RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 INPP5BP32019 993 aa21.74■■□□□ 1.07
CNKSR1-208ENST00000484874 KIF23Q02241 960 aaPredicted RBP21.74■■□□□ 1.07
CNKSR1-208ENST00000484874 GRM1Q13255 1194 aa21.74■■□□□ 1.07
CNKSR1-208ENST00000484874 TTC22Q5TAA0 569 aa21.74■■□□□ 1.07
CNKSR1-208ENST00000484874 WNK4Q96J92 1243 aa21.74■■□□□ 1.07
CNKSR1-208ENST00000484874 PPP4R2Q9NY27 417 aa21.74■■□□□ 1.07
CNKSR1-208ENST00000484874 SAP30BPQ9UHR5 308 aaKnown RBP21.74■■□□□ 1.07
CNKSR1-208ENST00000484874 SLC4A4Q9Y6R1 1079 aa21.74■■□□□ 1.07
CNKSR1-208ENST00000484874 PATL2C9JE40 543 aaKnown RBP21.73■■□□□ 1.07
CNKSR1-208ENST00000484874 INHBEP58166 350 aa21.73■■□□□ 1.07
CNKSR1-208ENST00000484874 ERO1BQ86YB8 467 aa21.73■■□□□ 1.07
CNKSR1-208ENST00000484874 DDRGK1Q96HY6 314 aa21.73■■□□□ 1.07
CNKSR1-208ENST00000484874 ELP3Q9H9T3 547 aa21.73■■□□□ 1.07
CNKSR1-208ENST00000484874 MCM9Q9NXL9 1143 aa21.73■■□□□ 1.07
CNKSR1-208ENST00000484874 SNCAIPQ9Y6H5 919 aa21.73■■□□□ 1.07
CNKSR1-208ENST00000484874 SPDYE5A6NIY4 337 aa21.72■■□□□ 1.07
CNKSR1-208ENST00000484874 GSG1L2A8MUP6 293 aa21.72■■□□□ 1.07
CNKSR1-208ENST00000484874 M0R2C6 588 aa21.72■■□□□ 1.07
CNKSR1-208ENST00000484874 POLR3DP05423 398 aaPredicted RBP21.72■■□□□ 1.07
CNKSR1-208ENST00000484874 SDSP20132 328 aa21.72■■□□□ 1.07
CNKSR1-208ENST00000484874 TM4SF4P48230 202 aa21.72■■□□□ 1.07
CNKSR1-208ENST00000484874 PLCD1P51178 756 aa21.72■■□□□ 1.07
CNKSR1-208ENST00000484874 ZIC5Q96T25 663 aa21.72■■□□□ 1.07
CNKSR1-208ENST00000484874 SEC62Q99442 399 aaKnown RBP21.72■■□□□ 1.07
CNKSR1-208ENST00000484874 WBP1LQ9NX94 342 aa21.72■■□□□ 1.07
CNKSR1-208ENST00000484874 SERPINB13Q9UIV8 391 aa21.72■■□□□ 1.07
CNKSR1-208ENST00000484874 MYH1P12882 1939 aa21.71■■□□□ 1.07
CNKSR1-208ENST00000484874 HIP1O00291 1037 aa21.71■■□□□ 1.07
CNKSR1-208ENST00000484874 SLURP2P0DP57 97 aa21.71■■□□□ 1.07
CNKSR1-208ENST00000484874 PPATQ06203 517 aa21.71■■□□□ 1.07
CNKSR1-208ENST00000484874 MCMDC2Q4G0Z9 681 aa21.71■■□□□ 1.07
CNKSR1-208ENST00000484874 SCYL3Q8IZE3 742 aa21.71■■□□□ 1.07
CNKSR1-208ENST00000484874 CRACR2BQ8N4Y2 399 aaPredicted RBP21.71■■□□□ 1.07
CNKSR1-208ENST00000484874 OPTNQ96CV9 577 aa21.71■■□□□ 1.07
CNKSR1-208ENST00000484874 GINM1Q9NU53 330 aa21.71■■□□□ 1.07
CNKSR1-208ENST00000484874 PCNTO95613 3336 aa21.7■■□□□ 1.06
CNKSR1-208ENST00000484874 MANSC4A6NHS7 340 aaPredicted RBP21.7■■□□□ 1.06
CNKSR1-208ENST00000484874 GJA5P36382 358 aa21.7■■□□□ 1.06
CNKSR1-208ENST00000484874 CAP2P40123 477 aa21.7■■□□□ 1.06
CNKSR1-208ENST00000484874 GABPAQ06546 454 aa21.7■■□□□ 1.06
CNKSR1-208ENST00000484874 SBK1Q52WX2 424 aa21.7■■□□□ 1.06
CNKSR1-208ENST00000484874 C12orf60Q5U649 245 aa21.7■■□□□ 1.06
CNKSR1-208ENST00000484874 TATDN1Q6P1N9 297 aa21.7■■□□□ 1.06
CNKSR1-208ENST00000484874 THSD7BQ9C0I4 1608 aa21.69■■□□□ 1.06
CNKSR1-208ENST00000484874 USP17L12C9JPN9 530 aa21.69■■□□□ 1.06
CNKSR1-208ENST00000484874 USP17L21D6R901 530 aa21.69■■□□□ 1.06
CNKSR1-208ENST00000484874 GSPT1P15170 499 aaKnown RBP21.69■■□□□ 1.06
CNKSR1-208ENST00000484874 AMOTL1Q8IY63 956 aa21.69■■□□□ 1.06
CNKSR1-208ENST00000484874 TRIM34Q9BYJ4 488 aa21.69■■□□□ 1.06
CNKSR1-208ENST00000484874 DNAJC18Q9H819 358 aa21.69■■□□□ 1.06
CNKSR1-208ENST00000484874 TESPA1A2RU30 521 aaPredicted RBP21.68■■□□□ 1.06
CNKSR1-208ENST00000484874 FAM196BA6NMK8 535 aa21.68■■□□□ 1.06
CNKSR1-208ENST00000484874 SREBF2Q12772 1141 aa21.68■■□□□ 1.06
CNKSR1-208ENST00000484874 PPIL2Q13356 520 aa21.68■■□□□ 1.06
CNKSR1-208ENST00000484874 CTR9Q6PD62 1173 aa21.68■■□□□ 1.06
CNKSR1-208ENST00000484874 FAM227BQ96M60 508 aa21.68■■□□□ 1.06
CNKSR1-208ENST00000484874 PICK1Q9NRD5 415 aa21.68■■□□□ 1.06
CNKSR1-208ENST00000484874 OTOFQ9HC10 1997 aa21.68■■□□□ 1.06
CNKSR1-208ENST00000484874 PTPRAP18433 802 aa21.67■■□□□ 1.06
CNKSR1-208ENST00000484874 RRP1BQ14684 758 aaKnown RBP21.67■■□□□ 1.06
CNKSR1-208ENST00000484874 IFNL3Q8IZI9 196 aa21.67■■□□□ 1.06
CNKSR1-208ENST00000484874 CNKSR2Q8WXI2 1034 aa21.67■■□□□ 1.06
CNKSR1-208ENST00000484874 MS4A4AQ96JQ5 239 aa21.67■■□□□ 1.06
CNKSR1-208ENST00000484874 TBC1D2Q9BYX2 928 aa21.67■■□□□ 1.06
CNKSR1-208ENST00000484874 NACAP1Q9BZK3 213 aa21.67■■□□□ 1.06
CNKSR1-208ENST00000484874 ARPP21Q9UBL0 812 aaPredicted RBP21.67■■□□□ 1.06
CNKSR1-208ENST00000484874 SIPA1L1O43166 1804 aa21.66■■□□□ 1.06
CNKSR1-208ENST00000484874 CA12O43570 354 aa21.66■■□□□ 1.06
CNKSR1-208ENST00000484874 GTF2A2P52657 109 aa21.66■■□□□ 1.06
CNKSR1-208ENST00000484874 MFAP1P55081 439 aaKnown RBP21.66■■□□□ 1.06
CNKSR1-208ENST00000484874 NMIQ13287 307 aaPredicted RBP21.66■■□□□ 1.06
CNKSR1-208ENST00000484874 OTUD5Q96G74 571 aa21.66■■□□□ 1.06
CNKSR1-208ENST00000484874 BEGAINQ9BUH8 593 aa21.66■■□□□ 1.06
CNKSR1-208ENST00000484874 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.66■■□□□ 1.06
CNKSR1-208ENST00000484874 SWAP70Q9UH65 585 aa21.66■■□□□ 1.06
CNKSR1-208ENST00000484874 A0A0D9SFI3 127 aa21.65■■□□□ 1.06
CNKSR1-208ENST00000484874 CXCL11O14625 94 aa21.65■■□□□ 1.06
CNKSR1-208ENST00000484874 IRF6O14896 467 aa21.65■■□□□ 1.06
CNKSR1-208ENST00000484874 APPP05067 770 aa21.65■■□□□ 1.06
CNKSR1-208ENST00000484874 ASNSP08243 561 aa21.65■■□□□ 1.06
CNKSR1-208ENST00000484874 MKRN3Q13064 507 aaKnown RBP21.65■■□□□ 1.06
CNKSR1-208ENST00000484874 ALX1Q15699 326 aa21.65■■□□□ 1.06
CNKSR1-208ENST00000484874 SLC4A8Q2Y0W8 1093 aa21.65■■□□□ 1.06
CNKSR1-208ENST00000484874 DIAPH3Q9NSV4 1193 aa21.65■■□□□ 1.06
CNKSR1-208ENST00000484874 KCNH4Q9UQ05 1017 aa21.65■■□□□ 1.06
CNKSR1-208ENST00000484874 DDX60LQ5H9U9 1706 aaKnown RBP21.64■■□□□ 1.06
CNKSR1-208ENST00000484874 CYP2D6P10635 497 aa21.64■■□□□ 1.05
CNKSR1-208ENST00000484874 SHMT1P34896 483 aa21.64■■□□□ 1.05
CNKSR1-208ENST00000484874 CERKLQ49MI3 558 aaPredicted RBP21.64■■□□□ 1.05
CNKSR1-208ENST00000484874 CCDC129Q6ZRS4 1044 aa21.64■■□□□ 1.05
CNKSR1-208ENST00000484874 EPB41L4AQ9HCS5 686 aaPredicted RBP21.64■■□□□ 1.05
CNKSR1-208ENST00000484874 AFG3L2Q9Y4W6 797 aa21.64■■□□□ 1.05
CNKSR1-208ENST00000484874 ZHX2Q9Y6X8 837 aa21.64■■□□□ 1.05
CNKSR1-208ENST00000484874 NAV1Q8NEY1 1877 aa21.63■■□□□ 1.05
CNKSR1-208ENST00000484874 USP17L5A8MUK1 530 aa21.63■■□□□ 1.05
CNKSR1-208ENST00000484874 HSPA1AP0DMV8 641 aaKnown RBP21.63■■□□□ 1.05
CNKSR1-208ENST00000484874 HSPA1BP0DMV9 641 aaKnown RBP21.63■■□□□ 1.05
CNKSR1-208ENST00000484874 CETPP11597 493 aa21.63■■□□□ 1.05
CNKSR1-208ENST00000484874 SNAPC2Q13487 334 aa21.63■■□□□ 1.05
CNKSR1-208ENST00000484874 SAGE1Q9NXZ1 904 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms