RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 ZSCAN29Q8IWY8 852 aaPredicted RBP23.97■■□□□ 1.43
CHRD-216ENST00000486066 PNMA3Q9UL41 463 aa23.97■■□□□ 1.43
CHRD-216ENST00000486066 PA2G4Q9UQ80 394 aaKnown RBP23.97■■□□□ 1.43
CHRD-216ENST00000486066 GCLCP48506 637 aaPredicted RBP23.96■■□□□ 1.43
CHRD-216ENST00000486066 TRIM32Q13049 653 aa23.96■■□□□ 1.43
CHRD-216ENST00000486066 ALDH1L2Q3SY69 923 aa23.96■■□□□ 1.43
CHRD-216ENST00000486066 DZIP1Q86YF9 867 aaKnown RBP23.96■■□□□ 1.43
CHRD-216ENST00000486066 OSBPL5Q9H0X9 879 aaPredicted RBP23.96■■□□□ 1.43
CHRD-216ENST00000486066 SPTBN5Q9NRC6 3674 aaKnown RBP23.96■■□□□ 1.43
CHRD-216ENST00000486066 RPTORQ8N122 1335 aa23.95■■□□□ 1.42
CHRD-216ENST00000486066 FAM196BA6NMK8 535 aa23.95■■□□□ 1.42
CHRD-216ENST00000486066 ANP32CO43423 234 aa23.95■■□□□ 1.42
CHRD-216ENST00000486066 PICALMQ13492 652 aa23.95■■□□□ 1.42
CHRD-216ENST00000486066 LRIT3Q3SXY7 679 aa23.95■■□□□ 1.42
CHRD-216ENST00000486066 SH3D19Q5HYK7 790 aa23.95■■□□□ 1.42
CHRD-216ENST00000486066 MAP3K21Q5TCX8 1036 aa23.95■■□□□ 1.42
CHRD-216ENST00000486066 SLF2Q8IX21 1173 aa23.95■■□□□ 1.42
CHRD-216ENST00000486066 OGDHLQ9ULD0 1010 aa23.95■■□□□ 1.42
CHRD-216ENST00000486066 UBTFL1P0CB47 393 aaPredicted RBP23.94■■□□□ 1.42
CHRD-216ENST00000486066 MECOMQ03112 1051 aa23.94■■□□□ 1.42
CHRD-216ENST00000486066 SPP2Q13103 211 aa23.94■■□□□ 1.42
CHRD-216ENST00000486066 FAM9BQ8IZU0 186 aa23.94■■□□□ 1.42
CHRD-216ENST00000486066 ZNF280CQ8ND82 737 aa23.94■■□□□ 1.42
CHRD-216ENST00000486066 TBC1D2Q9BYX2 928 aa23.94■■□□□ 1.42
CHRD-216ENST00000486066 MORF4L1Q9UBU8 362 aa23.94■■□□□ 1.42
CHRD-216ENST00000486066 ABCF2Q9UG63 623 aa23.94■■□□□ 1.42
CHRD-216ENST00000486066 CDK5RAP2Q96SN8 1893 aa23.94■■□□□ 1.42
CHRD-216ENST00000486066 E9PSI1 815 aa23.93■■□□□ 1.42
CHRD-216ENST00000486066 TIMM10P62072 90 aa23.93■■□□□ 1.42
CHRD-216ENST00000486066 C7orf61Q8IZ16 206 aa23.93■■□□□ 1.42
CHRD-216ENST00000486066 ASCC2Q9H1I8 757 aaPredicted RBP23.93■■□□□ 1.42
CHRD-216ENST00000486066 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.93■■□□□ 1.42
CHRD-216ENST00000486066 MAP4K4O95819 1239 aaPredicted RBP23.92■■□□□ 1.42
CHRD-216ENST00000486066 CAP2P40123 477 aa23.92■■□□□ 1.42
CHRD-216ENST00000486066 SLFN5Q08AF3 891 aa23.92■■□□□ 1.42
CHRD-216ENST00000486066 SPTY2D1Q68D10 685 aaPredicted RBP23.92■■□□□ 1.42
CHRD-216ENST00000486066 TRIB2Q92519 343 aa23.92■■□□□ 1.42
CHRD-216ENST00000486066 NBPF3Q9H094 633 aa23.92■■□□□ 1.42
CHRD-216ENST00000486066 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.92■■□□□ 1.42
CHRD-216ENST00000486066 TAOK2Q9UL54 1235 aa23.92■■□□□ 1.42
CHRD-216ENST00000486066 ZMYND8Q9ULU4 1186 aaPredicted RBP23.92■■□□□ 1.42
CHRD-216ENST00000486066 FOCADQ5VW36 1801 aa23.91■■□□□ 1.42
CHRD-216ENST00000486066 PFASO15067 1338 aa23.91■■□□□ 1.42
CHRD-216ENST00000486066 HMGCS2P54868 508 aa23.91■■□□□ 1.42
CHRD-216ENST00000486066 NSUN4Q96CB9 384 aaKnown RBP23.91■■□□□ 1.42
CHRD-216ENST00000486066 XAGE2Q96GT9 111 aa23.91■■□□□ 1.42
CHRD-216ENST00000486066 HMX1Q9NP08 348 aaPredicted RBP23.91■■□□□ 1.42
CHRD-216ENST00000486066 FRMPD3Q5JV73 1810 aa23.91■■□□□ 1.42
CHRD-216ENST00000486066 A0A1B0GUL7 405 aa23.9■■□□□ 1.42
CHRD-216ENST00000486066 MAGEA10P43363 369 aaPredicted RBP23.9■■□□□ 1.42
CHRD-216ENST00000486066 COL6A1P12109 1028 aa23.89■■□□□ 1.41
CHRD-216ENST00000486066 ERICH6Q7L0X2 663 aa23.89■■□□□ 1.41
CHRD-216ENST00000486066 TRMT2AQ8IZ69 625 aaKnown RBP23.89■■□□□ 1.41
CHRD-216ENST00000486066 C11orf49Q9H6J7 331 aa23.89■■□□□ 1.41
CHRD-216ENST00000486066 HMG20BQ9P0W2 317 aa23.89■■□□□ 1.41
CHRD-216ENST00000486066 STXBP5LQ9Y2K9 1186 aa23.89■■□□□ 1.41
CHRD-216ENST00000486066 PRUNE2Q8WUY3 3088 aa23.89■■□□□ 1.41
CHRD-216ENST00000486066 CDH23Q9H251 3354 aa23.88■■□□□ 1.41
CHRD-216ENST00000486066 HOXA7P31268 230 aaPredicted RBP23.88■■□□□ 1.41
CHRD-216ENST00000486066 PABPC4Q13310 644 aaKnown RBP eCLIP23.88■■□□□ 1.41
CHRD-216ENST00000486066 MTX1Q13505 466 aa23.88■■□□□ 1.41
CHRD-216ENST00000486066 Q7L0L9 218 aa23.88■■□□□ 1.41
CHRD-216ENST00000486066 TDHQ8IZJ6 230 aa23.88■■□□□ 1.41
CHRD-216ENST00000486066 DEFB123Q8N688 67 aa23.88■■□□□ 1.41
CHRD-216ENST00000486066 USP6NLQ92738 828 aa23.88■■□□□ 1.41
CHRD-216ENST00000486066 WDR18Q9BV38 432 aa23.88■■□□□ 1.41
CHRD-216ENST00000486066 MTMR10Q9NXD2 777 aa23.88■■□□□ 1.41
CHRD-216ENST00000486066 USP17L5A8MUK1 530 aa23.87■■□□□ 1.41
CHRD-216ENST00000486066 XRCC5P13010 732 aaKnown RBP23.87■■□□□ 1.41
CHRD-216ENST00000486066 PI16Q6UXB8 463 aa23.87■■□□□ 1.41
CHRD-216ENST00000486066 METTL16Q86W50 562 aaKnown RBP23.87■■□□□ 1.41
CHRD-216ENST00000486066 MEIS3Q99687 375 aa23.87■■□□□ 1.41
CHRD-216ENST00000486066 MAST2Q6P0Q8 1798 aa23.87■■□□□ 1.41
CHRD-216ENST00000486066 SYN1P17600 705 aa23.86■■□□□ 1.41
CHRD-216ENST00000486066 JAG1P78504 1218 aa23.86■■□□□ 1.41
CHRD-216ENST00000486066 TFCP2Q12800 502 aa23.86■■□□□ 1.41
CHRD-216ENST00000486066 MVPQ14764 893 aaKnown RBP23.86■■□□□ 1.41
CHRD-216ENST00000486066 POTEEQ6S8J3 1075 aa23.86■■□□□ 1.41
CHRD-216ENST00000486066 TXNRD2Q9NNW7 524 aa23.86■■□□□ 1.41
CHRD-216ENST00000486066 SMC4Q9NTJ3 1288 aa23.86■■□□□ 1.41
CHRD-216ENST00000486066 HERC5Q9UII4 1024 aaKnown RBP23.86■■□□□ 1.41
CHRD-216ENST00000486066 ARID4AP29374 1257 aaPredicted RBP23.85■■□□□ 1.41
CHRD-216ENST00000486066 DNAJC18Q9H819 358 aa23.85■■□□□ 1.41
CHRD-216ENST00000486066 PEX10O60683 326 aa23.84■■□□□ 1.41
CHRD-216ENST00000486066 PRKAR2AP13861 404 aaKnown RBP23.84■■□□□ 1.41
CHRD-216ENST00000486066 BACE1P56817 501 aa23.84■■□□□ 1.41
CHRD-216ENST00000486066 LHX8Q68G74 356 aa23.84■■□□□ 1.41
CHRD-216ENST00000486066 P2RX7Q99572 595 aaKnown RBP23.84■■□□□ 1.41
CHRD-216ENST00000486066 AKAP2Q9Y2D5 859 aa23.84■■□□□ 1.41
CHRD-216ENST00000486066 MTMR2Q13614 643 aa23.83■■□□□ 1.41
CHRD-216ENST00000486066 TBC1D9Q6ZT07 1266 aa23.83■■□□□ 1.41
CHRD-216ENST00000486066 SPATA5Q8NB90 893 aa23.83■■□□□ 1.41
CHRD-216ENST00000486066 NOB1Q9ULX3 412 aaKnown RBP23.83■■□□□ 1.41
CHRD-216ENST00000486066 HDAC5Q9UQL6 1122 aa23.83■■□□□ 1.41
CHRD-216ENST00000486066 MYO5AQ9Y4I1 1855 aaKnown RBP23.83■■□□□ 1.4
CHRD-216ENST00000486066 LDHCP07864 332 aa23.82■■□□□ 1.4
CHRD-216ENST00000486066 CYP2B6P20813 491 aa23.82■■□□□ 1.4
CHRD-216ENST00000486066 HERVK_113P62684 666 aa23.82■■□□□ 1.4
CHRD-216ENST00000486066 GSTO1P78417 241 aa23.82■■□□□ 1.4
CHRD-216ENST00000486066 SOCS4Q8WXH5 440 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms