RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 SMG8Q8ND04 991 aaKnown RBP11.38□□□□□ -0.59
MCF2-207ENST00000483690 WNT10AQ9GZT5 417 aa11.38□□□□□ -0.59
MCF2-207ENST00000483690 SUGCTQ9HAC7 445 aa11.38□□□□□ -0.59
MCF2-207ENST00000483690 CRIM1Q9NZV1 1036 aa11.38□□□□□ -0.59
MCF2-207ENST00000483690 FANCGO15287 622 aa11.37□□□□□ -0.59
MCF2-207ENST00000483690 ADH5P11766 374 aa11.37□□□□□ -0.59
MCF2-207ENST00000483690 RING1Q06587 406 aa11.37□□□□□ -0.59
MCF2-207ENST00000483690 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.37□□□□□ -0.59
MCF2-207ENST00000483690 TMEM40Q8WWA1 233 aa11.37□□□□□ -0.59
MCF2-207ENST00000483690 ATXN3LQ9H3M9 355 aa11.37□□□□□ -0.59
MCF2-207ENST00000483690 ACTR10Q9NZ32 417 aa11.37□□□□□ -0.59
MCF2-207ENST00000483690 GMIPQ9P107 970 aa11.37□□□□□ -0.59
MCF2-207ENST00000483690 SIRPGQ9P1W8 387 aa11.37□□□□□ -0.59
MCF2-207ENST00000483690 ADAM30Q9UKF2 790 aa11.37□□□□□ -0.59
MCF2-207ENST00000483690 MEIS3P2A8K0S8 358 aa11.36□□□□□ -0.59
MCF2-207ENST00000483690 SERINC3Q13530 473 aa11.36□□□□□ -0.59
MCF2-207ENST00000483690 BMS1Q14692 1282 aaKnown RBP11.36□□□□□ -0.59
MCF2-207ENST00000483690 NFE2L2Q16236 605 aa11.36□□□□□ -0.59
MCF2-207ENST00000483690 TMEM201Q5SNT2 666 aa11.36□□□□□ -0.59
MCF2-207ENST00000483690 ZBTB37Q5TC79 503 aa11.36□□□□□ -0.59
MCF2-207ENST00000483690 FDX2Q6P4F2 183 aa11.36□□□□□ -0.59
MCF2-207ENST00000483690 C12orf50Q8NA57 414 aaPredicted RBP11.36□□□□□ -0.59
MCF2-207ENST00000483690 TM9SF2Q99805 663 aa11.36□□□□□ -0.59
MCF2-207ENST00000483690 ANTXR1Q9H6X2 564 aa11.36□□□□□ -0.59
MCF2-207ENST00000483690 SOX4Q06945 474 aaPredicted RBP11.35□□□□□ -0.59
MCF2-207ENST00000483690 ZSCAN1Q8NBB4 408 aa11.35□□□□□ -0.59
MCF2-207ENST00000483690 FANCD2OSQ96PS1 177 aa11.35□□□□□ -0.59
MCF2-207ENST00000483690 CNTNAP5Q8WYK1 1306 aa11.35□□□□□ -0.59
MCF2-207ENST00000483690 K7ELQ4 463 aaPredicted RBP11.34□□□□□ -0.59
MCF2-207ENST00000483690 GRIK4Q16099 956 aa11.34□□□□□ -0.59
MCF2-207ENST00000483690 PPP2R5EQ16537 467 aa11.34□□□□□ -0.59
MCF2-207ENST00000483690 ANKRD34AQ69YU3 496 aa11.34□□□□□ -0.59
MCF2-207ENST00000483690 RUFY4Q6ZNE9 571 aa11.34□□□□□ -0.59
MCF2-207ENST00000483690 C19orf47Q8N9M1 422 aaKnown RBP11.34□□□□□ -0.59
MCF2-207ENST00000483690 RNF214Q8ND24 703 aa11.34□□□□□ -0.59
MCF2-207ENST00000483690 PIF1Q9H611 641 aa11.34□□□□□ -0.59
MCF2-207ENST00000483690 DISC1Q9NRI5 854 aa11.34□□□□□ -0.59
MCF2-207ENST00000483690 KLHL3Q9UH77 587 aa11.34□□□□□ -0.59
MCF2-207ENST00000483690 SLC22A31A6NKX4 558 aa11.33□□□□□ -0.6
MCF2-207ENST00000483690 F8W735 103 aaPredicted RBP11.33□□□□□ -0.6
MCF2-207ENST00000483690 SMARCA5O60264 1052 aaPredicted RBP11.33□□□□□ -0.6
MCF2-207ENST00000483690 SPATA31C1P0DKV0 1188 aa11.33□□□□□ -0.6
MCF2-207ENST00000483690 OVOS1Q6IE37 1185 aa11.33□□□□□ -0.6
MCF2-207ENST00000483690 SHISA2Q6UWI4 295 aa11.33□□□□□ -0.6
MCF2-207ENST00000483690 DYMQ7RTS9 669 aa11.33□□□□□ -0.6
MCF2-207ENST00000483690 AGGF1Q8N302 714 aaeCLIP11.33□□□□□ -0.6
MCF2-207ENST00000483690 TMEM130Q8N3G9 435 aa11.33□□□□□ -0.6
MCF2-207ENST00000483690 ZNF507Q8TCN5 953 aa11.33□□□□□ -0.6
MCF2-207ENST00000483690 MKL1Q969V6 931 aa11.33□□□□□ -0.6
MCF2-207ENST00000483690 PIDD1Q9HB75 910 aa11.33□□□□□ -0.6
MCF2-207ENST00000483690 TIAF1O95411 115 aa11.32□□□□□ -0.6
MCF2-207ENST00000483690 DRD2P14416 443 aa11.32□□□□□ -0.6
MCF2-207ENST00000483690 GUCY2CP25092 1073 aa11.32□□□□□ -0.6
MCF2-207ENST00000483690 CASP7P55210 303 aa11.32□□□□□ -0.6
MCF2-207ENST00000483690 GIMAP6Q6P9H5 292 aa11.32□□□□□ -0.6
MCF2-207ENST00000483690 NLRC3Q7RTR2 1065 aa11.32□□□□□ -0.6
MCF2-207ENST00000483690 ACSF2Q96CM8 615 aaPredicted RBP11.32□□□□□ -0.6
MCF2-207ENST00000483690 MRFAP1L1Q96HT8 127 aa11.32□□□□□ -0.6
MCF2-207ENST00000483690 USP21Q9UK80 565 aa11.32□□□□□ -0.6
MCF2-207ENST00000483690 CDK11AQ9UQ88 783 aaPredicted RBP11.32□□□□□ -0.6
MCF2-207ENST00000483690 TTLL4Q14679 1199 aa11.31□□□□□ -0.6
MCF2-207ENST00000483690 CDC37L1Q7L3B6 337 aa11.31□□□□□ -0.6
MCF2-207ENST00000483690 HID1Q8IV36 788 aa11.31□□□□□ -0.6
MCF2-207ENST00000483690 TAB3Q8N5C8 712 aaPredicted RBP11.31□□□□□ -0.6
MCF2-207ENST00000483690 KCT2Q8NC54 265 aa11.31□□□□□ -0.6
MCF2-207ENST00000483690 ATG4CQ96DT6 458 aa11.31□□□□□ -0.6
MCF2-207ENST00000483690 TNKS2Q9H2K2 1166 aa11.31□□□□□ -0.6
MCF2-207ENST00000483690 AKTIPQ9H8T0 292 aa11.31□□□□□ -0.6
MCF2-207ENST00000483690 ADAMTS8Q9UP79 889 aa11.31□□□□□ -0.6
MCF2-207ENST00000483690 DNAJA2O60884 412 aa11.3□□□□□ -0.6
MCF2-207ENST00000483690 HCLS1P14317 486 aaPredicted RBP11.3□□□□□ -0.6
MCF2-207ENST00000483690 NME1P15531 152 aaKnown RBP11.3□□□□□ -0.6
MCF2-207ENST00000483690 LORP23490 312 aaPredicted RBP11.3□□□□□ -0.6
MCF2-207ENST00000483690 NTF4P34130 210 aa11.3□□□□□ -0.6
MCF2-207ENST00000483690 ASPAP45381 313 aa11.3□□□□□ -0.6
MCF2-207ENST00000483690 YARSP54577 528 aaKnown RBP11.3□□□□□ -0.6
MCF2-207ENST00000483690 FXNQ16595 210 aa11.3□□□□□ -0.6
MCF2-207ENST00000483690 LARP1BQ659C4 914 aaKnown RBP11.3□□□□□ -0.6
MCF2-207ENST00000483690 TTC6Q86TZ1 520 aa11.3□□□□□ -0.6
MCF2-207ENST00000483690 MCATQ8IVS2 390 aaKnown RBP11.3□□□□□ -0.6
MCF2-207ENST00000483690 LENG1Q96BZ8 264 aaPredicted RBP11.3□□□□□ -0.6
MCF2-207ENST00000483690 NACC1Q96RE7 527 aa11.3□□□□□ -0.6
MCF2-207ENST00000483690 SRPK1Q96SB4 655 aaKnown RBP11.3□□□□□ -0.6
MCF2-207ENST00000483690 TJP2Q9UDY2 1190 aa11.3□□□□□ -0.6
MCF2-207ENST00000483690 RNGTTO60942 597 aaKnown RBP11.29□□□□□ -0.6
MCF2-207ENST00000483690 DDR2Q16832 855 aa11.29□□□□□ -0.6
MCF2-207ENST00000483690 ARSHQ5FYA8 562 aa11.29□□□□□ -0.6
MCF2-207ENST00000483690 CDCP2Q5VXM1 449 aa11.29□□□□□ -0.6
MCF2-207ENST00000483690 CELF2-AS1Q8N7Q2 184 aa11.29□□□□□ -0.6
MCF2-207ENST00000483690 FAM13CQ8NE31 585 aa11.29□□□□□ -0.6
MCF2-207ENST00000483690 SCARF2Q96GP6 870 aaPredicted RBP11.29□□□□□ -0.6
MCF2-207ENST00000483690 TMEM87BQ96K49 555 aa11.29□□□□□ -0.6
MCF2-207ENST00000483690 CEP41Q9BYV8 373 aa11.29□□□□□ -0.6
MCF2-207ENST00000483690 CNNM2Q9H8M5 875 aa11.29□□□□□ -0.6
MCF2-207ENST00000483690 ACTL7BQ9Y614 415 aa11.29□□□□□ -0.6
MCF2-207ENST00000483690 SLC12A7Q9Y666 1083 aa11.29□□□□□ -0.6
MCF2-207ENST00000483690 A0A1W2PQH9 124 aa11.28□□□□□ -0.6
MCF2-207ENST00000483690 CHURC1-FNTBB4DL54 471 aa11.28□□□□□ -0.6
MCF2-207ENST00000483690 SART1O43290 800 aaKnown RBP11.28□□□□□ -0.6
MCF2-207ENST00000483690 ALX3O95076 343 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms