RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 RRP1BQ14684 758 aaKnown RBP18.61■□□□□ 0.57
PFDN4-204ENST00000487129 ZSCAN29Q8IWY8 852 aaPredicted RBP18.61■□□□□ 0.57
PFDN4-204ENST00000487129 C11orf49Q9H6J7 331 aa18.61■□□□□ 0.57
PFDN4-204ENST00000487129 PNMA3Q9UL41 463 aa18.61■□□□□ 0.57
PFDN4-204ENST00000487129 RASGRF1Q13972 1273 aa18.6■□□□□ 0.57
PFDN4-204ENST00000487129 SIL1Q9H173 461 aa18.6■□□□□ 0.57
PFDN4-204ENST00000487129 HMX1Q9NP08 348 aaPredicted RBP18.6■□□□□ 0.57
PFDN4-204ENST00000487129 GNL3LQ9NVN8 582 aaKnown RBP18.6■□□□□ 0.57
PFDN4-204ENST00000487129 FBXO3Q9UK99 471 aa18.6■□□□□ 0.57
PFDN4-204ENST00000487129 COL2A1P02458 1487 aaPredicted RBP18.59■□□□□ 0.57
PFDN4-204ENST00000487129 PDS5AQ29RF7 1337 aaKnown RBP18.59■□□□□ 0.57
PFDN4-204ENST00000487129 COL6A1P12109 1028 aa18.59■□□□□ 0.57
PFDN4-204ENST00000487129 BTDP43251 543 aa18.59■□□□□ 0.57
PFDN4-204ENST00000487129 GCLCP48506 637 aaPredicted RBP18.59■□□□□ 0.57
PFDN4-204ENST00000487129 SPP2Q13103 211 aa18.59■□□□□ 0.57
PFDN4-204ENST00000487129 PICALMQ13492 652 aa18.59■□□□□ 0.57
PFDN4-204ENST00000487129 CCDC102BQ68D86 513 aa18.59■□□□□ 0.57
PFDN4-204ENST00000487129 COL25A1Q9BXS0 654 aaPredicted RBP18.59■□□□□ 0.57
PFDN4-204ENST00000487129 ASCC2Q9H1I8 757 aaPredicted RBP18.59■□□□□ 0.57
PFDN4-204ENST00000487129 LAMA2P24043 3122 aaKnown RBP18.58■□□□□ 0.57
PFDN4-204ENST00000487129 VCANP13611 3396 aa18.58■□□□□ 0.57
PFDN4-204ENST00000487129 MROH7-TTC4A0A0A0MT08 1334 aa18.58■□□□□ 0.57
PFDN4-204ENST00000487129 NPM3O75607 178 aaKnown RBP18.58■□□□□ 0.56
PFDN4-204ENST00000487129 HMGCS2P54868 508 aa18.58■□□□□ 0.56
PFDN4-204ENST00000487129 CEP126Q9P2H0 1117 aa18.58■□□□□ 0.56
PFDN4-204ENST00000487129 MORF4L1Q9UBU8 362 aa18.58■□□□□ 0.56
PFDN4-204ENST00000487129 GPR75-ASB3A0A0A6YYF3 556 aa18.57■□□□□ 0.56
PFDN4-204ENST00000487129 PEX10O60683 326 aa18.57■□□□□ 0.56
PFDN4-204ENST00000487129 SH3D19Q5HYK7 790 aa18.57■□□□□ 0.56
PFDN4-204ENST00000487129 DZIP1Q86YF9 867 aaKnown RBP18.57■□□□□ 0.56
PFDN4-204ENST00000487129 ZGPATQ8N5A5 531 aaKnown RBP18.57■□□□□ 0.56
PFDN4-204ENST00000487129 ZNF280CQ8ND82 737 aa18.57■□□□□ 0.56
PFDN4-204ENST00000487129 SSH1Q8WYL5 1049 aa18.57■□□□□ 0.56
PFDN4-204ENST00000487129 OSBPL5Q9H0X9 879 aaPredicted RBP18.57■□□□□ 0.56
PFDN4-204ENST00000487129 UBE2OQ9C0C9 1292 aaKnown RBP18.56■□□□□ 0.56
PFDN4-204ENST00000487129 PA2G4Q9UQ80 394 aaKnown RBP18.56■□□□□ 0.56
PFDN4-204ENST00000487129 PRKAR2AP13861 404 aaKnown RBP18.55■□□□□ 0.56
PFDN4-204ENST00000487129 MECOMQ03112 1051 aa18.55■□□□□ 0.56
PFDN4-204ENST00000487129 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.55■□□□□ 0.56
PFDN4-204ENST00000487129 TXNRD2Q9NNW7 524 aa18.55■□□□□ 0.56
PFDN4-204ENST00000487129 ABCF2Q9UG63 623 aa18.55■□□□□ 0.56
PFDN4-204ENST00000487129 ATAD5Q96QE3 1844 aa18.55■□□□□ 0.56
PFDN4-204ENST00000487129 EYSQ5T1H1 3165 aa18.54■□□□□ 0.56
PFDN4-204ENST00000487129 POTEB2H3BUK9 544 aa18.54■□□□□ 0.56
PFDN4-204ENST00000487129 CYP2B6P20813 491 aa18.54■□□□□ 0.56
PFDN4-204ENST00000487129 CAP2P40123 477 aa18.54■□□□□ 0.56
PFDN4-204ENST00000487129 IL15P40933 162 aaPredicted RBP18.54■□□□□ 0.56
PFDN4-204ENST00000487129 LRRC26Q2I0M4 334 aa18.54■□□□□ 0.56
PFDN4-204ENST00000487129 LHX8Q68G74 356 aa18.54■□□□□ 0.56
PFDN4-204ENST00000487129 POTEEQ6S8J3 1075 aa18.54■□□□□ 0.56
PFDN4-204ENST00000487129 USP6NLQ92738 828 aa18.54■□□□□ 0.56
PFDN4-204ENST00000487129 GUCD1Q96NT3 240 aa18.54■□□□□ 0.56
PFDN4-204ENST00000487129 SIPA1L1O43166 1804 aa18.53■□□□□ 0.56
PFDN4-204ENST00000487129 XRCC5P13010 732 aaKnown RBP18.53■□□□□ 0.56
PFDN4-204ENST00000487129 TIMM10P62072 90 aa18.53■□□□□ 0.56
PFDN4-204ENST00000487129 JAG1P78504 1218 aa18.53■□□□□ 0.56
PFDN4-204ENST00000487129 SLF2Q8IX21 1173 aa18.53■□□□□ 0.56
PFDN4-204ENST00000487129 TBC1D2Q9BYX2 928 aa18.53■□□□□ 0.56
PFDN4-204ENST00000487129 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.53■□□□□ 0.56
PFDN4-204ENST00000487129 SPTBN5Q9NRC6 3674 aaKnown RBP18.53■□□□□ 0.56
PFDN4-204ENST00000487129 USP17L5A8MUK1 530 aa18.52■□□□□ 0.56
PFDN4-204ENST00000487129 CACNB2Q08289 660 aaPredicted RBP18.52■□□□□ 0.56
PFDN4-204ENST00000487129 PABPC4Q13310 644 aaKnown RBP eCLIP18.52■□□□□ 0.56
PFDN4-204ENST00000487129 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.52■□□□□ 0.56
PFDN4-204ENST00000487129 COPRSQ9NQ92 184 aa18.52■□□□□ 0.56
PFDN4-204ENST00000487129 DNAH12Q6ZR08 3092 aa18.51■□□□□ 0.55
PFDN4-204ENST00000487129 HOXA7P31268 230 aaPredicted RBP18.51■□□□□ 0.55
PFDN4-204ENST00000487129 FAM109BQ6ICB4 259 aaPredicted RBP18.51■□□□□ 0.55
PFDN4-204ENST00000487129 PI16Q6UXB8 463 aa18.51■□□□□ 0.55
PFDN4-204ENST00000487129 P2RX7Q99572 595 aaKnown RBP18.51■□□□□ 0.55
PFDN4-204ENST00000487129 WDR18Q9BV38 432 aa18.51■□□□□ 0.55
PFDN4-204ENST00000487129 UBTFL1P0CB47 393 aaPredicted RBP18.5■□□□□ 0.55
PFDN4-204ENST00000487129 CCND3P30281 292 aaPredicted RBP18.5■□□□□ 0.55
PFDN4-204ENST00000487129 MDM2Q00987 491 aaPredicted RBP18.5■□□□□ 0.55
PFDN4-204ENST00000487129 MTMR2Q13614 643 aa18.5■□□□□ 0.55
PFDN4-204ENST00000487129 CCL14Q16627 93 aa18.5■□□□□ 0.55
PFDN4-204ENST00000487129 SHROOM1Q2M3G4 852 aaPredicted RBP18.5■□□□□ 0.55
PFDN4-204ENST00000487129 SPTY2D1Q68D10 685 aaPredicted RBP18.5■□□□□ 0.55
PFDN4-204ENST00000487129 SOCS4Q8WXH5 440 aa18.5■□□□□ 0.55
PFDN4-204ENST00000487129 NSUN4Q96CB9 384 aaKnown RBP18.5■□□□□ 0.55
PFDN4-204ENST00000487129 NUDT12Q9BQG2 462 aa18.5■□□□□ 0.55
PFDN4-204ENST00000487129 DNAJC18Q9H819 358 aa18.5■□□□□ 0.55
PFDN4-204ENST00000487129 RBPJLQ9UBG7 517 aa18.5■□□□□ 0.55
PFDN4-204ENST00000487129 A0A1B0GUL7 405 aa18.49■□□□□ 0.55
PFDN4-204ENST00000487129 MAP4K4O95819 1239 aaPredicted RBP18.49■□□□□ 0.55
PFDN4-204ENST00000487129 HERVK_113P62684 666 aa18.49■□□□□ 0.55
PFDN4-204ENST00000487129 Q3C1V9 767 aa18.49■□□□□ 0.55
PFDN4-204ENST00000487129 MORN1Q5T089 497 aa18.49■□□□□ 0.55
PFDN4-204ENST00000487129 ERICH6Q7L0X2 663 aa18.49■□□□□ 0.55
PFDN4-204ENST00000487129 XAGE2Q96GT9 111 aa18.49■□□□□ 0.55
PFDN4-204ENST00000487129 PORCNQ9H237 461 aa18.49■□□□□ 0.55
PFDN4-204ENST00000487129 HMG20BQ9P0W2 317 aa18.49■□□□□ 0.55
PFDN4-204ENST00000487129 MAST2Q6P0Q8 1798 aa18.49■□□□□ 0.55
PFDN4-204ENST00000487129 ZKSCAN1P17029 563 aaPredicted RBP18.48■□□□□ 0.55
PFDN4-204ENST00000487129 BACE1P56817 501 aa18.48■□□□□ 0.55
PFDN4-204ENST00000487129 IRX3P78415 501 aaPredicted RBP18.48■□□□□ 0.55
PFDN4-204ENST00000487129 TBC1D9Q6ZT07 1266 aa18.48■□□□□ 0.55
PFDN4-204ENST00000487129 GPRC5AQ8NFJ5 357 aa18.48■□□□□ 0.55
PFDN4-204ENST00000487129 HERC5Q9UII4 1024 aaKnown RBP18.48■□□□□ 0.55
PFDN4-204ENST00000487129 FRMPD3Q5JV73 1810 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms