RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 SMCR8Q8TEV9 937 aaPredicted RBP11.5□□□□□ -0.57
CCDC142-208ENST00000486335 USP6NLQ92738 828 aa11.5□□□□□ -0.57
CCDC142-208ENST00000486335 USP44Q9H0E7 712 aa11.5□□□□□ -0.57
CCDC142-208ENST00000486335 TXNRD2Q9NNW7 524 aa11.5□□□□□ -0.57
CCDC142-208ENST00000486335 HMX1Q9NP08 348 aaPredicted RBP11.5□□□□□ -0.57
CCDC142-208ENST00000486335 GAKO14976 1311 aa11.5□□□□□ -0.57
CCDC142-208ENST00000486335 DNAH12Q6ZR08 3092 aa11.49□□□□□ -0.57
CCDC142-208ENST00000486335 FAM196BA6NMK8 535 aa11.49□□□□□ -0.57
CCDC142-208ENST00000486335 CT47B1P0C2W7 299 aaPredicted RBP11.49□□□□□ -0.57
CCDC142-208ENST00000486335 RHBDL3P58872 404 aa11.49□□□□□ -0.57
CCDC142-208ENST00000486335 JAG1P78504 1218 aa11.49□□□□□ -0.57
CCDC142-208ENST00000486335 MDM2Q00987 491 aaPredicted RBP11.49□□□□□ -0.57
CCDC142-208ENST00000486335 Q3C1V9 767 aa11.49□□□□□ -0.57
CCDC142-208ENST00000486335 LPIN2Q92539 896 aa11.49□□□□□ -0.57
CCDC142-208ENST00000486335 FAM161BQ96MY7 647 aa11.49□□□□□ -0.57
CCDC142-208ENST00000486335 PICK1Q9NRD5 415 aa11.49□□□□□ -0.57
CCDC142-208ENST00000486335 RCAN3Q9UKA8 241 aa11.49□□□□□ -0.57
CCDC142-208ENST00000486335 SUPT16HQ9Y5B9 1047 aaKnown RBP11.49□□□□□ -0.57
CCDC142-208ENST00000486335 SALL1Q9NSC2 1324 aa11.49□□□□□ -0.57
CCDC142-208ENST00000486335 DDX60LQ5H9U9 1706 aaKnown RBP11.49□□□□□ -0.57
CCDC142-208ENST00000486335 EYA2O00167 538 aa11.48□□□□□ -0.57
CCDC142-208ENST00000486335 ZBTB22O15209 634 aa11.48□□□□□ -0.57
CCDC142-208ENST00000486335 TBC1D12O60347 775 aa11.48□□□□□ -0.57
CCDC142-208ENST00000486335 IFIT1P09914 478 aaKnown RBP11.48□□□□□ -0.57
CCDC142-208ENST00000486335 CYP2B6P20813 491 aa11.48□□□□□ -0.57
CCDC142-208ENST00000486335 PHKA1P46020 1223 aa11.48□□□□□ -0.57
CCDC142-208ENST00000486335 CACNB2Q08289 660 aaPredicted RBP11.48□□□□□ -0.57
CCDC142-208ENST00000486335 SPP2Q13103 211 aa11.48□□□□□ -0.57
CCDC142-208ENST00000486335 FAM163AQ96GL9 167 aaPredicted RBP11.48□□□□□ -0.57
CCDC142-208ENST00000486335 ASCC2Q9H1I8 757 aaPredicted RBP11.48□□□□□ -0.57
CCDC142-208ENST00000486335 PRDM6Q9NQX0 595 aa11.48□□□□□ -0.57
CCDC142-208ENST00000486335 MORF4L1Q9UBU8 362 aa11.48□□□□□ -0.57
CCDC142-208ENST00000486335 AK9Q5TCS8 1911 aa11.47□□□□□ -0.57
CCDC142-208ENST00000486335 LDHBP07195 334 aaKnown RBP11.47□□□□□ -0.57
CCDC142-208ENST00000486335 PRKAR2AP13861 404 aaKnown RBP11.47□□□□□ -0.57
CCDC142-208ENST00000486335 CCND3P30281 292 aaPredicted RBP11.47□□□□□ -0.57
CCDC142-208ENST00000486335 CCL14Q16627 93 aa11.47□□□□□ -0.57
CCDC142-208ENST00000486335 SH3D19Q5HYK7 790 aa11.47□□□□□ -0.57
CCDC142-208ENST00000486335 PROCA1Q8NCQ7 364 aaPredicted RBP11.47□□□□□ -0.57
CCDC142-208ENST00000486335 P2RX7Q99572 595 aaKnown RBP11.47□□□□□ -0.57
CCDC142-208ENST00000486335 CDX2Q99626 313 aaPredicted RBP11.47□□□□□ -0.57
CCDC142-208ENST00000486335 XRCC5P13010 732 aaKnown RBP11.46□□□□□ -0.57
CCDC142-208ENST00000486335 ADORA1P30542 326 aa11.46□□□□□ -0.57
CCDC142-208ENST00000486335 GCLCP48506 637 aaPredicted RBP11.46□□□□□ -0.57
CCDC142-208ENST00000486335 HMGCS2P54868 508 aa11.46□□□□□ -0.57
CCDC142-208ENST00000486335 SHROOM1Q2M3G4 852 aaPredicted RBP11.46□□□□□ -0.57
CCDC142-208ENST00000486335 TTYH1Q9H313 450 aaPredicted RBP11.46□□□□□ -0.57
CCDC142-208ENST00000486335 SEMA6BQ9H3T3 888 aa11.46□□□□□ -0.57
CCDC142-208ENST00000486335 RBPJLQ9UBG7 517 aa11.46□□□□□ -0.57
CCDC142-208ENST00000486335 LRRFIP2Q9Y608 721 aaKnown RBP11.46□□□□□ -0.57
CCDC142-208ENST00000486335 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.46□□□□□ -0.57
CCDC142-208ENST00000486335 IGHA2P01877 340 aa11.45□□□□□ -0.58
CCDC142-208ENST00000486335 SLC5A1P13866 664 aa11.45□□□□□ -0.58
CCDC142-208ENST00000486335 MRPL50Q8N5N7 158 aaKnown RBP11.45□□□□□ -0.58
CCDC142-208ENST00000486335 ZNF280CQ8ND82 737 aa11.45□□□□□ -0.58
CCDC142-208ENST00000486335 GPR75-ASB3A0A0A6YYF3 556 aa11.44□□□□□ -0.58
CCDC142-208ENST00000486335 NPM3O75607 178 aaKnown RBP11.44□□□□□ -0.58
CCDC142-208ENST00000486335 HOXA7P31268 230 aaPredicted RBP11.44□□□□□ -0.58
CCDC142-208ENST00000486335 CAP2P40123 477 aa11.44□□□□□ -0.58
CCDC142-208ENST00000486335 BTDP43251 543 aa11.44□□□□□ -0.58
CCDC142-208ENST00000486335 PICALMQ13492 652 aa11.44□□□□□ -0.58
CCDC142-208ENST00000486335 C9orf50Q5SZB4 431 aa11.44□□□□□ -0.58
CCDC142-208ENST00000486335 MORN1Q5T089 497 aa11.44□□□□□ -0.58
CCDC142-208ENST00000486335 ZSCAN29Q8IWY8 852 aaPredicted RBP11.44□□□□□ -0.58
CCDC142-208ENST00000486335 PORCNQ9H237 461 aa11.44□□□□□ -0.58
CCDC142-208ENST00000486335 FLRT1Q9NZU1 646 aa11.44□□□□□ -0.58
CCDC142-208ENST00000486335 RAPGEFL1Q9UHV5 662 aa11.44□□□□□ -0.58
CCDC142-208ENST00000486335 GTF3C3Q9Y5Q9 886 aa11.44□□□□□ -0.58
CCDC142-208ENST00000486335 RASGRF1Q13972 1273 aa11.43□□□□□ -0.58
CCDC142-208ENST00000486335 SHHQ15465 462 aa11.43□□□□□ -0.58
CCDC142-208ENST00000486335 ERICH6BQ5W0A0 696 aa11.43□□□□□ -0.58
CCDC142-208ENST00000486335 CCDC102BQ68D86 513 aa11.43□□□□□ -0.58
CCDC142-208ENST00000486335 OSBPL5Q9H0X9 879 aaPredicted RBP11.43□□□□□ -0.58
CCDC142-208ENST00000486335 PNMA3Q9UL41 463 aa11.43□□□□□ -0.58
CCDC142-208ENST00000486335 DOCK1Q14185 1865 aa11.42□□□□□ -0.58
CCDC142-208ENST00000486335 DOCK2Q92608 1830 aa11.42□□□□□ -0.58
CCDC142-208ENST00000486335 LOC285556D6RIA3 1793 aa11.42□□□□□ -0.58
CCDC142-208ENST00000486335 CNMDO75829 334 aa11.42□□□□□ -0.58
CCDC142-208ENST00000486335 ATP2B3Q16720 1220 aa11.42□□□□□ -0.58
CCDC142-208ENST00000486335 MAFAQ8NHW3 353 aaPredicted RBP11.42□□□□□ -0.58
CCDC142-208ENST00000486335 NUDT12Q9BQG2 462 aa11.42□□□□□ -0.58
CCDC142-208ENST00000486335 WDR18Q9BV38 432 aa11.42□□□□□ -0.58
CCDC142-208ENST00000486335 DNAJC18Q9H819 358 aa11.42□□□□□ -0.58
CCDC142-208ENST00000486335 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCDC142-208ENST00000486335 DENND2AQ9ULE3 1009 aa11.42□□□□□ -0.58
CCDC142-208ENST00000486335 MROH7-TTC4A0A0A0MT08 1334 aa11.41□□□□□ -0.58
CCDC142-208ENST00000486335 MYH2Q9UKX2 1941 aa11.41□□□□□ -0.58
CCDC142-208ENST00000486335 USP17L5A8MUK1 530 aa11.41□□□□□ -0.58
CCDC142-208ENST00000486335 SEMA3EO15041 775 aa11.41□□□□□ -0.58
CCDC142-208ENST00000486335 CIAO1O76071 339 aa11.41□□□□□ -0.58
CCDC142-208ENST00000486335 RARSP54136 660 aaKnown RBP11.41□□□□□ -0.58
CCDC142-208ENST00000486335 RRP1P56182 461 aaKnown RBP11.41□□□□□ -0.58
CCDC142-208ENST00000486335 BACE1P56817 501 aa11.41□□□□□ -0.58
CCDC142-208ENST00000486335 TIMM10P62072 90 aa11.41□□□□□ -0.58
CCDC142-208ENST00000486335 HERVK_113P62684 666 aa11.41□□□□□ -0.58
CCDC142-208ENST00000486335 MECOMQ03112 1051 aa11.41□□□□□ -0.58
CCDC142-208ENST00000486335 GPR142Q7Z601 462 aa11.41□□□□□ -0.58
CCDC142-208ENST00000486335 TRPV1Q8NER1 839 aa11.41□□□□□ -0.58
CCDC142-208ENST00000486335 GPRC5AQ8NFJ5 357 aa11.41□□□□□ -0.58
CCDC142-208ENST00000486335 MYLIPQ8WY64 445 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms