-205ENST00000487193 PLEKHH3Q7Z736 793 aa15.47■□□□□ 0.07
ATPAF1-205ENST00000487193 EDC3Q96F86 508 aaKnown RBP15.47■□□□□ 0.07
ATPAF1-205ENST00000487193 PORCNQ9H237 461 aa15.47■□□□□ 0.07
ATPAF1-205ENST00000487193 NDUFB9Q9Y6M9 179 aa15.47■□□□□ 0.07
ATPAF1-205ENST00000487193 ATRNL1Q5VV63 1379 aa15.47■□□□□ 0.07
ATPAF1-205ENST00000487193 PI4K2BG5E9Z4 385 aa15.46■□□□□ 0.07
ATPAF1-205ENST00000487193 CLTBP09497 229 aa15.46■□□□□ 0.07
ATPAF1-205ENST00000487193 IRX3P78415 501 aaPredicted RBP15.46■□□□□ 0.07
ATPAF1-205ENST00000487193 SNX17Q15036 470 aa15.46■□□□□ 0.07
ATPAF1-205ENST00000487193 DIXDC1Q155Q3 683 aa15.46■□□□□ 0.07
ATPAF1-205ENST00000487193 CAVIN4Q5BKX8 364 aa15.46■□□□□ 0.07
ATPAF1-205ENST00000487193 LMBR1LQ6UX01 489 aa15.46■□□□□ 0.07
ATPAF1-205ENST00000487193 C8orf58Q8NAV2 365 aa15.46■□□□□ 0.07
ATPAF1-205ENST00000487193 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.46■□□□□ 0.07
ATPAF1-205ENST00000487193 LOC285556D6RIA3 1793 aa15.45■□□□□ 0.06
ATPAF1-205ENST00000487193 PRR33A8MZF0 331 aa15.45■□□□□ 0.06
ATPAF1-205ENST00000487193 TLL1O43897 1013 aa15.45■□□□□ 0.06
ATPAF1-205ENST00000487193 ATP2B2Q01814 1243 aa15.45■□□□□ 0.06
ATPAF1-205ENST00000487193 SH3BP5LQ7L8J4 393 aa15.45■□□□□ 0.06
ATPAF1-205ENST00000487193 ZNF280CQ8ND82 737 aa15.45■□□□□ 0.06
ATPAF1-205ENST00000487193 TRPV1Q8NER1 839 aa15.45■□□□□ 0.06
ATPAF1-205ENST00000487193 FBXL18Q96ME1 805 aa15.45■□□□□ 0.06
ATPAF1-205ENST00000487193 PUS3Q9BZE2 481 aaKnown RBP15.45■□□□□ 0.06
ATPAF1-205ENST00000487193 NKX2-4Q9H2Z4 354 aa15.45■□□□□ 0.06
ATPAF1-205ENST00000487193 MYH16Q9H6N6 1097 aa15.45■□□□□ 0.06
ATPAF1-205ENST00000487193 SUGT1Q9Y2Z0 365 aa15.45■□□□□ 0.06
ATPAF1-205ENST00000487193 ERC2O15083 957 aa15.44■□□□□ 0.06
ATPAF1-205ENST00000487193 CYP2C19P33261 490 aa15.44■□□□□ 0.06
ATPAF1-205ENST00000487193 RGS3P49796 1198 aa15.44■□□□□ 0.06
ATPAF1-205ENST00000487193 MAP2K5Q13163 448 aa15.44■□□□□ 0.06
ATPAF1-205ENST00000487193 PAGR1Q9BTK6 254 aa15.44■□□□□ 0.06
ATPAF1-205ENST00000487193 TMEM39AQ9NV64 488 aa15.44■□□□□ 0.06
ATPAF1-205ENST00000487193 RBPJLQ9UBG7 517 aa15.44■□□□□ 0.06
ATPAF1-205ENST00000487193 MSRAQ9UJ68 235 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms