RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 TGFBRAP1Q8WUH2 860 aa23.27■■□□□ 1.32
CLIP2-206ENST00000487091 HTTP42858 3142 aa23.27■■□□□ 1.32
CLIP2-206ENST00000487091 FOCADQ5VW36 1801 aa23.26■■□□□ 1.31
CLIP2-206ENST00000487091 CDK5RAP2Q96SN8 1893 aa23.26■■□□□ 1.31
CLIP2-206ENST00000487091 FAM196BA6NMK8 535 aa23.26■■□□□ 1.31
CLIP2-206ENST00000487091 C20orf194Q5TEA3 1177 aa23.26■■□□□ 1.31
CLIP2-206ENST00000487091 PARK7Q99497 189 aaKnown RBP23.26■■□□□ 1.31
CLIP2-206ENST00000487091 TBC1D2Q9BYX2 928 aa23.26■■□□□ 1.31
CLIP2-206ENST00000487091 ANTXR1Q9H6X2 564 aa23.26■■□□□ 1.31
CLIP2-206ENST00000487091 NDUFB9Q9Y6M9 179 aa23.26■■□□□ 1.31
CLIP2-206ENST00000487091 FLT1P17948 1338 aa23.26■■□□□ 1.31
CLIP2-206ENST00000487091 ADGRA2Q96PE1 1338 aa23.26■■□□□ 1.31
CLIP2-206ENST00000487091 PTPRFP10586 1907 aa23.25■■□□□ 1.31
CLIP2-206ENST00000487091 APBB1O00213 710 aa23.25■■□□□ 1.31
CLIP2-206ENST00000487091 GNRH1P01148 92 aa23.25■■□□□ 1.31
CLIP2-206ENST00000487091 CAP2P40123 477 aa23.25■■□□□ 1.31
CLIP2-206ENST00000487091 TTF1Q15361 905 aaPredicted RBP23.25■■□□□ 1.31
CLIP2-206ENST00000487091 METTL16Q86W50 562 aaKnown RBP23.25■■□□□ 1.31
CLIP2-206ENST00000487091 FOXP4Q8IVH2 680 aaPredicted RBP23.25■■□□□ 1.31
CLIP2-206ENST00000487091 MAPKAPK5Q8IW41 473 aa23.25■■□□□ 1.31
CLIP2-206ENST00000487091 MAGEB6Q8N7X4 407 aa23.25■■□□□ 1.31
CLIP2-206ENST00000487091 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.25■■□□□ 1.31
CLIP2-206ENST00000487091 SLC45A1Q9Y2W3 748 aa23.25■■□□□ 1.31
CLIP2-206ENST00000487091 IFIT2P09913 472 aaKnown RBP23.24■■□□□ 1.31
CLIP2-206ENST00000487091 ARMC5Q96C12 935 aa23.24■■□□□ 1.31
CLIP2-206ENST00000487091 CPA4Q9UI42 421 aa23.24■■□□□ 1.31
CLIP2-206ENST00000487091 DYNLL1P63167 89 aaKnown RBP23.23■■□□□ 1.31
CLIP2-206ENST00000487091 GADL1Q6ZQY3 521 aa23.23■■□□□ 1.31
CLIP2-206ENST00000487091 ARHGAP39Q9C0H5 1083 aa23.23■■□□□ 1.31
CLIP2-206ENST00000487091 TRIM75PA6NK02 468 aa23.22■■□□□ 1.31
CLIP2-206ENST00000487091 PRMT2P55345 433 aa23.22■■□□□ 1.31
CLIP2-206ENST00000487091 RRP1BQ14684 758 aaKnown RBP23.22■■□□□ 1.31
CLIP2-206ENST00000487091 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.22■■□□□ 1.31
CLIP2-206ENST00000487091 SIPA1L1O43166 1804 aa23.22■■□□□ 1.31
CLIP2-206ENST00000487091 CCDC84Q86UT8 332 aaPredicted RBP23.21■■□□□ 1.31
CLIP2-206ENST00000487091 MIGA1Q8NAN2 632 aa23.21■■□□□ 1.31
CLIP2-206ENST00000487091 ZNF280CQ8ND82 737 aa23.21■■□□□ 1.31
CLIP2-206ENST00000487091 PALD1Q9ULE6 856 aa23.21■■□□□ 1.31
CLIP2-206ENST00000487091 PTCH2Q9Y6C5 1203 aa23.21■■□□□ 1.31
CLIP2-206ENST00000487091 ATAD5Q96QE3 1844 aa23.21■■□□□ 1.31
CLIP2-206ENST00000487091 USP17L5A8MUK1 530 aa23.2■■□□□ 1.3
CLIP2-206ENST00000487091 HLA-DOAP06340 250 aa23.2■■□□□ 1.3
CLIP2-206ENST00000487091 CYP2C8P10632 490 aa23.2■■□□□ 1.3
CLIP2-206ENST00000487091 BCRP11274 1271 aa23.2■■□□□ 1.3
CLIP2-206ENST00000487091 SPP2Q13103 211 aa23.2■■□□□ 1.3
CLIP2-206ENST00000487091 NBPF11Q86T75 865 aa23.2■■□□□ 1.3
CLIP2-206ENST00000487091 CRACR2BQ8N4Y2 399 aaPredicted RBP23.2■■□□□ 1.3
CLIP2-206ENST00000487091 PROCA1Q8NCQ7 364 aaPredicted RBP23.2■■□□□ 1.3
CLIP2-206ENST00000487091 GINM1Q9NU53 330 aa23.2■■□□□ 1.3
CLIP2-206ENST00000487091 AGTPBP1Q9UPW5 1226 aa23.2■■□□□ 1.3
CLIP2-206ENST00000487091 KIAA0100Q14667 2235 aaKnown RBP23.2■■□□□ 1.3
CLIP2-206ENST00000487091 TNRC18O15417 2968 aaPredicted RBP23.19■■□□□ 1.3
CLIP2-206ENST00000487091 ASNSP08243 561 aa23.19■■□□□ 1.3
CLIP2-206ENST00000487091 PSMC4P43686 418 aa23.19■■□□□ 1.3
CLIP2-206ENST00000487091 USP5P45974 858 aa23.19■■□□□ 1.3
CLIP2-206ENST00000487091 TRIM34Q9BYJ4 488 aa23.19■■□□□ 1.3
CLIP2-206ENST00000487091 DNAJC18Q9H819 358 aa23.19■■□□□ 1.3
CLIP2-206ENST00000487091 AS3MTQ9HBK9 375 aa23.19■■□□□ 1.3
CLIP2-206ENST00000487091 PDE4DIPQ5VU43 2346 aa23.19■■□□□ 1.3
CLIP2-206ENST00000487091 CENPFP49454 3210 aa23.18■■□□□ 1.3
CLIP2-206ENST00000487091 MYH1P12882 1939 aa23.18■■□□□ 1.3
CLIP2-206ENST00000487091 ZSWIM8A7E2V4 1837 aa23.18■■□□□ 1.3
CLIP2-206ENST00000487091 HOXD10P28358 340 aa23.18■■□□□ 1.3
CLIP2-206ENST00000487091 SLC9C1Q4G0N8 1177 aa23.18■■□□□ 1.3
CLIP2-206ENST00000487091 SLC9C2Q5TAH2 1124 aa23.18■■□□□ 1.3
CLIP2-206ENST00000487091 WDR18Q9BV38 432 aa23.18■■□□□ 1.3
CLIP2-206ENST00000487091 SAP30BPQ9UHR5 308 aaKnown RBP23.18■■□□□ 1.3
CLIP2-206ENST00000487091 PDE6AP16499 860 aa23.17■■□□□ 1.3
CLIP2-206ENST00000487091 ATP5JP18859 108 aa23.17■■□□□ 1.3
CLIP2-206ENST00000487091 CTGFP29279 349 aa23.17■■□□□ 1.3
CLIP2-206ENST00000487091 SH3D19Q5HYK7 790 aa23.17■■□□□ 1.3
CLIP2-206ENST00000487091 ZNF333Q96JL9 665 aa23.17■■□□□ 1.3
CLIP2-206ENST00000487091 TRIM47Q96LD4 638 aa23.17■■□□□ 1.3
CLIP2-206ENST00000487091 DNAJC2Q99543 621 aaKnown RBP23.17■■□□□ 1.3
CLIP2-206ENST00000487091 RIOK1Q9BRS2 568 aaKnown RBP23.17■■□□□ 1.3
CLIP2-206ENST00000487091 LRRCC1Q9C099 1032 aa23.17■■□□□ 1.3
CLIP2-206ENST00000487091 MAGEB6P1A0A0J9YX57 407 aa23.16■■□□□ 1.3
CLIP2-206ENST00000487091 GOLIM4O00461 696 aa23.16■■□□□ 1.3
CLIP2-206ENST00000487091 FMNL1O95466 1100 aaPredicted RBP23.16■■□□□ 1.3
CLIP2-206ENST00000487091 SRRDQ9UH36 339 aa23.16■■□□□ 1.3
CLIP2-206ENST00000487091 PNMA3Q9UL41 463 aa23.16■■□□□ 1.3
CLIP2-206ENST00000487091 OSBPP22059 807 aa23.15■■□□□ 1.3
CLIP2-206ENST00000487091 FCGRTP55899 365 aa23.15■■□□□ 1.3
CLIP2-206ENST00000487091 TREML2Q5T2D2 321 aa23.15■■□□□ 1.3
CLIP2-206ENST00000487091 TTC6Q86TZ1 520 aa23.15■■□□□ 1.3
CLIP2-206ENST00000487091 SMCR8Q8TEV9 937 aaPredicted RBP23.15■■□□□ 1.3
CLIP2-206ENST00000487091 BCL11AQ9H165 835 aa23.15■■□□□ 1.3
CLIP2-206ENST00000487091 EHD4Q9H223 541 aa23.15■■□□□ 1.3
CLIP2-206ENST00000487091 LOC285556D6RIA3 1793 aa23.14■■□□□ 1.3
CLIP2-206ENST00000487091 RBBP6Q7Z6E9 1792 aaKnown RBP23.14■■□□□ 1.3
CLIP2-206ENST00000487091 POTEFA5A3E0 1075 aa23.14■■□□□ 1.29
CLIP2-206ENST00000487091 HMGCS2P54868 508 aa23.14■■□□□ 1.29
CLIP2-206ENST00000487091 JAG1P78504 1218 aa23.14■■□□□ 1.29
CLIP2-206ENST00000487091 PABPC4Q13310 644 aaKnown RBP eCLIP23.14■■□□□ 1.29
CLIP2-206ENST00000487091 BOLA2Q9H3K6 86 aa23.14■■□□□ 1.29
CLIP2-206ENST00000487091 PAG1Q9NWQ8 432 aa23.14■■□□□ 1.29
CLIP2-206ENST00000487091 SERPINB13Q9UIV8 391 aa23.14■■□□□ 1.29
CLIP2-206ENST00000487091 ZNF532Q9HCE3 1301 aa23.13■■□□□ 1.29
CLIP2-206ENST00000487091 TCRBV5S4A2TA0A5A2 114 aa23.13■■□□□ 1.29
CLIP2-206ENST00000487091 TATDN1Q6P1N9 297 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms