RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 TBC1D12O60347 775 aa31.95■■■□□ 2.71
GTF3C4-202ENST00000483873 PDE4AP27815 886 aa31.95■■■□□ 2.71
GTF3C4-202ENST00000483873 OTUD5Q96G74 571 aa31.95■■■□□ 2.71
GTF3C4-202ENST00000483873 PI4KBQ9UBF8 816 aa31.95■■■□□ 2.71
GTF3C4-202ENST00000483873 SPDYE5A6NIY4 337 aa31.94■■■□□ 2.7
GTF3C4-202ENST00000483873 APPBP2Q92624 585 aa31.94■■■□□ 2.7
GTF3C4-202ENST00000483873 OSBP2Q969R2 916 aa31.94■■■□□ 2.7
GTF3C4-202ENST00000483873 BEGAINQ9BUH8 593 aa31.94■■■□□ 2.7
GTF3C4-202ENST00000483873 NOL9Q5SY16 702 aaKnown RBP31.93■■■□□ 2.7
GTF3C4-202ENST00000483873 TSKSQ9UJT2 592 aa31.93■■■□□ 2.7
GTF3C4-202ENST00000483873 PHIPQ8WWQ0 1821 aa31.93■■■□□ 2.7
GTF3C4-202ENST00000483873 ZFYP08048 801 aaPredicted RBP31.92■■■□□ 2.7
GTF3C4-202ENST00000483873 ERO1BQ86YB8 467 aa31.92■■■□□ 2.7
GTF3C4-202ENST00000483873 OSBPL3Q9H4L5 887 aa31.92■■■□□ 2.7
GTF3C4-202ENST00000483873 DNAJC18Q9H819 358 aa31.92■■■□□ 2.7
GTF3C4-202ENST00000483873 EVI5LQ96CN4 794 aa31.92■■■□□ 2.7
GTF3C4-202ENST00000483873 DCP1AQ9NPI6 582 aaPredicted RBP31.92■■■□□ 2.7
GTF3C4-202ENST00000483873 HERC5Q9UII4 1024 aaKnown RBP31.92■■■□□ 2.7
GTF3C4-202ENST00000483873 HLA-DOAP06340 250 aa31.91■■■□□ 2.7
GTF3C4-202ENST00000483873 RRP1BQ14684 758 aaKnown RBP31.91■■■□□ 2.7
GTF3C4-202ENST00000483873 MANSC4A6NHS7 340 aaPredicted RBP31.9■■■□□ 2.7
GTF3C4-202ENST00000483873 M0R2C6 588 aa31.9■■■□□ 2.7
GTF3C4-202ENST00000483873 TM4SF4P48230 202 aa31.9■■■□□ 2.7
GTF3C4-202ENST00000483873 EVX2Q03828 476 aa31.9■■■□□ 2.7
GTF3C4-202ENST00000483873 METTL16Q86W50 562 aaKnown RBP31.9■■■□□ 2.7
GTF3C4-202ENST00000483873 REM2Q8IYK8 340 aaPredicted RBP31.9■■■□□ 2.7
GTF3C4-202ENST00000483873 SCYL3Q8IZE3 742 aa31.9■■■□□ 2.7
GTF3C4-202ENST00000483873 CRACR2BQ8N4Y2 399 aaPredicted RBP31.9■■■□□ 2.7
GTF3C4-202ENST00000483873 SEC62Q99442 399 aaKnown RBP31.9■■■□□ 2.7
GTF3C4-202ENST00000483873 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.9■■■□□ 2.7
GTF3C4-202ENST00000483873 SREBF2Q12772 1141 aa31.89■■■□□ 2.7
GTF3C4-202ENST00000483873 LRRFIP1Q32MZ4 808 aaKnown RBP31.89■■■□□ 2.7
GTF3C4-202ENST00000483873 RNF186Q9NXI6 227 aa31.89■■■□□ 2.7
GTF3C4-202ENST00000483873 MCM9Q9NXL9 1143 aa31.89■■■□□ 2.7
GTF3C4-202ENST00000483873 SLC4A4Q9Y6R1 1079 aa31.89■■■□□ 2.7
GTF3C4-202ENST00000483873 CTNND1O60716 968 aaKnown RBP31.88■■■□□ 2.69
GTF3C4-202ENST00000483873 HSPA8P11142 646 aaKnown RBP31.88■■■□□ 2.69
GTF3C4-202ENST00000483873 PLCD1P51178 756 aa31.88■■■□□ 2.69
GTF3C4-202ENST00000483873 FOXP4Q8IVH2 680 aaPredicted RBP31.88■■■□□ 2.69
GTF3C4-202ENST00000483873 MS4A4AQ96JQ5 239 aa31.88■■■□□ 2.69
GTF3C4-202ENST00000483873 STRBPQ96SI9 672 aaKnown RBP31.88■■■□□ 2.69
GTF3C4-202ENST00000483873 TRIM6-TRIM34B2RNG4 842 aa31.87■■■□□ 2.69
GTF3C4-202ENST00000483873 IRF6O14896 467 aa31.87■■■□□ 2.69
GTF3C4-202ENST00000483873 PPIL2Q13356 520 aa31.87■■■□□ 2.69
GTF3C4-202ENST00000483873 ZMYM1Q5SVZ6 1142 aa31.87■■■□□ 2.69
GTF3C4-202ENST00000483873 PTPRFP10586 1907 aa31.87■■■□□ 2.69
GTF3C4-202ENST00000483873 GPAA1O43292 621 aa31.86■■■□□ 2.69
GTF3C4-202ENST00000483873 TRPA1O75762 1119 aa31.86■■■□□ 2.69
GTF3C4-202ENST00000483873 POLR3DP05423 398 aaPredicted RBP31.86■■■□□ 2.69
GTF3C4-202ENST00000483873 CYP2D6P10635 497 aa31.86■■■□□ 2.69
GTF3C4-202ENST00000483873 CTCFP49711 727 aaPredicted RBP31.86■■■□□ 2.69
GTF3C4-202ENST00000483873 PPATQ06203 517 aa31.86■■■□□ 2.69
GTF3C4-202ENST00000483873 CCDC84Q86UT8 332 aaPredicted RBP31.86■■■□□ 2.69
GTF3C4-202ENST00000483873 TRIM34Q9BYJ4 488 aa31.86■■■□□ 2.69
GTF3C4-202ENST00000483873 ATP8A2Q9NTI2 1148 aa31.86■■■□□ 2.69
GTF3C4-202ENST00000483873 MYH8P13535 1937 aa31.85■■■□□ 2.69
GTF3C4-202ENST00000483873 TTC6Q86TZ1 520 aa31.85■■■□□ 2.69
GTF3C4-202ENST00000483873 TNS4Q8IZW8 715 aa31.85■■■□□ 2.69
GTF3C4-202ENST00000483873 RILPL2Q969X0 211 aa31.85■■■□□ 2.69
GTF3C4-202ENST00000483873 PICK1Q9NRD5 415 aa31.85■■■□□ 2.69
GTF3C4-202ENST00000483873 IGF2BP3O00425 579 aaKnown RBP eCLIP31.84■■■□□ 2.69
GTF3C4-202ENST00000483873 CA12O43570 354 aa31.84■■■□□ 2.69
GTF3C4-202ENST00000483873 PTPRAP18433 802 aa31.84■■■□□ 2.69
GTF3C4-202ENST00000483873 LBX1P52954 281 aa31.84■■■□□ 2.69
GTF3C4-202ENST00000483873 SHROOM1Q2M3G4 852 aaPredicted RBP31.84■■■□□ 2.69
GTF3C4-202ENST00000483873 EHD4Q9H223 541 aa31.84■■■□□ 2.69
GTF3C4-202ENST00000483873 SERPINB13Q9UIV8 391 aa31.84■■■□□ 2.69
GTF3C4-202ENST00000483873 CAP2P40123 477 aa31.83■■■□□ 2.69
GTF3C4-202ENST00000483873 BRI3BPQ8WY22 251 aa31.83■■■□□ 2.69
GTF3C4-202ENST00000483873 PTPN18Q99952 460 aa31.83■■■□□ 2.69
GTF3C4-202ENST00000483873 TESPA1A2RU30 521 aaPredicted RBP31.83■■■□□ 2.69
GTF3C4-202ENST00000483873 GTF2A2P52657 109 aa31.83■■■□□ 2.69
GTF3C4-202ENST00000483873 INHBEP58166 350 aa31.83■■■□□ 2.69
GTF3C4-202ENST00000483873 JAG1P78504 1218 aa31.83■■■□□ 2.69
GTF3C4-202ENST00000483873 IFNL1Q8IU54 200 aa31.83■■■□□ 2.69
GTF3C4-202ENST00000483873 SAGE1Q9NXZ1 904 aa31.83■■■□□ 2.69
GTF3C4-202ENST00000483873 CYP2D7A0A087X1C5 515 aa31.82■■■□□ 2.68
GTF3C4-202ENST00000483873 CCL15-CCL14A0A0B4J2E2 113 aa31.82■■■□□ 2.68
GTF3C4-202ENST00000483873 SMIM22K7EJ46 135 aa31.82■■■□□ 2.68
GTF3C4-202ENST00000483873 CCL15Q16663 113 aa31.82■■■□□ 2.68
GTF3C4-202ENST00000483873 ERICH6BQ5W0A0 696 aa31.82■■■□□ 2.68
GTF3C4-202ENST00000483873 ZHX2Q9Y6X8 837 aa31.82■■■□□ 2.68
GTF3C4-202ENST00000483873 GSG1L2A8MUP6 293 aa31.81■■■□□ 2.68
GTF3C4-202ENST00000483873 GDF11O95390 407 aa31.81■■■□□ 2.68
GTF3C4-202ENST00000483873 CCDC129Q6ZRS4 1044 aa31.81■■■□□ 2.68
GTF3C4-202ENST00000483873 USP17L12C9JPN9 530 aa31.8■■■□□ 2.68
GTF3C4-202ENST00000483873 USP17L21D6R901 530 aa31.8■■■□□ 2.68
GTF3C4-202ENST00000483873 GABPAQ06546 454 aa31.8■■■□□ 2.68
GTF3C4-202ENST00000483873 SNAPC2Q13487 334 aa31.8■■■□□ 2.68
GTF3C4-202ENST00000483873 EPB41L4AQ9HCS5 686 aaPredicted RBP31.8■■■□□ 2.68
GTF3C4-202ENST00000483873 KCNH4Q9UQ05 1017 aa31.8■■■□□ 2.68
GTF3C4-202ENST00000483873 CASP8AP2Q9UKL3 1982 aa31.8■■■□□ 2.68
GTF3C4-202ENST00000483873 FAM227BQ96M60 508 aa31.79■■■□□ 2.68
GTF3C4-202ENST00000483873 A0A0D9SFI3 127 aa31.78■■■□□ 2.68
GTF3C4-202ENST00000483873 GSPT1P15170 499 aaKnown RBP31.78■■■□□ 2.68
GTF3C4-202ENST00000483873 SHMT1P34896 483 aa31.78■■■□□ 2.68
GTF3C4-202ENST00000483873 TATDN1Q6P1N9 297 aa31.78■■■□□ 2.68
GTF3C4-202ENST00000483873 CTR9Q6PD62 1173 aa31.78■■■□□ 2.68
GTF3C4-202ENST00000483873 CENPQQ7L2Z9 268 aaPredicted RBP31.78■■■□□ 2.68
GTF3C4-202ENST00000483873 DYNLL2Q96FJ2 89 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms